RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 ANXA7P20073 488 aaKnown RBP13.79□□□□□ -0.2
CXCL3-201ENST00000296026 TRIQKQ629K1 86 aa13.79□□□□□ -0.2
CXCL3-201ENST00000296026 TMEM256Q8N2U0 113 aa13.79□□□□□ -0.2
CXCL3-201ENST00000296026 OR10P1Q8NGE3 313 aa13.79□□□□□ -0.2
CXCL3-201ENST00000296026 ARV1Q9H2C2 271 aa13.79□□□□□ -0.2
CXCL3-201ENST00000296026 MGAT4CQ9UBM8 478 aa13.79□□□□□ -0.2
CXCL3-201ENST00000296026 FNDC10F2Z333 226 aa13.78□□□□□ -0.2
CXCL3-201ENST00000296026 K7EPK0 472 aa13.78□□□□□ -0.2
CXCL3-201ENST00000296026 ATP5G1P05496 136 aa13.78□□□□□ -0.2
CXCL3-201ENST00000296026 HTN1P15515 57 aa13.78□□□□□ -0.2
CXCL3-201ENST00000296026 ATP5G3P48201 142 aa13.78□□□□□ -0.2
CXCL3-201ENST00000296026 SLC38A11Q08AI6 406 aa13.78□□□□□ -0.2
CXCL3-201ENST00000296026 C4orf46Q504U0 113 aa13.78□□□□□ -0.2
CXCL3-201ENST00000296026 TEPPQ6URK8 271 aa13.78□□□□□ -0.2
CXCL3-201ENST00000296026 RPUSD4Q96CM3 377 aaKnown RBP13.78□□□□□ -0.2
CXCL3-201ENST00000296026 LINC00854A0A1B0GVQ3 168 aa13.77□□□□□ -0.21
CXCL3-201ENST00000296026 MRPS12O15235 138 aaKnown RBP13.77□□□□□ -0.21
CXCL3-201ENST00000296026 NUDT3O95989 172 aa13.77□□□□□ -0.21
CXCL3-201ENST00000296026 PKHD1P08F94 4074 aa13.77□□□□□ -0.21
CXCL3-201ENST00000296026 TAS2R60P59551 318 aa13.77□□□□□ -0.21
CXCL3-201ENST00000296026 IAH1Q2TAA2 248 aaPredicted RBP13.77□□□□□ -0.21
CXCL3-201ENST00000296026 ZNF575Q86XF7 245 aa13.77□□□□□ -0.21
CXCL3-201ENST00000296026 RNF24Q9Y225 148 aa13.77□□□□□ -0.21
CXCL3-201ENST00000296026 PKD1P98161 4303 aa13.76□□□□□ -0.21
CXCL3-201ENST00000296026 CBY3A6NI87 242 aa13.76□□□□□ -0.21
CXCL3-201ENST00000296026 GOSR2O14653 212 aa13.76□□□□□ -0.21
CXCL3-201ENST00000296026 TSC22D2O75157 780 aa13.76□□□□□ -0.21
CXCL3-201ENST00000296026 CDKN1BP46527 198 aa13.76□□□□□ -0.21
CXCL3-201ENST00000296026 TAS2R30P59541 319 aa13.76□□□□□ -0.21
CXCL3-201ENST00000296026 PXDC1Q5TGL8 231 aa13.76□□□□□ -0.21
CXCL3-201ENST00000296026 C16orf74Q96GX8 76 aa13.76□□□□□ -0.21
CXCL3-201ENST00000296026 RBM38Q9H0Z9 239 aaKnown RBP13.76□□□□□ -0.21
CXCL3-201ENST00000296026 GSKIPQ9P0R6 139 aa13.76□□□□□ -0.21
CXCL3-201ENST00000296026 AGPAT2O15120 278 aa13.75□□□□□ -0.21
CXCL3-201ENST00000296026 SNRPCP09234 159 aaKnown RBP13.75□□□□□ -0.21
CXCL3-201ENST00000296026 CXCL2P19875 107 aa13.75□□□□□ -0.21
CXCL3-201ENST00000296026 ARL16Q0P5N6 197 aa13.75□□□□□ -0.21
CXCL3-201ENST00000296026 LCN15Q6UWW0 184 aa13.75□□□□□ -0.21
CXCL3-201ENST00000296026 LINC00305Q7Z4B0 112 aa13.75□□□□□ -0.21
CXCL3-201ENST00000296026 ZNF546Q86UE3 836 aa13.75□□□□□ -0.21
CXCL3-201ENST00000296026 ZBTB8BQ8NAP8 495 aaPredicted RBP13.75□□□□□ -0.21
CXCL3-201ENST00000296026 ZNF331Q9NQX6 463 aaPredicted RBP13.75□□□□□ -0.21
CXCL3-201ENST00000296026 RCL1Q9Y2P8 373 aaKnown RBP13.75□□□□□ -0.21
CXCL3-201ENST00000296026 TIMM8BQ9Y5J9 83 aaPredicted RBP13.75□□□□□ -0.21
CXCL3-201ENST00000296026 BTCP35070 178 aa13.74□□□□□ -0.21
CXCL3-201ENST00000296026 ZNRF2Q8NHG8 242 aa13.74□□□□□ -0.21
CXCL3-201ENST00000296026 SLC50A1Q9BRV3 221 aa13.74□□□□□ -0.21
CXCL3-201ENST00000296026 NBDYA0A0U1RRE5 68 aa13.73□□□□□ -0.21
CXCL3-201ENST00000296026 CENPXA8MT69 81 aa13.73□□□□□ -0.21
CXCL3-201ENST00000296026 ZNF493Q6ZR52 646 aa13.73□□□□□ -0.21
CXCL3-201ENST00000296026 BPIFA4PQ86YQ2 179 aa13.73□□□□□ -0.21
CXCL3-201ENST00000296026 RNASE8Q8TDE3 154 aaKnown RBP13.73□□□□□ -0.21
CXCL3-201ENST00000296026 MITD1Q8WV92 249 aa13.73□□□□□ -0.21
CXCL3-201ENST00000296026 SDHCQ99643 169 aaPredicted RBP13.73□□□□□ -0.21
CXCL3-201ENST00000296026 NOP10Q9NPE3 64 aaKnown RBP13.73□□□□□ -0.21
CXCL3-201ENST00000296026 DYNC1H1Q14204 4646 aaKnown RBP13.72□□□□□ -0.21
CXCL3-201ENST00000296026 C7orf66A4D0T2 115 aa13.72□□□□□ -0.21
CXCL3-201ENST00000296026 H7BYZ3 331 aa13.72□□□□□ -0.21
CXCL3-201ENST00000296026 COX7A2P2O60397 106 aa13.72□□□□□ -0.21
CXCL3-201ENST00000296026 MBPP02686 304 aaPredicted RBP13.72□□□□□ -0.21
CXCL3-201ENST00000296026 CCL18P55774 89 aa13.72□□□□□ -0.21
CXCL3-201ENST00000296026 TNP2Q05952 138 aa13.72□□□□□ -0.21
CXCL3-201ENST00000296026 KIR3DS1Q14943 382 aa13.72□□□□□ -0.21
CXCL3-201ENST00000296026 TMEM263Q8WUH6 116 aaKnown RBP13.72□□□□□ -0.21
CXCL3-201ENST00000296026 RNF141Q8WVD5 230 aa13.72□□□□□ -0.21
CXCL3-201ENST00000296026 GGACTQ9BVM4 153 aa13.72□□□□□ -0.21
CXCL3-201ENST00000296026 PARD6GQ9BYG4 376 aaPredicted RBP13.72□□□□□ -0.21
CXCL3-201ENST00000296026 MUC4Q99102 2169 aa13.72□□□□□ -0.21
CXCL3-201ENST00000296026 DNAH11Q96DT5 4516 aa13.71□□□□□ -0.21
CXCL3-201ENST00000296026 H3BTX0 84 aa13.71□□□□□ -0.21
CXCL3-201ENST00000296026 ZNF701M0R085 212 aaPredicted RBP13.71□□□□□ -0.21
CXCL3-201ENST00000296026 MORN5Q5VZ52 161 aa13.71□□□□□ -0.21
CXCL3-201ENST00000296026 TMEM37Q8WXS4 190 aa13.71□□□□□ -0.21
CXCL3-201ENST00000296026 MGST2Q99735 147 aa13.71□□□□□ -0.21
CXCL3-201ENST00000296026 C20orf144Q9BQM9 153 aa13.71□□□□□ -0.21
CXCL3-201ENST00000296026 LINC00588Q9Y4M8 146 aa13.71□□□□□ -0.21
CXCL3-201ENST00000296026 PRAC2D3DTV9 90 aa13.7□□□□□ -0.22
CXCL3-201ENST00000296026 SLC17A3O00476 420 aa13.7□□□□□ -0.22
CXCL3-201ENST00000296026 C10orf113Q5VZT2 155 aa13.7□□□□□ -0.22
CXCL3-201ENST00000296026 C6orf223Q8N319 242 aa13.7□□□□□ -0.22
CXCL3-201ENST00000296026 OR10J6PQ8NGY7 276 aa13.7□□□□□ -0.22
CXCL3-201ENST00000296026 L7N2F9 121 aa13.69□□□□□ -0.22
CXCL3-201ENST00000296026 CCSO14618 274 aa13.69□□□□□ -0.22
CXCL3-201ENST00000296026 IL7P13232 177 aa13.69□□□□□ -0.22
CXCL3-201ENST00000296026 VAMP2P63027 116 aa13.69□□□□□ -0.22
CXCL3-201ENST00000296026 CLINT1Q14677 625 aa13.69□□□□□ -0.22
CXCL3-201ENST00000296026 OPCMLQ14982 345 aa13.69□□□□□ -0.22
CXCL3-201ENST00000296026 CNPY1Q3B7I2 92 aa13.69□□□□□ -0.22
CXCL3-201ENST00000296026 GFI1BQ5VTD9 330 aa13.69□□□□□ -0.22
CXCL3-201ENST00000296026 IGLC2P0DOY2 106 aa13.68□□□□□ -0.22
CXCL3-201ENST00000296026 OR5I1Q13606 314 aa13.68□□□□□ -0.22
CXCL3-201ENST00000296026 ZNF846Q147U1 533 aa13.68□□□□□ -0.22
CXCL3-201ENST00000296026 SSX7Q7RTT5 188 aa13.68□□□□□ -0.22
CXCL3-201ENST00000296026 CCDC28AQ8IWP9 274 aa13.68□□□□□ -0.22
CXCL3-201ENST00000296026 PXMP4Q9Y6I8 212 aa13.68□□□□□ -0.22
CXCL3-201ENST00000296026 H3BQ15 152 aa13.67□□□□□ -0.22
CXCL3-201ENST00000296026 CAMLGP49069 296 aa13.67□□□□□ -0.22
CXCL3-201ENST00000296026 Q6ZRG5 221 aa13.67□□□□□ -0.22
CXCL3-201ENST00000296026 LINC00612Q8N6U2 182 aa13.67□□□□□ -0.22
CXCL3-201ENST00000296026 SAT2Q96F10 170 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms