RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 ABCA4P78363 2273 aa12.43□□□□□ -0.42
UBAP1-201ENST00000297661 PPIAL4EA0A075B759 164 aa12.43□□□□□ -0.42
UBAP1-201ENST00000297661 COX7A2P2O60397 106 aa12.43□□□□□ -0.42
UBAP1-201ENST00000297661 NCR2O95944 276 aa12.43□□□□□ -0.42
UBAP1-201ENST00000297661 PPIAL4FP0DN26 164 aa12.43□□□□□ -0.42
UBAP1-201ENST00000297661 PATE2Q6UY27 113 aa12.43□□□□□ -0.42
UBAP1-201ENST00000297661 OR5AN1Q8NGI8 311 aa12.43□□□□□ -0.42
UBAP1-201ENST00000297661 VSTM2AQ8TAG5 236 aa12.43□□□□□ -0.42
UBAP1-201ENST00000297661 SOX21Q9Y651 276 aaPredicted RBP12.43□□□□□ -0.42
UBAP1-201ENST00000297661 NEU4Q8WWR8 484 aaPredicted RBP12.43□□□□□ -0.42
UBAP1-201ENST00000297661 ASH1LQ9NR48 2969 aaKnown RBP12.42□□□□□ -0.42
UBAP1-201ENST00000297661 PRSS47A8MTI9 375 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 TMEM178BH3BS89 294 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 ORM2P19652 201 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 C3orf36Q3SXR2 165 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 NUP37Q8NFH4 326 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 OR5A1Q8NGJ0 315 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 BLNKQ8WV28 456 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 ZNF747Q9BV97 191 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 HELZ2Q9BYK8 2649 aaKnown RBP12.42□□□□□ -0.42
UBAP1-201ENST00000297661 MALRD1Q5VYJ5 2156 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 P01737 135 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 SMIM17P0DL12 118 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 AZU1P20160 251 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 CNTFRP26992 372 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 PRSS22Q9GZN4 317 aa12.42□□□□□ -0.42
UBAP1-201ENST00000297661 A0A1W2PPM0 123 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 NDUFB3O43676 98 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 RPL24P83731 157 aaKnown RBP12.41□□□□□ -0.42
UBAP1-201ENST00000297661 TMEM177Q53S58 311 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 C10orf113Q5VZT2 155 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 TMEM116Q8NCL8 245 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 OR4C13Q8NGP0 309 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 PERPQ96FX8 193 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 GPR82Q96P67 336 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 GTSF1LQ9H1H1 148 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 USP9XQ93008 2570 aaPredicted RBP12.41□□□□□ -0.42
UBAP1-201ENST00000297661 IGKV1D-37A0A075B6S9 117 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 LYNX1G3V0Z9 82 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 IGLV2-23P01705 113 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 SLC25A5P05141 298 aaKnown RBP12.41□□□□□ -0.42
UBAP1-201ENST00000297661 LYNX1P0DP58 116 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 MEF2CQ06413 473 aaPredicted RBP12.41□□□□□ -0.42
UBAP1-201ENST00000297661 PRSS57Q6UWY2 283 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 RBPMS2Q6ZRY4 209 aaKnown RBP12.41□□□□□ -0.42
UBAP1-201ENST00000297661 FXYD5Q96DB9 178 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 EPDR1Q9UM22 224 aa12.41□□□□□ -0.42
UBAP1-201ENST00000297661 A0A1W2PPI3 338 aa12.4□□□□□ -0.42
UBAP1-201ENST00000297661 TCTAP57738 103 aa12.4□□□□□ -0.42
UBAP1-201ENST00000297661 AP5S1Q9NUS5 200 aa12.4□□□□□ -0.42
UBAP1-201ENST00000297661 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.4□□□□□ -0.42
UBAP1-201ENST00000297661 PRRG2O14669 202 aa12.4□□□□□ -0.42
UBAP1-201ENST00000297661 GNLYP22749 145 aa12.4□□□□□ -0.42
UBAP1-201ENST00000297661 SMAGPQ0VAQ4 97 aa12.4□□□□□ -0.42
UBAP1-201ENST00000297661 Q5PR19 223 aa12.4□□□□□ -0.42
UBAP1-201ENST00000297661 C16orf54Q6UWD8 224 aa12.4□□□□□ -0.42
UBAP1-201ENST00000297661 MLST8Q9BVC4 326 aa12.4□□□□□ -0.42
UBAP1-201ENST00000297661 PPIAL4CA0A0B4J2A2 164 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 TEX48A0A1B0GUV7 120 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 APOHP02749 345 aaPredicted RBP12.39□□□□□ -0.43
UBAP1-201ENST00000297661 LOXP28300 417 aaPredicted RBP12.39□□□□□ -0.43
UBAP1-201ENST00000297661 HSD52Q0P140 79 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 CT83Q5H943 113 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 LINC00305Q7Z4B0 112 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 TMEM167AQ8TBQ9 72 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 THYN1Q9P016 225 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 LRRK2Q5S007 2527 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 MYCNOSP40205 109 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 BOD1L2Q8IYS8 172 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 IGFBPL1Q8WX77 278 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 DYNLRB1Q9NP97 96 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 TMEM238LA0A1B0GVL6 79 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 A1L4Q6 167 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 C22orf46C9J442 243 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 CACNG8Q8WXS5 425 aa12.39□□□□□ -0.43
UBAP1-201ENST00000297661 C19orf71A6NCJ1 209 aa12.38□□□□□ -0.43
UBAP1-201ENST00000297661 PGPA6NDG6 321 aa12.38□□□□□ -0.43
UBAP1-201ENST00000297661 PDPNQ86YL7 162 aa12.38□□□□□ -0.43
UBAP1-201ENST00000297661 SIGMAR1Q99720 223 aa12.38□□□□□ -0.43
UBAP1-201ENST00000297661 KLF12Q9Y4X4 402 aa12.38□□□□□ -0.43
UBAP1-201ENST00000297661 TCRBV4S1A1TA0A5B7 111 aa12.38□□□□□ -0.43
UBAP1-201ENST00000297661 SCGB1A1P11684 91 aa12.38□□□□□ -0.43
UBAP1-201ENST00000297661 CSN1S1P47710 185 aa12.38□□□□□ -0.43
UBAP1-201ENST00000297661 DPF1Q92782 380 aa12.38□□□□□ -0.43
UBAP1-201ENST00000297661 DAZAP1Q96EP5 407 aaKnown RBP12.38□□□□□ -0.43
UBAP1-201ENST00000297661 SMPXQ9UHP9 88 aa12.38□□□□□ -0.43
UBAP1-201ENST00000297661 TENM4Q6N022 2769 aa12.37□□□□□ -0.43
UBAP1-201ENST00000297661 SMAD7O15105 426 aaKnown RBP12.37□□□□□ -0.43
UBAP1-201ENST00000297661 FABP2P12104 132 aa12.37□□□□□ -0.43
UBAP1-201ENST00000297661 MRGPRG-AS1Q2M3A8 158 aa12.37□□□□□ -0.43
UBAP1-201ENST00000297661 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
UBAP1-201ENST00000297661 OR8A1Q8NGG7 326 aa12.37□□□□□ -0.43
UBAP1-201ENST00000297661 GFRA4Q9GZZ7 299 aa12.37□□□□□ -0.43
UBAP1-201ENST00000297661 ADAMTSL5Q6ZMM2 481 aa12.37□□□□□ -0.43
UBAP1-201ENST00000297661 OR1L4Q8NGR5 311 aa12.37□□□□□ -0.43
UBAP1-201ENST00000297661 RNASE6Q93091 150 aaKnown RBP12.37□□□□□ -0.43
UBAP1-201ENST00000297661 GCN1Q92616 2671 aaKnown RBP12.36□□□□□ -0.43
UBAP1-201ENST00000297661 TMEM30BQ3MIR4 351 aa12.36□□□□□ -0.43
UBAP1-201ENST00000297661 OR9G4Q8NGQ1 327 aa12.36□□□□□ -0.43
UBAP1-201ENST00000297661 ZNF492Q9P255 531 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms