RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 SAMD5Q5TGI4 173 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 LSM4Q9Y4Z0 139 aaKnown RBP3.33□□□□□ -1.88
SCN3A-201ENST00000283254 C22orf46C9J442 243 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 MRPL52Q86TS9 123 aaKnown RBP3.32□□□□□ -1.88
SCN3A-201ENST00000283254 BPESC1Q9GZL8 116 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 PARP14Q460N5 1801 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 IGKV1D-13A0A0B4J2D9 117 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 K7ENP7 123 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 IGKV1-13P0DP09 117 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 CD300CQ08708 224 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 FOXF2Q12947 444 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 THAP8Q8NA92 274 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 VWCEQ96DN2 955 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 WFDC6Q9BQY6 131 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 RNASE7Q9H1E1 156 aaKnown RBP3.32□□□□□ -1.88
SCN3A-201ENST00000283254 TP53BP1Q12888 1972 aaPredicted RBP3.32□□□□□ -1.88
SCN3A-201ENST00000283254 IGHV1-69DA0A0B4J2H0 117 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 A0A1B0GW64 132 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 MLNRO43193 412 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 IGHV1-69P01742 117 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 RPL23P62829 140 aaKnown RBP3.32□□□□□ -1.88
SCN3A-201ENST00000283254 Q86TA4 180 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 GGNQ86UU5 652 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 C14orf178Q8N769 122 aaPredicted RBP3.32□□□□□ -1.88
SCN3A-201ENST00000283254 C14orf144Q96I85 54 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 COL11A2P13942 1736 aaPredicted RBP3.32□□□□□ -1.88
SCN3A-201ENST00000283254 COL11A1P12107 1806 aaPredicted RBP3.32□□□□□ -1.88
SCN3A-201ENST00000283254 DOCK4Q8N1I0 1966 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 TRBV24-1A0A075B6N3 115 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 A8MXK9 166 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 D6R8Y8 96 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 CTSBP07858 339 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 SUMO4Q6EEV6 95 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 ZFAND6Q6FIF0 208 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 CITED1Q99966 193 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 RALGAPA2Q2PPJ7 1873 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 LYNX1G3V0Z9 82 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 SOCS3O14543 225 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 MMP23AO75900 390 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 LYNX1P0DP58 116 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 CD24P25063 80 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 SYNJ2BPP57105 145 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 TMEM200BQ69YZ2 307 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 MRPL27Q9P0M9 148 aaKnown RBP3.32□□□□□ -1.88
SCN3A-201ENST00000283254 RNF223E7ERA6 249 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 CD5LO43866 347 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 LMO1P25800 156 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 CDKN1BP46527 198 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 TMEM14EPQ6UXP3 125 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 C1orf122Q6ZSJ8 110 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 ZNF48Q96MX3 618 aaPredicted RBP3.32□□□□□ -1.88
SCN3A-201ENST00000283254 NDUFAF3Q9BU61 184 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 UBL5Q9BZL1 73 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 SPANXCQ9NY87 97 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 PSME4Q14997 1843 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 A0A0G2JNJ9 132 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 C2orf82Q6UX34 121 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 C1QL4Q86Z23 238 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 ZNF837Q96EG3 531 aaPredicted RBP3.32□□□□□ -1.88
SCN3A-201ENST00000283254 TMEM243Q9BU79 118 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 CSTL1Q9H114 145 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 Q9UFV3 132 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 USP24Q9UPU5 2620 aa3.32□□□□□ -1.88
SCN3A-201ENST00000283254 IGHV2-70DA0A0C4DH43 119 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 IGKV1-9A0A0C4DH69 117 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 TGFBR3LH3BV60 316 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 I3L3M4 83 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 CR1LQ2VPA4 569 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 BCL6BQ8N143 479 aaPredicted RBP3.31□□□□□ -1.88
SCN3A-201ENST00000283254 FAM19A2Q8N3H0 131 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 BRCA1P38398 1863 aaKnown RBP3.31□□□□□ -1.88
SCN3A-201ENST00000283254 NDUFA4O00483 81 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 UBE2BP63146 152 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 FAM219BQ5XKK7 198 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 C17orf82Q86X59 251 aaPredicted RBP3.31□□□□□ -1.88
SCN3A-201ENST00000283254 TRPM7Q96QT4 1865 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 HIST1H4AP62805 103 aaKnown RBP3.31□□□□□ -1.88
SCN3A-201ENST00000283254 RHOHQ15669 191 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 GFI1BQ5VTD9 330 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 GAFA1Q96PS6 74 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 TRAV8-1A0A0A6YYK1 113 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 A0A0U1RRA0 63 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 LYZL1Q6UWQ5 148 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 ZNF114Q8NC26 417 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 IGKV2-40A0A087WW87 121 aaPredicted RBP3.31□□□□□ -1.88
SCN3A-201ENST00000283254 IGKV2D-40P01614 121 aaPredicted RBP3.31□□□□□ -1.88
SCN3A-201ENST00000283254 C1QCP02747 245 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 CFHR2P36980 270 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 CSRP3P50461 194 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 GAS1P54826 345 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 SP5Q6BEB4 398 aaPredicted RBP3.31□□□□□ -1.88
SCN3A-201ENST00000283254 Q6ZWC4 215 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 IGHV1OR15-1A0A075B7D0 117 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 ESDP10768 282 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 DEFB131AP59861 70 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 C1orf43Q9BWL3 253 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 NRXN2Q9P2S2 1712 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 BOD1L2Q8IYS8 172 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 TMEM75Q8N9X5 138 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 AGMATQ9BSE5 352 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms