RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 MS4A6AQ9H2W1 248 aa21.74■■□□□ 1.07
CBX4-201ENST00000269397 CST9LQ9H4G1 147 aa21.74■■□□□ 1.07
CBX4-201ENST00000269397 TMEM14CQ9P0S9 112 aa21.74■■□□□ 1.07
CBX4-201ENST00000269397 TRBV19A0A075B6N1 114 aa21.74■■□□□ 1.07
CBX4-201ENST00000269397 HOXB4P17483 251 aaPredicted RBP21.74■■□□□ 1.07
CBX4-201ENST00000269397 FAM57AQ8TBR7 257 aa21.74■■□□□ 1.07
CBX4-201ENST00000269397 C8orf49Q96NF6 230 aa21.74■■□□□ 1.07
CBX4-201ENST00000269397 DYNLRB1Q9NP97 96 aa21.74■■□□□ 1.07
CBX4-201ENST00000269397 PSG8Q9UQ74 426 aa21.74■■□□□ 1.07
CBX4-201ENST00000269397 RNASE6Q93091 150 aaKnown RBP21.73■■□□□ 1.07
CBX4-201ENST00000269397 LYNX1G3V0Z9 82 aa21.73■■□□□ 1.07
CBX4-201ENST00000269397 LYNX1P0DP58 116 aa21.73■■□□□ 1.07
CBX4-201ENST00000269397 BCL6BQ8N143 479 aaPredicted RBP21.73■■□□□ 1.07
CBX4-201ENST00000269397 UQCRFS1P47985 274 aa21.72■■□□□ 1.07
CBX4-201ENST00000269397 SAPCD1Q5SSQ6 148 aa21.72■■□□□ 1.07
CBX4-201ENST00000269397 DCHS2Q6V1P9 2916 aa21.72■■□□□ 1.07
CBX4-201ENST00000269397 COX8AP10176 69 aa21.72■■□□□ 1.07
CBX4-201ENST00000269397 IGFL3Q6UXB1 125 aa21.72■■□□□ 1.07
CBX4-201ENST00000269397 SIGLEC15Q6ZMC9 328 aa21.72■■□□□ 1.07
CBX4-201ENST00000269397 ASCL5Q7RTU5 278 aa21.71■■□□□ 1.07
CBX4-201ENST00000269397 BPIFA4PQ86YQ2 179 aa21.71■■□□□ 1.07
CBX4-201ENST00000269397 OR10AG1Q8NH19 301 aa21.71■■□□□ 1.07
CBX4-201ENST00000269397 TMEM213A2RRL7 107 aa21.71■■□□□ 1.07
CBX4-201ENST00000269397 RBPJQ06330 500 aa21.71■■□□□ 1.07
CBX4-201ENST00000269397 CD5LO43866 347 aa21.7■■□□□ 1.06
CBX4-201ENST00000269397 CNIH1O95406 144 aa21.7■■□□□ 1.06
CBX4-201ENST00000269397 CSN1S1P47710 185 aa21.7■■□□□ 1.06
CBX4-201ENST00000269397 SCNM1Q9BWG6 230 aa21.7■■□□□ 1.06
CBX4-201ENST00000269397 D6R8Y8 96 aa21.7■■□□□ 1.06
CBX4-201ENST00000269397 IGLV1-47P01700 117 aa21.7■■□□□ 1.06
CBX4-201ENST00000269397 ANKRD39Q53RE8 183 aa21.7■■□□□ 1.06
CBX4-201ENST00000269397 KLF17Q5JT82 389 aaPredicted RBP21.7■■□□□ 1.06
CBX4-201ENST00000269397 VPS25Q9BRG1 176 aa21.7■■□□□ 1.06
CBX4-201ENST00000269397 A0A096LNJ9 63 aa21.69■■□□□ 1.06
CBX4-201ENST00000269397 BUB1B-PAK6H3BSN5 160 aa21.69■■□□□ 1.06
CBX4-201ENST00000269397 PSG3Q16557 428 aa21.69■■□□□ 1.06
CBX4-201ENST00000269397 OCIAD2Q56VL3 154 aa21.69■■□□□ 1.06
CBX4-201ENST00000269397 TMEM75Q8N9X5 138 aa21.69■■□□□ 1.06
CBX4-201ENST00000269397 SHANK2-AS3Q9BTD1 123 aa21.69■■□□□ 1.06
CBX4-201ENST00000269397 IL4P05112 153 aa21.69■■□□□ 1.06
CBX4-201ENST00000269397 FCGR2BP31994 310 aaPredicted RBP21.69■■□□□ 1.06
CBX4-201ENST00000269397 PIP4P2Q8N4L2 257 aa21.68■■□□□ 1.06
CBX4-201ENST00000269397 C7orf71A4D174 169 aa21.68■■□□□ 1.06
CBX4-201ENST00000269397 AMN1Q8IY45 258 aa21.68■■□□□ 1.06
CBX4-201ENST00000269397 K7EIM0 57 aa21.67■■□□□ 1.06
CBX4-201ENST00000269397 RPEQ96AT9 228 aa21.67■■□□□ 1.06
CBX4-201ENST00000269397 KAAG1Q9UBP8 84 aa21.67■■□□□ 1.06
CBX4-201ENST00000269397 SPTBN2O15020 2390 aa21.67■■□□□ 1.06
CBX4-201ENST00000269397 LYZL1Q6UWQ5 148 aa21.67■■□□□ 1.06
CBX4-201ENST00000269397 SIGLEC8Q9NYZ4 499 aa21.67■■□□□ 1.06
CBX4-201ENST00000269397 K7EQM0 130 aa21.66■■□□□ 1.06
CBX4-201ENST00000269397 ARHGAP32A7KAX9 2087 aa21.66■■□□□ 1.06
CBX4-201ENST00000269397 H3BRN7 92 aa21.66■■□□□ 1.06
CBX4-201ENST00000269397 NAA38Q9BRA0 125 aaKnown RBP21.66■■□□□ 1.06
CBX4-201ENST00000269397 GAGE12BA1L429 117 aa21.65■■□□□ 1.06
CBX4-201ENST00000269397 NHLH1Q02575 133 aa21.65■■□□□ 1.06
CBX4-201ENST00000269397 ZNF491Q8N8L2 437 aa21.65■■□□□ 1.06
CBX4-201ENST00000269397 E7EQL1 145 aa21.64■■□□□ 1.06
CBX4-201ENST00000269397 TMEM97Q5BJF2 176 aa21.64■■□□□ 1.06
CBX4-201ENST00000269397 RNF125Q96EQ8 232 aa21.64■■□□□ 1.06
CBX4-201ENST00000269397 ZNF414Q96IQ9 312 aa21.64■■□□□ 1.06
CBX4-201ENST00000269397 RALYQ9UKM9 306 aaKnown RBP21.64■■□□□ 1.06
CBX4-201ENST00000269397 PAX2Q02962 417 aa21.64■■□□□ 1.05
CBX4-201ENST00000269397 COTL1Q14019 142 aa21.64■■□□□ 1.05
CBX4-201ENST00000269397 RIF1Q5UIP0 2472 aaKnown RBP21.63■■□□□ 1.05
CBX4-201ENST00000269397 SMKR1H3BMG3 65 aa21.63■■□□□ 1.05
CBX4-201ENST00000269397 CT45A10P0DMU9 189 aa21.63■■□□□ 1.05
CBX4-201ENST00000269397 PRELID3AQ96N28 172 aa21.63■■□□□ 1.05
CBX4-201ENST00000269397 PEF1Q9UBV8 284 aaKnown RBP21.63■■□□□ 1.05
CBX4-201ENST00000269397 RABAC1Q9UI14 185 aa21.63■■□□□ 1.05
CBX4-201ENST00000269397 TRBV6-1A0A0K0K1D8 114 aa21.63■■□□□ 1.05
CBX4-201ENST00000269397 CACNG7P62955 275 aa21.63■■□□□ 1.05
CBX4-201ENST00000269397 WFDC3Q8IUB2 231 aa21.63■■□□□ 1.05
CBX4-201ENST00000269397 FGF6P10767 208 aa21.62■■□□□ 1.05
CBX4-201ENST00000269397 HILPDAQ9Y5L2 63 aa21.62■■□□□ 1.05
CBX4-201ENST00000269397 PRRG2O14669 202 aa21.61■■□□□ 1.05
CBX4-201ENST00000269397 SVEP1Q4LDE5 3571 aa21.61■■□□□ 1.05
CBX4-201ENST00000269397 GATD1Q8NB37 220 aa21.61■■□□□ 1.05
CBX4-201ENST00000269397 ABCA4P78363 2273 aa21.61■■□□□ 1.05
CBX4-201ENST00000269397 SHISA9B4DS77 424 aa21.6■■□□□ 1.05
CBX4-201ENST00000269397 TIMM23O14925 209 aa21.6■■□□□ 1.05
CBX4-201ENST00000269397 MRPS12O15235 138 aaKnown RBP21.6■■□□□ 1.05
CBX4-201ENST00000269397 TNFRSF14Q92956 283 aa21.6■■□□□ 1.05
CBX4-201ENST00000269397 RELNP78509 3460 aa21.6■■□□□ 1.05
CBX4-201ENST00000269397 IGKV2-40A0A087WW87 121 aaPredicted RBP21.6■■□□□ 1.05
CBX4-201ENST00000269397 TMEM189A5PLL7 270 aa21.6■■□□□ 1.05
CBX4-201ENST00000269397 IGKV2D-40P01614 121 aaPredicted RBP21.6■■□□□ 1.05
CBX4-201ENST00000269397 PPBPP02775 128 aa21.6■■□□□ 1.05
CBX4-201ENST00000269397 THYN1Q9P016 225 aa21.59■■□□□ 1.05
CBX4-201ENST00000269397 SH2D1AO60880 128 aa21.59■■□□□ 1.05
CBX4-201ENST00000269397 FAM104BQ5XKR9 115 aa21.59■■□□□ 1.05
CBX4-201ENST00000269397 PPIAL4CA0A0B4J2A2 164 aa21.58■■□□□ 1.05
CBX4-201ENST00000269397 A0A1B0GW15 77 aa21.58■■□□□ 1.05
CBX4-201ENST00000269397 VSTM5A8MXK1 200 aa21.58■■□□□ 1.05
CBX4-201ENST00000269397 PPIAL4GP0DN37 164 aa21.58■■□□□ 1.05
CBX4-201ENST00000269397 APOBEC3AP31941 199 aaPredicted RBP21.58■■□□□ 1.05
CBX4-201ENST00000269397 MRPL51Q4U2R6 128 aaKnown RBP21.58■■□□□ 1.04
CBX4-201ENST00000269397 IGFL4Q6B9Z1 124 aa21.58■■□□□ 1.04
CBX4-201ENST00000269397 PRSS57Q6UWY2 283 aa21.58■■□□□ 1.04
CBX4-201ENST00000269397 ZNF493Q6ZR52 646 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms