RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 IGKV1-6A0A0C4DH72 117 aa9.29□□□□□ -0.92
USP53-201ENST00000274030 A0A1W2PPI3 338 aa9.29□□□□□ -0.92
USP53-201ENST00000274030 DTX2Q86UW9 622 aa9.29□□□□□ -0.92
USP53-201ENST00000274030 ERG28Q9UKR5 140 aa9.29□□□□□ -0.92
USP53-201ENST00000274030 A0A087X0K7 114 aa9.29□□□□□ -0.92
USP53-201ENST00000274030 FHL1Q13642 323 aa9.29□□□□□ -0.92
USP53-201ENST00000274030 SAMD5Q5TGI4 173 aa9.29□□□□□ -0.92
USP53-201ENST00000274030 GGTLC3B5MD39 225 aa9.29□□□□□ -0.92
USP53-201ENST00000274030 BCL6BQ8N143 479 aaPredicted RBP9.29□□□□□ -0.92
USP53-201ENST00000274030 TMEM158Q8WZ71 300 aa9.29□□□□□ -0.92
USP53-201ENST00000274030 TRBV6-6A0A0A6YYG2 114 aa9.29□□□□□ -0.92
USP53-201ENST00000274030 DEFB131AP59861 70 aa9.28□□□□□ -0.92
USP53-201ENST00000274030 MORN3Q6PF18 240 aaPredicted RBP9.28□□□□□ -0.92
USP53-201ENST00000274030 SPAG8Q99932 426 aaPredicted RBP9.28□□□□□ -0.92
USP53-201ENST00000274030 TEX43Q6ZNM6 134 aa9.28□□□□□ -0.92
USP53-201ENST00000274030 LINC00477Q96M19 166 aa9.28□□□□□ -0.92
USP53-201ENST00000274030 REG4Q9BYZ8 158 aa9.28□□□□□ -0.92
USP53-201ENST00000274030 DKK1O94907 266 aa9.28□□□□□ -0.92
USP53-201ENST00000274030 G3V318 75 aa9.28□□□□□ -0.92
USP53-201ENST00000274030 C3orf79P0CE67 100 aa9.28□□□□□ -0.92
USP53-201ENST00000274030 HSD52Q0P140 79 aa9.28□□□□□ -0.92
USP53-201ENST00000274030 Q5PR19 223 aa9.28□□□□□ -0.92
USP53-201ENST00000274030 DOCK11Q5JSL3 2073 aa9.28□□□□□ -0.92
USP53-201ENST00000274030 FAM208BQ5VWN6 2430 aa9.27□□□□□ -0.92
USP53-201ENST00000274030 ZFHX2Q9C0A1 2572 aaPredicted RBP9.27□□□□□ -0.92
USP53-201ENST00000274030 ATP6V0E1O15342 81 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 TNFSF13O75888 250 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 TOMM40O96008 361 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 PRTN3P24158 256 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 Q71RC1 249 aaPredicted RBP9.27□□□□□ -0.93
USP53-201ENST00000274030 A8MWV9 139 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 CFHR3Q02985 330 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 MTURNQ8N3F0 131 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 USMG5Q96IX5 58 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 VCYO14598 125 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 C6orf226Q5I0X4 101 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 SP5Q6BEB4 398 aaPredicted RBP9.27□□□□□ -0.93
USP53-201ENST00000274030 LINC01356Q8N9X3 169 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 SPXQ9BT56 116 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 SLC25A2Q9BXI2 301 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 XCL2Q9UBD3 114 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 MSRB2Q9Y3D2 182 aa9.27□□□□□ -0.93
USP53-201ENST00000274030 ARMS2P0C7Q2 107 aa9.26□□□□□ -0.93
USP53-201ENST00000274030 PTPRDP23468 1912 aa9.26□□□□□ -0.93
USP53-201ENST00000274030 GBF1Q92538 1859 aa9.26□□□□□ -0.93
USP53-201ENST00000274030 GAGE13Q4V321 117 aa9.26□□□□□ -0.93
USP53-201ENST00000274030 ZC2HC1BQ5TFG8 222 aa9.26□□□□□ -0.93
USP53-201ENST00000274030 ZNF625Q96I27 306 aaPredicted RBP9.26□□□□□ -0.93
USP53-201ENST00000274030 DAZ1Q9NQZ3 744 aaKnown RBP9.26□□□□□ -0.93
USP53-201ENST00000274030 ZNF524Q96C55 264 aa9.26□□□□□ -0.93
USP53-201ENST00000274030 TRAV8-4A0A0B4J246 113 aa9.26□□□□□ -0.93
USP53-201ENST00000274030 TMEM238C9JI98 176 aa9.26□□□□□ -0.93
USP53-201ENST00000274030 FOXL2NBQ6ZUU3 175 aa9.26□□□□□ -0.93
USP53-201ENST00000274030 IGHV3-16A0A0C4DH30 117 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 NDUFB8O95169 186 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 Q6ZR03 302 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 VWA8A3KMH1 1905 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 INSP01308 110 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 MPV17L2Q567V2 206 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 SMPXQ9UHP9 88 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 A0A1B0GUS0 222 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 A0A1B0GW64 132 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 TMEM213A2RRL7 107 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 SPINK13Q1W4C9 94 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 Q86TA4 180 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 ZNF503-AS2A6NEH8 195 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 MSMBP08118 114 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 C1orf122Q6ZSJ8 110 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 IL17RELQ6ZVW7 336 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 MS4A6AQ9H2W1 248 aa9.25□□□□□ -0.93
USP53-201ENST00000274030 FAM223BA6NKX1 122 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 ATXN8Q156A1 80 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 TMEM155Q4W5P6 130 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 FAM223AQ8IWN6 122 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 LIME1Q9H400 295 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 C9JQL5 133 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 PSCAO43653 123 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 ADCYAP1P18509 176 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 PYY3Q5JQD4 70 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 FAM90A2PQ658T7 463 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 C8orf49Q96NF6 230 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 SHANK2-AS3Q9BTD1 123 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 SEC11AP67812 179 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 SSBP2P81877 361 aaPredicted RBP9.24□□□□□ -0.93
USP53-201ENST00000274030 KLK9Q9UKQ9 250 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 SYS1-DBNDD2H3BUS1 97 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 K7ENP7 123 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 ZNF562Q6V9R5 426 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 C3orf56Q8N813 242 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 LAMTOR3Q9UHA4 124 aa9.24□□□□□ -0.93
USP53-201ENST00000274030 CMC4P56277 68 aaPredicted RBP9.23□□□□□ -0.93
USP53-201ENST00000274030 ASPHD1Q5U4P2 390 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 STPG4Q8N801 248 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 PROK2Q9HC23 129 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 PTPRQQ9UMZ3 2332 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 SLC25A16P16260 332 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 Q6ZS49 121 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 CYYR1Q96J86 154 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 NOTCH2Q04721 2471 aa9.23□□□□□ -0.93
USP53-201ENST00000274030 TRPM7Q96QT4 1865 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms