RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 CXCL3P19876 107 aa10.35□□□□□ -0.75
HMGN3-201ENST00000275036 CNN1P51911 297 aaKnown RBP10.35□□□□□ -0.75
HMGN3-201ENST00000275036 C12orf74Q32Q52 190 aa10.35□□□□□ -0.75
HMGN3-201ENST00000275036 LGALS9CQ6DKI2 356 aa10.35□□□□□ -0.75
HMGN3-201ENST00000275036 C2CD4CQ8TF44 421 aa10.35□□□□□ -0.75
HMGN3-201ENST00000275036 MARVELD1Q9BSK0 173 aa10.35□□□□□ -0.75
HMGN3-201ENST00000275036 APLNQ9ULZ1 77 aa10.35□□□□□ -0.75
HMGN3-201ENST00000275036 DNAH2Q9P225 4427 aa10.34□□□□□ -0.75
HMGN3-201ENST00000275036 UBE2L5PA0A1B0GUS4 154 aa10.34□□□□□ -0.75
HMGN3-201ENST00000275036 H0YIZ8 118 aa10.34□□□□□ -0.75
HMGN3-201ENST00000275036 COX7A2P2O60397 106 aa10.34□□□□□ -0.75
HMGN3-201ENST00000275036 PRAF2O60831 178 aa10.34□□□□□ -0.75
HMGN3-201ENST00000275036 S100A11P31949 105 aa10.34□□□□□ -0.75
HMGN3-201ENST00000275036 OPCMLQ14982 345 aa10.34□□□□□ -0.75
HMGN3-201ENST00000275036 ZNF738Q8NE65 137 aa10.34□□□□□ -0.75
HMGN3-201ENST00000275036 OR11H7Q8NGC8 314 aa10.34□□□□□ -0.75
HMGN3-201ENST00000275036 OR5AC2Q9NZP5 309 aa10.34□□□□□ -0.75
HMGN3-201ENST00000275036 C11orf94C9JXX5 98 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 H3BTX0 84 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 M0R2Z0 102 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 SLC17A3O00476 420 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 CRXO43186 299 aaPredicted RBP10.33□□□□□ -0.76
HMGN3-201ENST00000275036 NHLH2Q02577 135 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 BAXQ07812 192 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 PSG3Q16557 428 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 SPINK13Q1W4C9 94 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 C10orf113Q5VZT2 155 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 S100A7AQ86SG5 101 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 STX12Q86Y82 276 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 NMES1Q9C002 83 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 DNAJC4Q9NNZ3 241 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 BATF3Q9NR55 127 aa10.33□□□□□ -0.76
HMGN3-201ENST00000275036 TRAV10A0A0B4J240 114 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 TRAV5A0A0B4J249 113 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 SMIM9A6NGZ8 99 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 IGLL5B9A064 214 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 DUSP14O95147 198 aaKnown RBP10.32□□□□□ -0.76
HMGN3-201ENST00000275036 IGLC2P0DOY2 106 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 FGF7P21781 194 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 RPL29P47914 159 aaKnown RBP10.32□□□□□ -0.76
HMGN3-201ENST00000275036 EMP1P54849 157 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 H2BFSP57053 126 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 HBG1P69891 147 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 HBG2P69892 147 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 RAB31Q13636 194 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 LRRC37A5PQ49AS3 106 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 OR8A1Q8NGG7 326 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 IGF2BP2-AS1Q96M15 143 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 ZNF331Q9NQX6 463 aaPredicted RBP10.32□□□□□ -0.76
HMGN3-201ENST00000275036 GOLT1BQ9Y3E0 138 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 HECTD4Q9Y4D8 3996 aa10.32□□□□□ -0.76
HMGN3-201ENST00000275036 H3BQ15 152 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 PRM2P04554 102 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 CXCL2P19875 107 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 B2MP61769 119 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 HIST1H1AQ02539 215 aaPredicted RBP10.31□□□□□ -0.76
HMGN3-201ENST00000275036 ATP6V1FQ16864 119 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 LCN15Q6UWW0 184 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 Q6ZRG5 221 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 BPIFA4PQ86YQ2 179 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 BAP18Q8IXM2 172 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 LRRC20Q8TCA0 184 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 CHAC2Q8WUX2 184 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 SLC39A9Q9NUM3 307 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 RNF24Q9Y225 148 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 RFNGQ9Y644 331 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 PXMP4Q9Y6I8 212 aa10.31□□□□□ -0.76
HMGN3-201ENST00000275036 FAT2Q9NYQ8 4349 aa10.3□□□□□ -0.76
HMGN3-201ENST00000275036 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
HMGN3-201ENST00000275036 E5RGE8 158 aa10.3□□□□□ -0.76
HMGN3-201ENST00000275036 DEFA1P59665 94 aa10.3□□□□□ -0.76
HMGN3-201ENST00000275036 DEFA3P59666 94 aa10.3□□□□□ -0.76
HMGN3-201ENST00000275036 OR5C1Q8NGR4 320 aa10.3□□□□□ -0.76
HMGN3-201ENST00000275036 RPUSD4Q96CM3 377 aaKnown RBP10.3□□□□□ -0.76
HMGN3-201ENST00000275036 SAT2Q96F10 170 aaPredicted RBP10.3□□□□□ -0.76
HMGN3-201ENST00000275036 NPCDR1Q9BY65 106 aa10.3□□□□□ -0.76
HMGN3-201ENST00000275036 PLA2G2EQ9NZK7 142 aa10.3□□□□□ -0.76
HMGN3-201ENST00000275036 DKK2Q9UBU2 259 aa10.3□□□□□ -0.76
HMGN3-201ENST00000275036 IGHV4-4A0A075B6R2 117 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 DEFB131BA0A096LNP1 70 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 LOC102723971A0A1B0GUV8 181 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 TMEM189A5PLL7 270 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 PRAC2D3DTV9 90 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 BOLA2-SMG1P6H3BVE0 249 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 HBE1P02100 147 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 RLN2P04090 185 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 SPART-AS1P0CW21 52 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 TCTAP57738 103 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 GCSAMLQ5JQS6 135 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 FAM222AQ5U5X8 452 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 OR1L4Q8NGR5 311 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 THAP6Q8TBB0 222 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 PPP1R1CQ8WVI7 109 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 PFDN5Q99471 154 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 SLC50A1Q9BRV3 221 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 RNF126Q9BV68 326 aa10.29□□□□□ -0.76
HMGN3-201ENST00000275036 INSP01308 110 aa10.28□□□□□ -0.76
HMGN3-201ENST00000275036 AMBPP02760 352 aa10.28□□□□□ -0.76
HMGN3-201ENST00000275036 RHOBP62745 196 aa10.28□□□□□ -0.76
HMGN3-201ENST00000275036 CYCSP99999 105 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms