RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 GAGE12JA6NER3 117 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 GAGE1Q13065 139 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 GAGE4Q13068 117 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 GAGE5Q13069 117 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 GAGE13Q4V321 117 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 NMSQ5H8A3 153 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 CEP250Q9BV73 2442 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 A0A096LPF7 62 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 GHRHP01286 108 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 RNF5Q99942 180 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 LINC01619G3V211 115 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 RNASE2P10153 161 aaKnown RBP9.61□□□□□ -0.87
SHPRH-201ENST00000275233 C1QTNF4Q9BXJ3 329 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 C15orf62A8K5M9 175 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 VCYO14598 125 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 PRTN3P24158 256 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 SAMD5Q5TGI4 173 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 RASL10AQ92737 203 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 TRAV12-2A0A075B6T6 113 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 MPZP25189 248 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 ATXN8Q156A1 80 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 CYTL1Q9NRR1 136 aa9.61□□□□□ -0.87
SHPRH-201ENST00000275233 SS18Q15532 418 aa9.6□□□□□ -0.87
SHPRH-201ENST00000275233 ZNF479Q96JC4 524 aa9.6□□□□□ -0.87
SHPRH-201ENST00000275233 DAD1P61803 113 aa9.6□□□□□ -0.87
SHPRH-201ENST00000275233 DTX1Q86Y01 620 aa9.6□□□□□ -0.87
SHPRH-201ENST00000275233 A0A1W2PPI3 338 aa9.6□□□□□ -0.87
SHPRH-201ENST00000275233 TMEM238C9JI98 176 aa9.6□□□□□ -0.87
SHPRH-201ENST00000275233 CD5P06127 495 aa9.6□□□□□ -0.87
SHPRH-201ENST00000275233 CR1LQ2VPA4 569 aa9.6□□□□□ -0.87
SHPRH-201ENST00000275233 ZSWIM8A7E2V4 1837 aa9.6□□□□□ -0.87
SHPRH-201ENST00000275233 LINC01551Q86U37 167 aa9.6□□□□□ -0.87
SHPRH-201ENST00000275233 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.59□□□□□ -0.87
SHPRH-201ENST00000275233 CGB3P0DN86 165 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 IGHV1-69DA0A0B4J2H0 117 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 FGF16O43320 207 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 IGHV1-69P01742 117 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 GUSBP1Q15486 140 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 A0A087X0K7 114 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 IGHV3-38A0A0C4DH36 116 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 NDUFB8O95169 186 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 TMEM14EPQ6UXP3 125 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 LINC00587B1AMM8 73 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 GAGE12BA1L429 117 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 A8MWV9 139 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 GAGE7O76087 117 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 GAGE12FP0CL80 117 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 GAGE12GP0CL81 117 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 GAGE12IP0CL82 117 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 LURAP1LQ8IV03 231 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 HIST1H2BLQ99880 126 aa9.59□□□□□ -0.87
SHPRH-201ENST00000275233 PAX9P55771 341 aa9.58□□□□□ -0.88
SHPRH-201ENST00000275233 ZNF48Q96MX3 618 aaPredicted RBP9.58□□□□□ -0.88
SHPRH-201ENST00000275233 SPTBN2O15020 2390 aa9.58□□□□□ -0.88
SHPRH-201ENST00000275233 ARMS2P0C7Q2 107 aa9.58□□□□□ -0.88
SHPRH-201ENST00000275233 Q6ZRM9 215 aa9.58□□□□□ -0.88
SHPRH-201ENST00000275233 TMEM256Q8N2U0 113 aa9.58□□□□□ -0.88
SHPRH-201ENST00000275233 MS4A6AQ9H2W1 248 aa9.58□□□□□ -0.88
SHPRH-201ENST00000275233 J3QKU1 62 aa9.58□□□□□ -0.88
SHPRH-201ENST00000275233 ITGB1BP1O14713 200 aa9.58□□□□□ -0.88
SHPRH-201ENST00000275233 LOC105371267A0A1B0GV96 52 aa9.58□□□□□ -0.88
SHPRH-201ENST00000275233 F8WEM9 126 aa9.58□□□□□ -0.88
SHPRH-201ENST00000275233 BCL6BQ8N143 479 aaPredicted RBP9.58□□□□□ -0.88
SHPRH-201ENST00000275233 TNFSF13O75888 250 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 UBE2E1P51965 193 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 FAM120AOSQ5T036 256 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 PRIMA1Q86XR5 153 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 IGFBPL1Q8WX77 278 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 QRFPP83859 136 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 TRAV8-3A0A0A6YYJ7 113 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 WISP1O95388 367 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 FAM90A2PQ658T7 463 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 PLEKHB2Q96CS7 222 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 LIME1Q9H400 295 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 NDUFS8O00217 210 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 LEPROTO15243 131 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 SPOCK3Q9BQ16 436 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 THSD7BQ9C0I4 1608 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 TMEM213A2RRL7 107 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 AZU1P20160 251 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 ASPHD1Q5U4P2 390 aa9.57□□□□□ -0.88
SHPRH-201ENST00000275233 HELZP42694 1942 aaKnown RBP9.57□□□□□ -0.88
SHPRH-201ENST00000275233 CFHR2P36980 270 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 MTURNQ8N3F0 131 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 TIMM21Q9BVV7 248 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 IGHV2-70DA0A0C4DH43 119 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 AMBPP02760 352 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 HSD52Q0P140 79 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 CLPSL2Q6UWE3 100 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 PRB1P04280 392 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 MGAMO43451 1857 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 TRAV26-2A0A0B4J265 109 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 VWC2LB2RUY7 222 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 TCTEX1D4Q5JR98 221 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 Q86TA4 180 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 SHANK2-AS3Q9BTD1 123 aa9.56□□□□□ -0.88
SHPRH-201ENST00000275233 ZNF561-AS1K7EIQ3 104 aa9.55□□□□□ -0.88
SHPRH-201ENST00000275233 DIDO1Q9BTC0 2240 aaKnown RBP9.55□□□□□ -0.88
SHPRH-201ENST00000275233 PFN2P35080 140 aa9.55□□□□□ -0.88
SHPRH-201ENST00000275233 HIST3H2BBQ8N257 126 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms