RNA–Protein interactions for RNA: ENST00000293683.9

PDE4A-201, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-201ENST00000293683 PET117Q6UWS5 81 aa13.66□□□□□ -0.22
PDE4A-201ENST00000293683 RPEQ96AT9 228 aa13.66□□□□□ -0.22
PDE4A-201ENST00000293683 AP5S1Q9NUS5 200 aa13.66□□□□□ -0.22
PDE4A-201ENST00000293683 RALYQ9UKM9 306 aaKnown RBP13.66□□□□□ -0.22
PDE4A-201ENST00000293683 PSG8Q9UQ74 426 aa13.66□□□□□ -0.22
PDE4A-201ENST00000293683 TMSB15BA0A087X1C1 80 aa13.66□□□□□ -0.22
PDE4A-201ENST00000293683 SHANK2-AS3Q9BTD1 123 aa13.66□□□□□ -0.22
PDE4A-201ENST00000293683 CNIH1O95406 144 aa13.65□□□□□ -0.22
PDE4A-201ENST00000293683 HLA-DRB1P01911 266 aa13.65□□□□□ -0.22
PDE4A-201ENST00000293683 PAX2Q02962 417 aa13.65□□□□□ -0.22
PDE4A-201ENST00000293683 HSPB8Q9UJY1 196 aa13.65□□□□□ -0.22
PDE4A-201ENST00000293683 ASH1LQ9NR48 2969 aaKnown RBP13.65□□□□□ -0.22
PDE4A-201ENST00000293683 IL4P05112 153 aa13.65□□□□□ -0.22
PDE4A-201ENST00000293683 TCTAP57738 103 aa13.65□□□□□ -0.22
PDE4A-201ENST00000293683 FXYD7P58549 80 aa13.65□□□□□ -0.22
PDE4A-201ENST00000293683 BPIFA4PQ86YQ2 179 aa13.65□□□□□ -0.22
PDE4A-201ENST00000293683 H3BRN7 92 aa13.64□□□□□ -0.23
PDE4A-201ENST00000293683 LINC01545Q5VT33 79 aa13.64□□□□□ -0.23
PDE4A-201ENST00000293683 TMEM75Q8N9X5 138 aa13.64□□□□□ -0.23
PDE4A-201ENST00000293683 ZNF747Q9BV97 191 aa13.64□□□□□ -0.23
PDE4A-201ENST00000293683 SCNM1Q9BWG6 230 aa13.64□□□□□ -0.23
PDE4A-201ENST00000293683 LOC389332A0A1B0GUA5 103 aa13.64□□□□□ -0.23
PDE4A-201ENST00000293683 K7EP13 123 aa13.64□□□□□ -0.23
PDE4A-201ENST00000293683 IFI27P40305 119 aaPredicted RBP13.64□□□□□ -0.23
PDE4A-201ENST00000293683 ARF6P62330 175 aa13.64□□□□□ -0.23
PDE4A-201ENST00000293683 PSG3Q16557 428 aa13.64□□□□□ -0.23
PDE4A-201ENST00000293683 PRR30Q53SZ7 412 aaPredicted RBP13.64□□□□□ -0.23
PDE4A-201ENST00000293683 ZNF491Q8N8L2 437 aa13.64□□□□□ -0.23
PDE4A-201ENST00000293683 TMEM213A2RRL7 107 aa13.63□□□□□ -0.23
PDE4A-201ENST00000293683 TIMM23O14925 209 aa13.63□□□□□ -0.23
PDE4A-201ENST00000293683 FCGR2BP31994 310 aaPredicted RBP13.63□□□□□ -0.23
PDE4A-201ENST00000293683 RIGQ13278 110 aa13.63□□□□□ -0.23
PDE4A-201ENST00000293683 DEFB125Q8N687 156 aa13.63□□□□□ -0.23
PDE4A-201ENST00000293683 TNFRSF14Q92956 283 aa13.63□□□□□ -0.23
PDE4A-201ENST00000293683 RNF125Q96EQ8 232 aa13.63□□□□□ -0.23
PDE4A-201ENST00000293683 ABHD17AQ96GS6 310 aa13.63□□□□□ -0.23
PDE4A-201ENST00000293683 JKAMPQ9P055 326 aa13.63□□□□□ -0.23
PDE4A-201ENST00000293683 RNF24Q9Y225 148 aa13.63□□□□□ -0.23
PDE4A-201ENST00000293683 TLN1Q9Y490 2541 aaKnown RBP13.63□□□□□ -0.23
PDE4A-201ENST00000293683 A0A096LNJ9 63 aa13.63□□□□□ -0.23
PDE4A-201ENST00000293683 GFRALQ6UXV0 394 aa13.63□□□□□ -0.23
PDE4A-201ENST00000293683 PRSS3P2Q8NHM4 247 aa13.63□□□□□ -0.23
PDE4A-201ENST00000293683 PPIAL4CA0A0B4J2A2 164 aa13.62□□□□□ -0.23
PDE4A-201ENST00000293683 MRPS12O15235 138 aaKnown RBP13.62□□□□□ -0.23
PDE4A-201ENST00000293683 PPIAL4GP0DN37 164 aa13.62□□□□□ -0.23
PDE4A-201ENST00000293683 ZNF414Q96IQ9 312 aa13.62□□□□□ -0.23
PDE4A-201ENST00000293683 SERTM2A0A1B0GWG4 89 aa13.62□□□□□ -0.23
PDE4A-201ENST00000293683 C2orf91Q6ZV80 131 aa13.62□□□□□ -0.23
PDE4A-201ENST00000293683 FA2HQ7L5A8 372 aa13.62□□□□□ -0.23
PDE4A-201ENST00000293683 HILPDAQ9Y5L2 63 aa13.62□□□□□ -0.23
PDE4A-201ENST00000293683 TRAV30A0A087WSZ9 112 aa13.61□□□□□ -0.23
PDE4A-201ENST00000293683 D6R8Y8 96 aa13.61□□□□□ -0.23
PDE4A-201ENST00000293683 RNF151Q2KHN1 245 aa13.61□□□□□ -0.23
PDE4A-201ENST00000293683 AMMECR1LQ6DCA0 310 aa13.61□□□□□ -0.23
PDE4A-201ENST00000293683 PIP4P2Q8N4L2 257 aa13.61□□□□□ -0.23
PDE4A-201ENST00000293683 Q8NA96 180 aa13.61□□□□□ -0.23
PDE4A-201ENST00000293683 OR8A1Q8NGG7 326 aa13.61□□□□□ -0.23
PDE4A-201ENST00000293683 TRBV6-1A0A0K0K1D8 114 aa13.61□□□□□ -0.23
PDE4A-201ENST00000293683 VSTM5A8MXK1 200 aa13.61□□□□□ -0.23
PDE4A-201ENST00000293683 AMN1Q8IY45 258 aa13.61□□□□□ -0.23
PDE4A-201ENST00000293683 ONECUT1Q9UBC0 465 aa13.61□□□□□ -0.23
PDE4A-201ENST00000293683 LYZL1Q6UWQ5 148 aa13.6□□□□□ -0.23
PDE4A-201ENST00000293683 C12orf54Q6X4T0 127 aa13.6□□□□□ -0.23
PDE4A-201ENST00000293683 LY6HO94772 140 aa13.6□□□□□ -0.23
PDE4A-201ENST00000293683 OR10AG1Q8NH19 301 aa13.6□□□□□ -0.23
PDE4A-201ENST00000293683 CEP295Q9C0D2 2601 aa13.6□□□□□ -0.23
PDE4A-201ENST00000293683 LY6LH3BQJ8 138 aa13.59□□□□□ -0.23
PDE4A-201ENST00000293683 GPR183P32249 361 aa13.59□□□□□ -0.23
PDE4A-201ENST00000293683 RHOGP84095 191 aa13.59□□□□□ -0.23
PDE4A-201ENST00000293683 HIST1H1AQ02539 215 aaPredicted RBP13.59□□□□□ -0.23
PDE4A-201ENST00000293683 ANKRD39Q53RE8 183 aa13.59□□□□□ -0.23
PDE4A-201ENST00000293683 MS4A6AQ9H2W1 248 aa13.59□□□□□ -0.23
PDE4A-201ENST00000293683 SIGLEC8Q9NYZ4 499 aa13.59□□□□□ -0.23
PDE4A-201ENST00000293683 ANKHD1Q8IWZ3 2542 aaKnown RBP13.59□□□□□ -0.23
PDE4A-201ENST00000293683 IGKV2-40A0A087WW87 121 aaPredicted RBP13.59□□□□□ -0.23
PDE4A-201ENST00000293683 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.59□□□□□ -0.23
PDE4A-201ENST00000293683 K7EQM0 130 aa13.59□□□□□ -0.23
PDE4A-201ENST00000293683 IGKV2D-40P01614 121 aaPredicted RBP13.59□□□□□ -0.23
PDE4A-201ENST00000293683 IGHV3-23P01764 117 aa13.59□□□□□ -0.23
PDE4A-201ENST00000293683 COX8AP10176 69 aa13.59□□□□□ -0.23
PDE4A-201ENST00000293683 PSG9Q00887 426 aa13.59□□□□□ -0.23
PDE4A-201ENST00000293683 CSN1S1P47710 185 aa13.58□□□□□ -0.24
PDE4A-201ENST00000293683 GATD1Q8NB37 220 aa13.58□□□□□ -0.24
PDE4A-201ENST00000293683 TRAV8-6A0A0B4J262 113 aa13.58□□□□□ -0.24
PDE4A-201ENST00000293683 SMKR1H3BMG3 65 aa13.58□□□□□ -0.24
PDE4A-201ENST00000293683 APOBEC3AP31941 199 aaPredicted RBP13.58□□□□□ -0.24
PDE4A-201ENST00000293683 SELENOKQ9Y6D0 94 aa13.58□□□□□ -0.24
PDE4A-201ENST00000293683 WNK2Q9Y3S1 2297 aa13.57□□□□□ -0.24
PDE4A-201ENST00000293683 CT45A10P0DMU9 189 aa13.57□□□□□ -0.24
PDE4A-201ENST00000293683 KLRD1Q13241 179 aa13.57□□□□□ -0.24
PDE4A-201ENST00000293683 IGFL4Q6B9Z1 124 aa13.57□□□□□ -0.24
PDE4A-201ENST00000293683 NBASA2RRP1 2371 aa13.57□□□□□ -0.24
PDE4A-201ENST00000293683 SH2D1AO60880 128 aa13.57□□□□□ -0.24
PDE4A-201ENST00000293683 Q8TAT8 98 aa13.57□□□□□ -0.24
PDE4A-201ENST00000293683 PTPRZ1P23471 2315 aaPredicted RBP13.57□□□□□ -0.24
PDE4A-201ENST00000293683 ZFHX3Q15911 3703 aa13.56□□□□□ -0.24
PDE4A-201ENST00000293683 WI2-2373I1.2A0A1W2PRP0 233 aa13.56□□□□□ -0.24
PDE4A-201ENST00000293683 GNG7O60262 68 aa13.56□□□□□ -0.24
PDE4A-201ENST00000293683 CDKN1BP46527 198 aa13.56□□□□□ -0.24
PDE4A-201ENST00000293683 LINC01560Q8TB33 94 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms