RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 CEACAM1P13688 526 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 NBL1P41271 181 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 SRSF7Q16629 238 aaKnown RBP eCLIP7.19□□□□□ -1.26
NIPBL-201ENST00000282516 IGHV3-53P01767 116 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 IGHV1-2P23083 117 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 PDE6HQ13956 83 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 WFDC12Q8WWY7 111 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 ANKHD1Q8IWZ3 2542 aaKnown RBP7.19□□□□□ -1.26
NIPBL-201ENST00000282516 IGHV2-26A0A0B4J1V2 119 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 CD55P08174 381 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 OBSL1O75147 1896 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 C22orf46C9J442 243 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 DEFB121Q5J5C9 76 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 TREML4Q6UXN2 200 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 A0A1W2PPI3 338 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 F8W1H4 67 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 CGB3P0DN86 165 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 IL17RELQ6ZVW7 336 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 IGKV1D-13A0A0B4J2D9 117 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 RFPL3SP0C7P2 107 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 IGKV1-13P0DP09 117 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 KLF5Q13887 457 aaPredicted RBP7.18□□□□□ -1.26
NIPBL-201ENST00000282516 LINC01551Q86U37 167 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 ZNF319Q9P2F9 582 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 A0A1B0GWJ7 208 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 CGB7P0DN87 165 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 CDKN1AP38936 164 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 VMO1Q7Z5L0 202 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 KLHL30-AS1Q8NEE0 82 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 OR11H6Q8NGC7 330 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 MRPS18CQ9Y3D5 142 aaKnown RBP7.18□□□□□ -1.26
NIPBL-201ENST00000282516 A0A087WWL8 130 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 LCN12Q6JVE5 192 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 SCRT1Q9BWW7 348 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 AGRNO00468 2067 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 GAGE12JA6NER3 117 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 FCN3O75636 299 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 GAGE1Q13065 139 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 GAGE4Q13068 117 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 GAGE5Q13069 117 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 GAGE6Q13070 117 aa7.18□□□□□ -1.26
NIPBL-201ENST00000282516 I3L3M4 83 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 GREM1O60565 184 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 CELA3AP09093 270 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 DEFB130BP0DP73 79 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 DEFB130AP0DP74 79 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 Q8TAT8 98 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 SCRT2Q9NQ03 307 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 DAZ1Q9NQZ3 744 aaKnown RBP7.17□□□□□ -1.26
NIPBL-201ENST00000282516 RFNGQ9Y644 331 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 COL5A3P25940 1745 aaPredicted RBP7.17□□□□□ -1.26
NIPBL-201ENST00000282516 MYO9AB2RTY4 2548 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 SHISA9B4DS77 424 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 RSPO4Q2I0M5 234 aaPredicted RBP7.17□□□□□ -1.26
NIPBL-201ENST00000282516 DAD1P61803 113 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 SRSF3P84103 164 aaKnown RBP7.17□□□□□ -1.26
NIPBL-201ENST00000282516 Q86TA4 180 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 WDR83OSQ9Y284 106 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 GREB1LQ9C091 1923 aaPredicted RBP7.17□□□□□ -1.26
NIPBL-201ENST00000282516 FGF16O43320 207 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 TMEM219Q86XT9 240 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 SIGLEC12Q96PQ1 595 aa7.17□□□□□ -1.26
NIPBL-201ENST00000282516 CD24P25063 80 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 BOD1L2Q8IYS8 172 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 C4orf51C9J302 202 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 F5H768 121 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 A0A0G2JMZ2 1700 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 LRRC37A2A6NM11 1700 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 LRRC37AA6NMS7 1700 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 C5orf64Q2M2E5 130 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 FRMPD3Q5JV73 1810 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 LIME1Q9H400 295 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 EML5Q05BV3 1969 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 M0R1W7 72 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 PIP4P2Q8N4L2 257 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 RNF126Q9BV68 326 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 WFDC1Q9HC57 220 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 TP53TG1Q9Y2A0 90 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 KLRD1Q13241 179 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 STPG4Q8N801 248 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 CTSBP07858 339 aa7.16□□□□□ -1.26
NIPBL-201ENST00000282516 TRAV12-1A0A0B4J245 112 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 FXYD7P58549 80 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 TMEM75Q8N9X5 138 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 C3orf79P0CE67 100 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 MP68P56378 58 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 TMEM243Q9BU79 118 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 C9orf118A6NHY6 69 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 B4DSR2 109 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 SMIM10L1P0DMW3 83 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 FUSP35637 526 aaKnown RBP eCLIP7.15□□□□□ -1.26
NIPBL-201ENST00000282516 SMIM10Q96HG1 83 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 ABCA2Q9BZC7 2435 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 PRB3Q04118 309 aaPredicted RBP7.15□□□□□ -1.26
NIPBL-201ENST00000282516 LCNL1Q6ZST4 164 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 MSRB2Q9Y3D2 182 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 KIAA1549Q9HCM3 1950 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 PRSS29PA6NIE9 313 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 K7EP34 96 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 CXCL1P09341 107 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms