RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 NDFIP1Q9BT67 221 aa14.5□□□□□ -0.09
PDLIM3-201ENST00000284767 TIMM23O14925 209 aa14.49□□□□□ -0.09
PDLIM3-201ENST00000284767 OR4C5Q8NGB2 326 aa14.49□□□□□ -0.09
PDLIM3-201ENST00000284767 PGLYRP4Q96LB8 373 aa14.49□□□□□ -0.09
PDLIM3-201ENST00000284767 BBC3Q96PG8 261 aaPredicted RBP14.49□□□□□ -0.09
PDLIM3-201ENST00000284767 CDKN1BP46527 198 aa14.49□□□□□ -0.09
PDLIM3-201ENST00000284767 PVRIGQ6DKI7 326 aa14.49□□□□□ -0.09
PDLIM3-201ENST00000284767 DAZAP1Q96EP5 407 aaKnown RBP14.49□□□□□ -0.09
PDLIM3-201ENST00000284767 BPESC1Q9GZL8 116 aa14.49□□□□□ -0.09
PDLIM3-201ENST00000284767 FBXL15Q9H469 300 aa14.49□□□□□ -0.09
PDLIM3-201ENST00000284767 RPH3ALQ9UNE2 315 aa14.49□□□□□ -0.09
PDLIM3-201ENST00000284767 CELSR2Q9HCU4 2923 aa14.49□□□□□ -0.09
PDLIM3-201ENST00000284767 HSBP1L1C9JCN9 74 aa14.48□□□□□ -0.09
PDLIM3-201ENST00000284767 TCRAP04437 139 aa14.48□□□□□ -0.09
PDLIM3-201ENST00000284767 LGALS7P47929 136 aa14.48□□□□□ -0.09
PDLIM3-201ENST00000284767 EFNA4P52798 201 aa14.48□□□□□ -0.09
PDLIM3-201ENST00000284767 SLC25A34Q6PIV7 304 aa14.48□□□□□ -0.09
PDLIM3-201ENST00000284767 LOC102724200A0A096LPH7 203 aaPredicted RBP14.48□□□□□ -0.09
PDLIM3-201ENST00000284767 GP9P14770 177 aa14.48□□□□□ -0.09
PDLIM3-201ENST00000284767 MPV17L2Q567V2 206 aa14.48□□□□□ -0.09
PDLIM3-201ENST00000284767 RUSC1-AS1Q66K80 236 aa14.48□□□□□ -0.09
PDLIM3-201ENST00000284767 PET117Q6UWS5 81 aa14.48□□□□□ -0.09
PDLIM3-201ENST00000284767 NPIPB6E9PJ23 425 aa14.47□□□□□ -0.09
PDLIM3-201ENST00000284767 M0QZ24 198 aa14.47□□□□□ -0.09
PDLIM3-201ENST00000284767 SIGLEC9Q9Y336 463 aa14.47□□□□□ -0.09
PDLIM3-201ENST00000284767 CHEK1O14757 476 aa14.47□□□□□ -0.09
PDLIM3-201ENST00000284767 HTR1DP28221 377 aa14.47□□□□□ -0.09
PDLIM3-201ENST00000284767 RPS20P60866 119 aaKnown RBP14.47□□□□□ -0.09
PDLIM3-201ENST00000284767 RHOGP84095 191 aa14.47□□□□□ -0.09
PDLIM3-201ENST00000284767 VAMP3Q15836 100 aa14.47□□□□□ -0.09
PDLIM3-201ENST00000284767 ANKRD39Q53RE8 183 aa14.47□□□□□ -0.09
PDLIM3-201ENST00000284767 LINC00173Q6ZV60 143 aa14.47□□□□□ -0.09
PDLIM3-201ENST00000284767 VMO1Q7Z5L0 202 aa14.47□□□□□ -0.09
PDLIM3-201ENST00000284767 MAP1LC3CQ9BXW4 147 aa14.47□□□□□ -0.09
PDLIM3-201ENST00000284767 Q9H3A6 140 aa14.47□□□□□ -0.09
PDLIM3-201ENST00000284767 CRYGBP07316 175 aa14.46□□□□□ -0.09
PDLIM3-201ENST00000284767 C12orf54Q6X4T0 127 aa14.46□□□□□ -0.09
PDLIM3-201ENST00000284767 hDV102S1A0JD36 115 aa14.46□□□□□ -0.09
PDLIM3-201ENST00000284767 HLA-DRB1P01911 266 aa14.46□□□□□ -0.09
PDLIM3-201ENST00000284767 PLP1P60201 277 aa14.46□□□□□ -0.09
PDLIM3-201ENST00000284767 BVES-AS1Q5T3Y7 98 aa14.46□□□□□ -0.09
PDLIM3-201ENST00000284767 DYNAPQ8N1N2 210 aa14.46□□□□□ -0.09
PDLIM3-201ENST00000284767 TMEM116Q8NCL8 245 aa14.46□□□□□ -0.09
PDLIM3-201ENST00000284767 OR11H6Q8NGC7 330 aa14.46□□□□□ -0.09
PDLIM3-201ENST00000284767 MS4A6AQ9H2W1 248 aa14.46□□□□□ -0.09
PDLIM3-201ENST00000284767 HAX1O00165 279 aa14.45□□□□□ -0.1
PDLIM3-201ENST00000284767 PRTN3P24158 256 aa14.45□□□□□ -0.1
PDLIM3-201ENST00000284767 SAPCD1Q5SSQ6 148 aa14.45□□□□□ -0.1
PDLIM3-201ENST00000284767 TEX45Q8NA69 505 aa14.45□□□□□ -0.1
PDLIM3-201ENST00000284767 DPM3Q9P2X0 92 aa14.45□□□□□ -0.1
PDLIM3-201ENST00000284767 HSPB8Q9UJY1 196 aa14.45□□□□□ -0.1
PDLIM3-201ENST00000284767 IGHV3-21A0A0B4J1V1 117 aa14.45□□□□□ -0.1
PDLIM3-201ENST00000284767 TAX1BP3O14907 124 aa14.45□□□□□ -0.1
PDLIM3-201ENST00000284767 IGHV4-39P01824 125 aa14.45□□□□□ -0.1
PDLIM3-201ENST00000284767 PRR31Q5SQ13 230 aa14.45□□□□□ -0.1
PDLIM3-201ENST00000284767 PPP1R27Q86WC6 154 aa14.45□□□□□ -0.1
PDLIM3-201ENST00000284767 SCRT2Q9NQ03 307 aa14.45□□□□□ -0.1
PDLIM3-201ENST00000284767 FAM208BQ5VWN6 2430 aa14.45□□□□□ -0.1
PDLIM3-201ENST00000284767 M0R1W7 72 aa14.44□□□□□ -0.1
PDLIM3-201ENST00000284767 NUDT3O95989 172 aa14.44□□□□□ -0.1
PDLIM3-201ENST00000284767 Q86TA4 180 aa14.44□□□□□ -0.1
PDLIM3-201ENST00000284767 DEFB125Q8N687 156 aa14.44□□□□□ -0.1
PDLIM3-201ENST00000284767 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.44□□□□□ -0.1
PDLIM3-201ENST00000284767 RPL27AP46776 148 aaKnown RBP14.44□□□□□ -0.1
PDLIM3-201ENST00000284767 PAX2Q02962 417 aa14.44□□□□□ -0.1
PDLIM3-201ENST00000284767 GSX1Q9H4S2 264 aaPredicted RBP14.44□□□□□ -0.1
PDLIM3-201ENST00000284767 OTORQ9NRC9 128 aa14.44□□□□□ -0.1
PDLIM3-201ENST00000284767 CENPEQ02224 2701 aa14.44□□□□□ -0.1
PDLIM3-201ENST00000284767 LRRK2Q5S007 2527 aa14.43□□□□□ -0.1
PDLIM3-201ENST00000284767 ODF3BA8MYP8 253 aa14.43□□□□□ -0.1
PDLIM3-201ENST00000284767 OVOL3O00110 214 aa14.43□□□□□ -0.1
PDLIM3-201ENST00000284767 COL8A1P27658 744 aa14.43□□□□□ -0.1
PDLIM3-201ENST00000284767 TMEM190Q8WZ59 177 aa14.43□□□□□ -0.1
PDLIM3-201ENST00000284767 CFHR4Q92496 578 aa14.43□□□□□ -0.1
PDLIM3-201ENST00000284767 APOHP02749 345 aaPredicted RBP14.43□□□□□ -0.1
PDLIM3-201ENST00000284767 PLGLAQ15195 96 aa14.43□□□□□ -0.1
PDLIM3-201ENST00000284767 TP73-AS1Q9UF72 201 aa14.43□□□□□ -0.1
PDLIM3-201ENST00000284767 C16orf54Q6UWD8 224 aa14.42□□□□□ -0.1
PDLIM3-201ENST00000284767 ABCA2Q9BZC7 2435 aa14.42□□□□□ -0.1
PDLIM3-201ENST00000284767 TRBV6-1A0A0K0K1D8 114 aa14.42□□□□□ -0.1
PDLIM3-201ENST00000284767 HOXB4P17483 251 aaPredicted RBP14.42□□□□□ -0.1
PDLIM3-201ENST00000284767 LMO4P61968 165 aa14.42□□□□□ -0.1
PDLIM3-201ENST00000284767 TMEM14CQ9P0S9 112 aa14.42□□□□□ -0.1
PDLIM3-201ENST00000284767 HES1Q14469 280 aa14.41□□□□□ -0.1
PDLIM3-201ENST00000284767 HIGD1AQ9Y241 93 aa14.41□□□□□ -0.1
PDLIM3-201ENST00000284767 HIST1H1AQ02539 215 aaPredicted RBP14.41□□□□□ -0.1
PDLIM3-201ENST00000284767 LINC01545Q5VT33 79 aa14.41□□□□□ -0.1
PDLIM3-201ENST00000284767 TEX22C9J3V5 150 aa14.4□□□□□ -0.1
PDLIM3-201ENST00000284767 SRSF12Q8WXF0 261 aaKnown RBP14.4□□□□□ -0.1
PDLIM3-201ENST00000284767 MUC21A0A0G2JKD1 596 aa14.4□□□□□ -0.1
PDLIM3-201ENST00000284767 MUC21A0A140T8X8 626 aa14.4□□□□□ -0.1
PDLIM3-201ENST00000284767 MUC21Q5SSG8 566 aa14.4□□□□□ -0.1
PDLIM3-201ENST00000284767 GATD1Q8NB37 220 aa14.4□□□□□ -0.1
PDLIM3-201ENST00000284767 NRGNQ92686 78 aa14.4□□□□□ -0.1
PDLIM3-201ENST00000284767 SIRPDQ9H106 197 aa14.4□□□□□ -0.1
PDLIM3-201ENST00000284767 H3BTX0 84 aa14.39□□□□□ -0.11
PDLIM3-201ENST00000284767 CD5LO43866 347 aa14.39□□□□□ -0.11
PDLIM3-201ENST00000284767 TOX4O94842 621 aa14.39□□□□□ -0.11
PDLIM3-201ENST00000284767 CIARTQ8N365 385 aaPredicted RBP14.39□□□□□ -0.11
PDLIM3-201ENST00000284767 ARL6IP6Q8N6S5 226 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms