RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PSG8Q9UQ74 426 aa13.12□□□□□ -0.31
GPC1-201ENST00000264039 DLX1P56177 255 aa13.12□□□□□ -0.31
GPC1-201ENST00000264039 TRANK1O15050 2925 aa13.11□□□□□ -0.31
GPC1-201ENST00000264039 PATE2Q6UY27 113 aa13.11□□□□□ -0.31
GPC1-201ENST00000264039 MAFAQ8NHW3 353 aaPredicted RBP13.11□□□□□ -0.31
GPC1-201ENST00000264039 Q8TAT8 98 aa13.11□□□□□ -0.31
GPC1-201ENST00000264039 FAM90A9PA6NNJ1 464 aa13.11□□□□□ -0.31
GPC1-201ENST00000264039 C1orf229Q6ZS94 237 aaPredicted RBP13.11□□□□□ -0.31
GPC1-201ENST00000264039 SLC25A48Q6ZT89 311 aaKnown RBP13.11□□□□□ -0.31
GPC1-201ENST00000264039 OR4C13Q8NGP0 309 aa13.11□□□□□ -0.31
GPC1-201ENST00000264039 NDFIP1Q9BT67 221 aa13.11□□□□□ -0.31
GPC1-201ENST00000264039 AGRNO00468 2067 aa13.1□□□□□ -0.31
GPC1-201ENST00000264039 TRAV40A0A0B4J280 105 aa13.1□□□□□ -0.31
GPC1-201ENST00000264039 IGHV3-23P01764 117 aa13.1□□□□□ -0.31
GPC1-201ENST00000264039 BEX4Q9NWD9 120 aaPredicted RBP13.1□□□□□ -0.31
GPC1-201ENST00000264039 SCNM1Q9BWG6 230 aa13.1□□□□□ -0.31
GPC1-201ENST00000264039 DYNLRB1Q9NP97 96 aa13.1□□□□□ -0.31
GPC1-201ENST00000264039 MRPL36Q9P0J6 103 aaKnown RBP13.1□□□□□ -0.31
GPC1-201ENST00000264039 E7EUB6 86 aa13.1□□□□□ -0.31
GPC1-201ENST00000264039 NPIPB6E9PJ23 425 aa13.1□□□□□ -0.31
GPC1-201ENST00000264039 WT1-ASQ06250 92 aa13.1□□□□□ -0.31
GPC1-201ENST00000264039 VKORC1Q9BQB6 163 aa13.1□□□□□ -0.31
GPC1-201ENST00000264039 MUC22E2RYF6 1773 aaPredicted RBP13.09□□□□□ -0.31
GPC1-201ENST00000264039 ZNF785A8K8V0 405 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 OR11H12B2RN74 326 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 C1orf122Q6ZSJ8 110 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 OR11H1Q8NG94 326 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 OR11H2Q8NH07 326 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 C17orf77Q96MU5 243 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 PRSS46E5RG02 174 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 IGKCP01834 107 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 C11orf53Q8IXP5 236 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 WDFY4Q6ZS81 3184 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 PRTN3P24158 256 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 C3orf36Q3SXR2 165 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 Q86TA4 180 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 C20orf78Q9BR46 151 aa13.09□□□□□ -0.31
GPC1-201ENST00000264039 LAMTOR5O43504 91 aa13.08□□□□□ -0.32
GPC1-201ENST00000264039 MC5RP33032 325 aa13.08□□□□□ -0.32
GPC1-201ENST00000264039 FER1L6-AS2Q96M78 137 aa13.08□□□□□ -0.32
GPC1-201ENST00000264039 DIAPH2-AS1Q14236 149 aa13.08□□□□□ -0.32
GPC1-201ENST00000264039 C8orf49Q96NF6 230 aa13.08□□□□□ -0.32
GPC1-201ENST00000264039 TPSG1Q9NRR2 321 aa13.08□□□□□ -0.32
GPC1-201ENST00000264039 IGKV2-40A0A087WW87 121 aaPredicted RBP13.07□□□□□ -0.32
GPC1-201ENST00000264039 IGKV2D-40P01614 121 aaPredicted RBP13.07□□□□□ -0.32
GPC1-201ENST00000264039 INSL3P51460 131 aa13.07□□□□□ -0.32
GPC1-201ENST00000264039 TMEM105Q8N8V8 129 aa13.07□□□□□ -0.32
GPC1-201ENST00000264039 PGPEP1Q9NXJ5 209 aa13.07□□□□□ -0.32
GPC1-201ENST00000264039 INSIG2Q9Y5U4 225 aa13.07□□□□□ -0.32
GPC1-201ENST00000264039 NDUFB3O43676 98 aa13.07□□□□□ -0.32
GPC1-201ENST00000264039 NPYP01303 97 aa13.07□□□□□ -0.32
GPC1-201ENST00000264039 SPRNQ5BIV9 151 aa13.07□□□□□ -0.32
GPC1-201ENST00000264039 FBXL15Q9H469 300 aa13.07□□□□□ -0.32
GPC1-201ENST00000264039 FAM90A1Q86YD7 464 aa13.06□□□□□ -0.32
GPC1-201ENST00000264039 OSR1Q8TAX0 266 aaPredicted RBP13.06□□□□□ -0.32
GPC1-201ENST00000264039 SPAG8Q99932 426 aaPredicted RBP13.06□□□□□ -0.32
GPC1-201ENST00000264039 IGHV3-49A0A0A0MS15 119 aa13.06□□□□□ -0.32
GPC1-201ENST00000264039 SRRM5B3KS81 715 aa13.06□□□□□ -0.32
GPC1-201ENST00000264039 B5MCH6 92 aa13.06□□□□□ -0.32
GPC1-201ENST00000264039 Q71RC1 249 aaPredicted RBP13.06□□□□□ -0.32
GPC1-201ENST00000264039 DPM2O94777 84 aa13.06□□□□□ -0.32
GPC1-201ENST00000264039 KLF17Q5JT82 389 aaPredicted RBP13.06□□□□□ -0.32
GPC1-201ENST00000264039 TMEM75Q8N9X5 138 aa13.06□□□□□ -0.32
GPC1-201ENST00000264039 TET2Q6N021 2002 aaPredicted RBP13.06□□□□□ -0.32
GPC1-201ENST00000264039 TTC28Q96AY4 2481 aa13.06□□□□□ -0.32
GPC1-201ENST00000264039 IGHV3-66A0A0C4DH42 116 aa13.05□□□□□ -0.32
GPC1-201ENST00000264039 TMEM8BA6NDV4 472 aa13.05□□□□□ -0.32
GPC1-201ENST00000264039 SMIM17P0DL12 118 aa13.05□□□□□ -0.32
GPC1-201ENST00000264039 S100A4P26447 101 aaKnown RBP13.05□□□□□ -0.32
GPC1-201ENST00000264039 TMEM133Q9H2Q1 129 aa13.05□□□□□ -0.32
GPC1-201ENST00000264039 WDFY3Q8IZQ1 3526 aa13.05□□□□□ -0.32
GPC1-201ENST00000264039 A0A1B0GXF2 115 aa13.05□□□□□ -0.32
GPC1-201ENST00000264039 TTC32Q5I0X7 151 aa13.05□□□□□ -0.32
GPC1-201ENST00000264039 SPANXN1Q5VSR9 72 aa13.05□□□□□ -0.32
GPC1-201ENST00000264039 TMEM158Q8WZ71 300 aa13.05□□□□□ -0.32
GPC1-201ENST00000264039 NDUFS7O75251 213 aa13.05□□□□□ -0.32
GPC1-201ENST00000264039 CLEC3BP05452 202 aa13.05□□□□□ -0.32
GPC1-201ENST00000264039 SPRR3Q9UBC9 169 aa13.05□□□□□ -0.32
GPC1-201ENST00000264039 SPTBN5Q9NRC6 3674 aaKnown RBP13.05□□□□□ -0.32
GPC1-201ENST00000264039 PTPRSQ13332 1948 aa13.05□□□□□ -0.32
GPC1-201ENST00000264039 IGKV3-7A0A075B6H7 116 aa13.04□□□□□ -0.32
GPC1-201ENST00000264039 Q6ZT83 130 aa13.04□□□□□ -0.32
GPC1-201ENST00000264039 BOD1L2Q8IYS8 172 aa13.04□□□□□ -0.32
GPC1-201ENST00000264039 PTH2Q96A98 100 aa13.04□□□□□ -0.32
GPC1-201ENST00000264039 MRAP2Q96G30 205 aa13.04□□□□□ -0.32
GPC1-201ENST00000264039 OTORQ9NRC9 128 aa13.04□□□□□ -0.32
GPC1-201ENST00000264039 GATA1P15976 413 aaPredicted RBP13.04□□□□□ -0.32
GPC1-201ENST00000264039 EMP1P54849 157 aa13.04□□□□□ -0.32
GPC1-201ENST00000264039 PRR7Q8TB68 274 aa13.04□□□□□ -0.32
GPC1-201ENST00000264039 TRBV25-1A0A075B6N4 114 aa13.04□□□□□ -0.32
GPC1-201ENST00000264039 RPL11P62913 178 aaKnown RBP13.04□□□□□ -0.32
GPC1-201ENST00000264039 MRPL51Q4U2R6 128 aaKnown RBP13.04□□□□□ -0.32
GPC1-201ENST00000264039 CCDC144NLQ6NUI1 221 aa13.04□□□□□ -0.32
GPC1-201ENST00000264039 GLMPQ8WWB7 406 aa13.04□□□□□ -0.32
GPC1-201ENST00000264039 TRAV8-2A0A0B4J237 113 aa13.03□□□□□ -0.32
GPC1-201ENST00000264039 A0A1W2PPI3 338 aa13.03□□□□□ -0.32
GPC1-201ENST00000264039 HOXA3O43365 443 aaPredicted RBP13.03□□□□□ -0.32
GPC1-201ENST00000264039 SLC25A39Q9BZJ4 359 aaPredicted RBP13.03□□□□□ -0.32
GPC1-201ENST00000264039 TEX29Q8N6K0 151 aa13.03□□□□□ -0.32
GPC1-201ENST00000264039 CRXO43186 299 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms