RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 C5orf17Q8NAS9 161 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 GATD1Q8NB37 220 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 RND1Q92730 232 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 TNFRSF14Q92956 283 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 NBPF19A0A087WUL8 3843 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 ANKHD1Q8IWZ3 2542 aaKnown RBP8.29□□□□□ -1.08
SKA1-201ENST00000285116 CRYGBP07316 175 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 GP9P14770 177 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 GNG5P63218 68 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 NEGR1Q7Z3B1 354 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 LINC00305Q7Z4B0 112 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 ABHD17AQ96GS6 310 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 MCRIP2Q9BUT9 160 aaKnown RBP8.29□□□□□ -1.08
SKA1-201ENST00000285116 TMEM14CQ9P0S9 112 aa8.29□□□□□ -1.08
SKA1-201ENST00000285116 TMEM178BH3BS89 294 aa8.28□□□□□ -1.08
SKA1-201ENST00000285116 SLC25A5P05141 298 aaKnown RBP8.28□□□□□ -1.08
SKA1-201ENST00000285116 TMEM108Q6UXF1 575 aa8.28□□□□□ -1.08
SKA1-201ENST00000285116 LHFPL4Q7Z7J7 247 aa8.28□□□□□ -1.08
SKA1-201ENST00000285116 DEFB108BQ8NET1 73 aa8.28□□□□□ -1.08
SKA1-201ENST00000285116 ZNRD1Q9P1U0 126 aa8.28□□□□□ -1.08
SKA1-201ENST00000285116 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.28□□□□□ -1.08
SKA1-201ENST00000285116 A0A1W2PPI3 338 aa8.28□□□□□ -1.08
SKA1-201ENST00000285116 RBPJQ06330 500 aa8.28□□□□□ -1.08
SKA1-201ENST00000285116 RBMXL3Q8N7X1 1067 aaKnown RBP8.28□□□□□ -1.08
SKA1-201ENST00000285116 OR2K2Q8NGT1 345 aa8.28□□□□□ -1.08
SKA1-201ENST00000285116 FAM57AQ8TBR7 257 aa8.28□□□□□ -1.08
SKA1-201ENST00000285116 ZC2HC1AQ96GY0 325 aa8.28□□□□□ -1.08
SKA1-201ENST00000285116 TNCP24821 2201 aa8.28□□□□□ -1.08
SKA1-201ENST00000285116 MOSP00540 346 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 CEACAM3P40198 252 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 ZNF138P52744 262 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 LINC00322Q6ZN03 302 aaPredicted RBP8.27□□□□□ -1.09
SKA1-201ENST00000285116 NEU4Q8WWR8 484 aaPredicted RBP8.27□□□□□ -1.09
SKA1-201ENST00000285116 DAZAP1Q96EP5 407 aaKnown RBP8.27□□□□□ -1.09
SKA1-201ENST00000285116 JMJD8Q96S16 334 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 ZNF747Q9BV97 191 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 MRPL36Q9P0J6 103 aaKnown RBP8.27□□□□□ -1.09
SKA1-201ENST00000285116 PPIAL4EA0A075B759 164 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 H3BUT2 72 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 HAX1O00165 279 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 SMIM17P0DL12 118 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 PPIAL4FP0DN26 164 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 UQCRFS1P47985 274 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 ADIPOQQ15848 244 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 TMEM155Q4W5P6 130 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 OR5A1Q8NGJ0 315 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 OR10AG1Q8NH19 301 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 C8orf46Q8TAG6 207 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 SRSF8Q9BRL6 282 aaKnown RBP8.27□□□□□ -1.09
SKA1-201ENST00000285116 WNK2Q9Y3S1 2297 aa8.27□□□□□ -1.09
SKA1-201ENST00000285116 SETD2Q9BYW2 2564 aaPredicted RBP8.27□□□□□ -1.09
SKA1-201ENST00000285116 A0A0G2JLM5 398 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 PGPA6NDG6 321 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 SNAI2O43623 268 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 FGF6P10767 208 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 CCL3L1P16619 93 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 CSN1S1P47710 185 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 FOXE3Q13461 319 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 WFDC8Q8IUA0 241 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 OR1N2Q8NGR9 330 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 AP5S1Q9NUS5 200 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 JKAMPQ9P055 326 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 DOPEY2Q9Y3R5 2298 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 NDUFB3O43676 98 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 HSD52Q0P140 79 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 SGK494Q96LW2 274 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 OTORQ9NRC9 128 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 RABAC1Q9UI14 185 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 NDUFS8O00217 210 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 PRB1P04280 392 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 TCRAP04437 139 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 LOXP28300 417 aaPredicted RBP8.26□□□□□ -1.09
SKA1-201ENST00000285116 C22orf34Q6ZV56 151 aa8.26□□□□□ -1.09
SKA1-201ENST00000285116 SIVA1O15304 175 aa8.25□□□□□ -1.09
SKA1-201ENST00000285116 CSN3P07498 182 aa8.25□□□□□ -1.09
SKA1-201ENST00000285116 KIR3DS1Q14943 382 aa8.25□□□□□ -1.09
SKA1-201ENST00000285116 OR9G4Q8NGQ1 327 aa8.25□□□□□ -1.09
SKA1-201ENST00000285116 ZANQ9Y493 2812 aa8.25□□□□□ -1.09
SKA1-201ENST00000285116 OVOL3O00110 214 aa8.25□□□□□ -1.09
SKA1-201ENST00000285116 APOHP02749 345 aaPredicted RBP8.25□□□□□ -1.09
SKA1-201ENST00000285116 RBP4P02753 201 aa8.25□□□□□ -1.09
SKA1-201ENST00000285116 FAM27E3Q08E93 113 aa8.25□□□□□ -1.09
SKA1-201ENST00000285116 C10orf55Q5SWW7 151 aa8.25□□□□□ -1.09
SKA1-201ENST00000285116 SAMD13Q5VXD3 122 aa8.25□□□□□ -1.09
SKA1-201ENST00000285116 BOD1L2Q8IYS8 172 aa8.25□□□□□ -1.09
SKA1-201ENST00000285116 RNF5Q99942 180 aa8.25□□□□□ -1.09
SKA1-201ENST00000285116 NPFFR1Q9GZQ6 430 aa8.25□□□□□ -1.09
SKA1-201ENST00000285116 TIMM8BQ9Y5J9 83 aaPredicted RBP8.25□□□□□ -1.09
SKA1-201ENST00000285116 HRNRQ86YZ3 2850 aaPredicted RBP8.24□□□□□ -1.09
SKA1-201ENST00000285116 A0A1B0GW15 77 aa8.24□□□□□ -1.09
SKA1-201ENST00000285116 IGHV1-8P0DP01 117 aa8.24□□□□□ -1.09
SKA1-201ENST00000285116 FA2HQ7L5A8 372 aa8.24□□□□□ -1.09
SKA1-201ENST00000285116 Q86TA4 180 aa8.24□□□□□ -1.09
SKA1-201ENST00000285116 BLNKQ8WV28 456 aa8.24□□□□□ -1.09
SKA1-201ENST00000285116 A0A1W2PPM0 123 aa8.24□□□□□ -1.09
SKA1-201ENST00000285116 A1L4Q6 167 aa8.24□□□□□ -1.09
SKA1-201ENST00000285116 NCR2O95944 276 aa8.24□□□□□ -1.09
SKA1-201ENST00000285116 SCGB1A1P11684 91 aa8.24□□□□□ -1.09
SKA1-201ENST00000285116 RPL27AP46776 148 aaKnown RBP8.24□□□□□ -1.09
SKA1-201ENST00000285116 CCL8P80075 99 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms