RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 H3BQ15 152 aa19.76■□□□□ 0.75
SSU72-201ENST00000291386 ATP6V0CP27449 155 aa19.76■□□□□ 0.75
SSU72-201ENST00000291386 RPL7L1Q6DKI1 246 aaKnown RBP19.76■□□□□ 0.75
SSU72-201ENST00000291386 MIR17HGQ75NE6 70 aa19.76■□□□□ 0.75
SSU72-201ENST00000291386 ZNF331Q9NQX6 463 aaPredicted RBP19.76■□□□□ 0.75
SSU72-201ENST00000291386 RFNGQ9Y644 331 aa19.76■□□□□ 0.75
SSU72-201ENST00000291386 SPP1P10451 314 aa19.75■□□□□ 0.75
SSU72-201ENST00000291386 M6PRP20645 277 aa19.75■□□□□ 0.75
SSU72-201ENST00000291386 ACOT6Q3I5F7 207 aaPredicted RBP19.75■□□□□ 0.75
SSU72-201ENST00000291386 MORN3Q6PF18 240 aaPredicted RBP19.75■□□□□ 0.75
SSU72-201ENST00000291386 TCTE3Q8IZS6 198 aa19.75■□□□□ 0.75
SSU72-201ENST00000291386 LRRC20Q8TCA0 184 aa19.75■□□□□ 0.75
SSU72-201ENST00000291386 SAT2Q96F10 170 aaPredicted RBP19.75■□□□□ 0.75
SSU72-201ENST00000291386 CLUHP3Q96NS8 147 aa19.75■□□□□ 0.75
SSU72-201ENST00000291386 TP53TG1Q9Y2A0 90 aa19.75■□□□□ 0.75
SSU72-201ENST00000291386 ZNF253O75346 499 aa19.74■□□□□ 0.75
SSU72-201ENST00000291386 HIST1H1EP10412 219 aaKnown RBP19.74■□□□□ 0.75
SSU72-201ENST00000291386 RHOBP62745 196 aa19.74■□□□□ 0.75
SSU72-201ENST00000291386 SERF2P84101 59 aa19.74■□□□□ 0.75
SSU72-201ENST00000291386 KCNRGQ8N5I3 272 aa19.74■□□□□ 0.75
SSU72-201ENST00000291386 ZNF586Q9NXT0 402 aa19.74■□□□□ 0.75
SSU72-201ENST00000291386 CLEC5AQ9NY25 188 aa19.74■□□□□ 0.75
SSU72-201ENST00000291386 JTBO76095 146 aa19.73■□□□□ 0.75
SSU72-201ENST00000291386 GDF5OSQ5U4N7 250 aa19.73■□□□□ 0.75
SSU72-201ENST00000291386 IGFL4Q6B9Z1 124 aa19.73■□□□□ 0.75
SSU72-201ENST00000291386 GNPNAT1Q96EK6 184 aaPredicted RBP19.73■□□□□ 0.75
SSU72-201ENST00000291386 CYTL1Q9NRR1 136 aa19.73■□□□□ 0.75
SSU72-201ENST00000291386 TENM3Q9P273 2699 aa19.73■□□□□ 0.75
SSU72-201ENST00000291386 A0A0J9YX75 114 aa19.72■□□□□ 0.75
SSU72-201ENST00000291386 DEFB1P60022 68 aa19.72■□□□□ 0.75
SSU72-201ENST00000291386 PSG3Q16557 428 aa19.72■□□□□ 0.75
SSU72-201ENST00000291386 TMEM41BQ5BJD5 291 aa19.72■□□□□ 0.75
SSU72-201ENST00000291386 EBLN2Q6P2I7 272 aa19.72■□□□□ 0.75
SSU72-201ENST00000291386 RNF182Q8N6D2 247 aa19.72■□□□□ 0.75
SSU72-201ENST00000291386 OVOL2Q9BRP0 275 aa19.72■□□□□ 0.75
SSU72-201ENST00000291386 OR51M1Q9H341 326 aa19.72■□□□□ 0.75
SSU72-201ENST00000291386 RETNQ9HD89 108 aa19.72■□□□□ 0.75
SSU72-201ENST00000291386 NBEAL2Q6ZNJ1 2754 aa19.71■□□□□ 0.75
SSU72-201ENST00000291386 TRBV19A0A075B6N1 114 aa19.71■□□□□ 0.75
SSU72-201ENST00000291386 A0A0D9SG52 128 aa19.71■□□□□ 0.75
SSU72-201ENST00000291386 SLC17A3O00476 420 aa19.71■□□□□ 0.75
SSU72-201ENST00000291386 PYYP10082 97 aa19.71■□□□□ 0.75
SSU72-201ENST00000291386 PDE6HQ13956 83 aa19.71■□□□□ 0.75
SSU72-201ENST00000291386 RNF183Q96D59 192 aa19.71■□□□□ 0.75
SSU72-201ENST00000291386 A8MTW9 85 aa19.7■□□□□ 0.74
SSU72-201ENST00000291386 MBP02144 154 aa19.7■□□□□ 0.74
SSU72-201ENST00000291386 SNRPCP09234 159 aaKnown RBP19.7■□□□□ 0.74
SSU72-201ENST00000291386 ARPC5LQ9BPX5 153 aa19.7■□□□□ 0.74
SSU72-201ENST00000291386 F6UB75 175 aa19.69■□□□□ 0.74
SSU72-201ENST00000291386 H3BTX0 84 aa19.69■□□□□ 0.74
SSU72-201ENST00000291386 SPRY2O43597 315 aa19.69■□□□□ 0.74
SSU72-201ENST00000291386 CA1P00915 261 aaPredicted RBP19.69■□□□□ 0.74
SSU72-201ENST00000291386 GIG44P09565 113 aaPredicted RBP19.69■□□□□ 0.74
SSU72-201ENST00000291386 HLA-DMBP28068 263 aa19.69■□□□□ 0.74
SSU72-201ENST00000291386 TAS2R45P59539 299 aa19.69■□□□□ 0.74
SSU72-201ENST00000291386 RAB2AP61019 212 aa19.69■□□□□ 0.74
SSU72-201ENST00000291386 NUTF2P61970 127 aaKnown RBP19.69■□□□□ 0.74
SSU72-201ENST00000291386 DEFB135Q30KP9 77 aa19.69■□□□□ 0.74
SSU72-201ENST00000291386 OR10G4Q8NGN3 311 aa19.69■□□□□ 0.74
SSU72-201ENST00000291386 OR10G9Q8NGN4 311 aa19.69■□□□□ 0.74
SSU72-201ENST00000291386 OR10G7Q8NGN6 311 aa19.69■□□□□ 0.74
SSU72-201ENST00000291386 PAXXQ9BUH6 204 aa19.69■□□□□ 0.74
SSU72-201ENST00000291386 hCG_2014768A0A024R1R8 64 aa19.68■□□□□ 0.74
SSU72-201ENST00000291386 KHDC3LQ587J8 217 aa19.68■□□□□ 0.74
SSU72-201ENST00000291386 ZNF738Q8NE65 137 aa19.68■□□□□ 0.74
SSU72-201ENST00000291386 ZNF503Q96F45 646 aa19.68■□□□□ 0.74
SSU72-201ENST00000291386 SH3BGRL3Q9H299 93 aa19.68■□□□□ 0.74
SSU72-201ENST00000291386 STAB2Q8WWQ8 2551 aa19.68■□□□□ 0.74
SSU72-201ENST00000291386 A0A1W2PPV4 95 aa19.67■□□□□ 0.74
SSU72-201ENST00000291386 NDUFB4O95168 129 aa19.67■□□□□ 0.74
SSU72-201ENST00000291386 C4BPBP20851 252 aa19.67■□□□□ 0.74
SSU72-201ENST00000291386 RNF141Q8WVD5 230 aa19.67■□□□□ 0.74
SSU72-201ENST00000291386 FXYD5Q96DB9 178 aa19.67■□□□□ 0.74
SSU72-201ENST00000291386 DUSP14O95147 198 aaKnown RBP19.66■□□□□ 0.74
SSU72-201ENST00000291386 NBEAP1P0C6P0 100 aa19.66■□□□□ 0.74
SSU72-201ENST00000291386 PSG9Q00887 426 aa19.66■□□□□ 0.74
SSU72-201ENST00000291386 AKAP14Q86UN6 197 aa19.66■□□□□ 0.74
SSU72-201ENST00000291386 OR7C2O60412 319 aa19.65■□□□□ 0.74
SSU72-201ENST00000291386 C1QBP02746 253 aa19.65■□□□□ 0.74
SSU72-201ENST00000291386 FAM122CQ6P4D5 195 aa19.65■□□□□ 0.74
SSU72-201ENST00000291386 RPP25LQ8N5L8 163 aaKnown RBP19.65■□□□□ 0.74
SSU72-201ENST00000291386 RPUSD4Q96CM3 377 aaKnown RBP19.65■□□□□ 0.74
SSU72-201ENST00000291386 MRPL53Q96EL3 112 aaKnown RBP19.65■□□□□ 0.74
SSU72-201ENST00000291386 BCL2L11O43521 198 aa19.64■□□□□ 0.73
SSU72-201ENST00000291386 PQLC2Q6ZP29 291 aa19.64■□□□□ 0.73
SSU72-201ENST00000291386 OR4B1Q8NGF8 309 aa19.64■□□□□ 0.73
SSU72-201ENST00000291386 OR8A1Q8NGG7 326 aa19.64■□□□□ 0.73
SSU72-201ENST00000291386 WWC2-AS2Q96NR7 200 aa19.64■□□□□ 0.73
SSU72-201ENST00000291386 C1QTNF4Q9BXJ3 329 aa19.64■□□□□ 0.73
SSU72-201ENST00000291386 KANTRA0A1W2PQU2 76 aa19.63■□□□□ 0.73
SSU72-201ENST00000291386 OR10J4P0C629 311 aa19.63■□□□□ 0.73
SSU72-201ENST00000291386 CDC34P49427 236 aaPredicted RBP19.63■□□□□ 0.73
SSU72-201ENST00000291386 CNN1P51911 297 aaKnown RBP19.63■□□□□ 0.73
SSU72-201ENST00000291386 CSNK1G2-AS1Q8NCQ2 148 aa19.63■□□□□ 0.73
SSU72-201ENST00000291386 BLNKQ8WV28 456 aa19.63■□□□□ 0.73
SSU72-201ENST00000291386 EDA2RQ9HAV5 297 aa19.63■□□□□ 0.73
SSU72-201ENST00000291386 PRELID1Q9Y255 219 aa19.63■□□□□ 0.73
SSU72-201ENST00000291386 AMTNQ6UX39 209 aa19.62■□□□□ 0.73
SSU72-201ENST00000291386 TMUB2Q71RG4 321 aa19.62■□□□□ 0.73
SSU72-201ENST00000291386 A0A1B0GVG6 124 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms