RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 TRAV26-2A0A0B4J265 109 aa12.26□□□□□ -0.45
NID1-201ENST00000264187 TINCRA0A1B0GVN0 87 aa12.26□□□□□ -0.45
NID1-201ENST00000264187 NEGR1Q7Z3B1 354 aa12.26□□□□□ -0.45
NID1-201ENST00000264187 Q86TA4 180 aa12.25□□□□□ -0.45
NID1-201ENST00000264187 ATRXP46100 2492 aa12.25□□□□□ -0.45
NID1-201ENST00000264187 USP54Q70EL1 1684 aa12.25□□□□□ -0.45
NID1-201ENST00000264187 LOC102723996A0A087X1L8 192 aa12.25□□□□□ -0.45
NID1-201ENST00000264187 hADV29S1A0JD25 119 aa12.25□□□□□ -0.45
NID1-201ENST00000264187 COL8A2P25067 703 aa12.25□□□□□ -0.45
NID1-201ENST00000264187 SCRT2Q9NQ03 307 aa12.25□□□□□ -0.45
NID1-201ENST00000264187 LHBP01229 141 aa12.25□□□□□ -0.45
NID1-201ENST00000264187 NMSQ5H8A3 153 aa12.25□□□□□ -0.45
NID1-201ENST00000264187 TMEM14EPQ6UXP3 125 aa12.25□□□□□ -0.45
NID1-201ENST00000264187 DOCK9Q9BZ29 2069 aa12.25□□□□□ -0.45
NID1-201ENST00000264187 CRLF1O75462 422 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 GAGE6Q13070 117 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 KLF5Q13887 457 aaPredicted RBP12.24□□□□□ -0.45
NID1-201ENST00000264187 IGHG3P01860 377 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 DAD1P61803 113 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 MINOS1Q5TGZ0 78 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 CLPSL2Q6UWE3 100 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 TRPT1Q86TN4 253 aaKnown RBP12.24□□□□□ -0.45
NID1-201ENST00000264187 GAFA1Q96PS6 74 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 MINOS1-NBL1R4GNA1 71 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 TSSC4Q9Y5U2 329 aaPredicted RBP12.24□□□□□ -0.45
NID1-201ENST00000264187 IGLV3-12A0A075B6K2 115 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 GAGE7O76087 117 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 IGKV1-16P04430 117 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 GAGE12FP0CL80 117 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 GAGE12GP0CL81 117 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 GAGE12IP0CL82 117 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 GATA4P43694 442 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 PAX9P55771 341 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 GGNQ86UU5 652 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 LHFPL1Q86WI0 220 aa12.24□□□□□ -0.45
NID1-201ENST00000264187 RNF166Q96A37 237 aaPredicted RBP12.24□□□□□ -0.45
NID1-201ENST00000264187 DAZ1Q9NQZ3 744 aaKnown RBP12.24□□□□□ -0.45
NID1-201ENST00000264187 PTPRFP10586 1907 aa12.23□□□□□ -0.45
NID1-201ENST00000264187 MTCL1Q9Y4B5 1905 aaKnown RBP12.23□□□□□ -0.45
NID1-201ENST00000264187 FANCMQ8IYD8 2048 aa12.23□□□□□ -0.45
NID1-201ENST00000264187 UBL5Q9BZL1 73 aa12.23□□□□□ -0.45
NID1-201ENST00000264187 TRAV1-1A0A0B4J248 108 aa12.23□□□□□ -0.45
NID1-201ENST00000264187 SAA4P35542 130 aa12.23□□□□□ -0.45
NID1-201ENST00000264187 THAP8Q8NA92 274 aa12.23□□□□□ -0.45
NID1-201ENST00000264187 BPESC1Q9GZL8 116 aa12.23□□□□□ -0.45
NID1-201ENST00000264187 J3QRE1 110 aa12.23□□□□□ -0.45
NID1-201ENST00000264187 DSCR9P59020 149 aa12.23□□□□□ -0.45
NID1-201ENST00000264187 MRPL27Q9P0M9 148 aaKnown RBP12.23□□□□□ -0.45
NID1-201ENST00000264187 TRAV12-2A0A075B6T6 113 aa12.23□□□□□ -0.45
NID1-201ENST00000264187 A0A0G2JRQ6 117 aa12.23□□□□□ -0.45
NID1-201ENST00000264187 C15orf62A8K5M9 175 aa12.23□□□□□ -0.45
NID1-201ENST00000264187 C5orf47Q569G3 176 aa12.23□□□□□ -0.45
NID1-201ENST00000264187 C2orf66Q6UXQ4 117 aa12.22□□□□□ -0.45
NID1-201ENST00000264187 TAL2Q16559 108 aa12.22□□□□□ -0.45
NID1-201ENST00000264187 USMG5Q96IX5 58 aa12.22□□□□□ -0.45
NID1-201ENST00000264187 TRBV25-1A0A075B6N4 114 aa12.22□□□□□ -0.45
NID1-201ENST00000264187 FER1L5A0AVI2 2057 aa12.22□□□□□ -0.45
NID1-201ENST00000264187 MST1P26927 711 aa12.22□□□□□ -0.45
NID1-201ENST00000264187 ATP6V0BQ99437 205 aa12.22□□□□□ -0.45
NID1-201ENST00000264187 A0A0G2JNJ9 132 aa12.21□□□□□ -0.45
NID1-201ENST00000264187 IL18BPO95998 194 aa12.21□□□□□ -0.45
NID1-201ENST00000264187 RNASE13Q5GAN3 156 aaKnown RBP12.21□□□□□ -0.45
NID1-201ENST00000264187 SRSF8Q9BRL6 282 aaKnown RBP12.21□□□□□ -0.45
NID1-201ENST00000264187 Q9UFV3 132 aa12.21□□□□□ -0.45
NID1-201ENST00000264187 RGPD4Q7Z3J3 1758 aa12.21□□□□□ -0.45
NID1-201ENST00000264187 CFHR1Q03591 330 aa12.21□□□□□ -0.45
NID1-201ENST00000264187 Q71RC1 249 aaPredicted RBP12.21□□□□□ -0.45
NID1-201ENST00000264187 ZNRF2Q8NHG8 242 aa12.21□□□□□ -0.45
NID1-201ENST00000264187 KIF26BQ2KJY2 2108 aa12.21□□□□□ -0.45
NID1-201ENST00000264187 RNASE2P10153 161 aaKnown RBP12.21□□□□□ -0.45
NID1-201ENST00000264187 ETDBQ3ZM63 59 aa12.21□□□□□ -0.45
NID1-201ENST00000264187 FAM223BA6NKX1 122 aa12.21□□□□□ -0.46
NID1-201ENST00000264187 FGF6P10767 208 aa12.21□□□□□ -0.46
NID1-201ENST00000264187 AZU1P20160 251 aa12.21□□□□□ -0.46
NID1-201ENST00000264187 PI4KAP42356 2102 aa12.21□□□□□ -0.46
NID1-201ENST00000264187 FAM223AQ8IWN6 122 aa12.21□□□□□ -0.46
NID1-201ENST00000264187 KLHDC3Q9BQ90 382 aa12.21□□□□□ -0.46
NID1-201ENST00000264187 STRCQ7RTU9 1775 aa12.21□□□□□ -0.46
NID1-201ENST00000264187 IGKV1D-17A0A075B6S4 117 aa12.21□□□□□ -0.46
NID1-201ENST00000264187 ASPHD1Q5U4P2 390 aa12.21□□□□□ -0.46
NID1-201ENST00000264187 PLXNB2O15031 1838 aa12.21□□□□□ -0.46
NID1-201ENST00000264187 POLR3KQ9Y2Y1 108 aaPredicted RBP12.2□□□□□ -0.46
NID1-201ENST00000264187 IGLV3-32A0A0A0MS00 114 aa12.2□□□□□ -0.46
NID1-201ENST00000264187 RNF223E7ERA6 249 aa12.2□□□□□ -0.46
NID1-201ENST00000264187 INAFM2P0DMQ5 153 aa12.2□□□□□ -0.46
NID1-201ENST00000264187 DEFB105AQ8NG35 78 aa12.2□□□□□ -0.46
NID1-201ENST00000264187 TRPM3Q9HCF6 1732 aaPredicted RBP12.2□□□□□ -0.46
NID1-201ENST00000264187 MBD3L4A6NDZ8 208 aaPredicted RBP12.2□□□□□ -0.46
NID1-201ENST00000264187 MBD3L3A6NE82 208 aaPredicted RBP12.2□□□□□ -0.46
NID1-201ENST00000264187 MBD3L5A6NJ08 208 aaPredicted RBP12.2□□□□□ -0.46
NID1-201ENST00000264187 MBD3L2Q8NHZ7 208 aaPredicted RBP12.2□□□□□ -0.46
NID1-201ENST00000264187 A0A1B0GW64 132 aa12.19□□□□□ -0.46
NID1-201ENST00000264187 PRSS29PA6NIE9 313 aa12.19□□□□□ -0.46
NID1-201ENST00000264187 Q6ZRM9 215 aa12.19□□□□□ -0.46
NID1-201ENST00000264187 DSCR8Q96T75 97 aa12.19□□□□□ -0.46
NID1-201ENST00000264187 LYPD1Q8N2G4 141 aa12.19□□□□□ -0.46
NID1-201ENST00000264187 FLVCR1-AS1Q8TAF5 88 aa12.19□□□□□ -0.46
NID1-201ENST00000264187 RNF5Q99942 180 aa12.19□□□□□ -0.46
NID1-201ENST00000264187 REG4Q9BYZ8 158 aa12.19□□□□□ -0.46
NID1-201ENST00000264187 SHANK2-AS3Q9BTD1 123 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms