RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 FMC1Q96HJ9 113 aa12.96□□□□□ -0.33
PDZRN3-201ENST00000263666 FAM167A-AS1Q96KT0 104 aa12.96□□□□□ -0.33
PDZRN3-201ENST00000263666 ALKBH7Q9BT30 221 aaPredicted RBP12.96□□□□□ -0.33
PDZRN3-201ENST00000263666 PRELID3AQ96N28 172 aa12.96□□□□□ -0.33
PDZRN3-201ENST00000263666 COL4A2P08572 1712 aa12.96□□□□□ -0.33
PDZRN3-201ENST00000263666 IGFL2Q6UWQ7 119 aa12.96□□□□□ -0.34
PDZRN3-201ENST00000263666 C8orf46Q8TAG6 207 aa12.96□□□□□ -0.34
PDZRN3-201ENST00000263666 C7orf71A4D174 169 aa12.96□□□□□ -0.34
PDZRN3-201ENST00000263666 GCSHP23434 173 aa12.96□□□□□ -0.34
PDZRN3-201ENST00000263666 SP5Q6BEB4 398 aaPredicted RBP12.96□□□□□ -0.34
PDZRN3-201ENST00000263666 ZFP30Q9Y2G7 519 aa12.96□□□□□ -0.34
PDZRN3-201ENST00000263666 SMIM27A0A1W2PRY6 76 aa12.95□□□□□ -0.34
PDZRN3-201ENST00000263666 MFAP4P55083 255 aa12.95□□□□□ -0.34
PDZRN3-201ENST00000263666 ATP5J2P56134 94 aa12.95□□□□□ -0.34
PDZRN3-201ENST00000263666 ZNF833PQ6ZTB9 187 aa12.95□□□□□ -0.34
PDZRN3-201ENST00000263666 CACNG7P62955 275 aa12.95□□□□□ -0.34
PDZRN3-201ENST00000263666 ATMQ13315 3056 aa12.95□□□□□ -0.34
PDZRN3-201ENST00000263666 TMEM213A2RRL7 107 aa12.95□□□□□ -0.34
PDZRN3-201ENST00000263666 DPM3Q9P2X0 92 aa12.95□□□□□ -0.34
PDZRN3-201ENST00000263666 CLEC2AQ6UVW9 174 aa12.94□□□□□ -0.34
PDZRN3-201ENST00000263666 AMN1Q8IY45 258 aa12.94□□□□□ -0.34
PDZRN3-201ENST00000263666 PPP1R14DQ9NXH3 145 aa12.94□□□□□ -0.34
PDZRN3-201ENST00000263666 DCHS1Q96JQ0 3298 aa12.94□□□□□ -0.34
PDZRN3-201ENST00000263666 D6R8Y8 96 aa12.94□□□□□ -0.34
PDZRN3-201ENST00000263666 GRNP28799 593 aaKnown RBP12.94□□□□□ -0.34
PDZRN3-201ENST00000263666 LDLRAD2Q5SZI1 272 aa12.94□□□□□ -0.34
PDZRN3-201ENST00000263666 AMMECR1LQ6DCA0 310 aa12.94□□□□□ -0.34
PDZRN3-201ENST00000263666 SYS1-DBNDD2H3BUS1 97 aa12.94□□□□□ -0.34
PDZRN3-201ENST00000263666 LINC00310P59036 64 aa12.94□□□□□ -0.34
PDZRN3-201ENST00000263666 FBLN7Q53RD9 439 aa12.94□□□□□ -0.34
PDZRN3-201ENST00000263666 CEACAM4O75871 244 aa12.93□□□□□ -0.34
PDZRN3-201ENST00000263666 C8orf49Q96NF6 230 aa12.93□□□□□ -0.34
PDZRN3-201ENST00000263666 OTORQ9NRC9 128 aa12.93□□□□□ -0.34
PDZRN3-201ENST00000263666 GATA4P43694 442 aa12.93□□□□□ -0.34
PDZRN3-201ENST00000263666 GDF5OSQ5U4N7 250 aa12.93□□□□□ -0.34
PDZRN3-201ENST00000263666 LINC00322Q6ZN03 302 aaPredicted RBP12.93□□□□□ -0.34
PDZRN3-201ENST00000263666 C21orf62Q9NYP8 219 aa12.93□□□□□ -0.34
PDZRN3-201ENST00000263666 LOC105371242A0A075B767 164 aa12.93□□□□□ -0.34
PDZRN3-201ENST00000263666 GAGE10A6NGK3 116 aa12.93□□□□□ -0.34
PDZRN3-201ENST00000263666 USP9XQ93008 2570 aaPredicted RBP12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 LYZL1Q6UWQ5 148 aa12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 TMEM75Q8N9X5 138 aa12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 IGLV2-8P01709 118 aa12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 IFI27P40305 119 aaPredicted RBP12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 TMEM30BQ3MIR4 351 aa12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 ZNF672Q499Z4 452 aaPredicted RBP12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 C12orf54Q6X4T0 127 aa12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 SONP18583 2426 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 CEACAM8P31997 349 aaPredicted RBP12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 TMEM249Q2WGJ8 235 aa12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 KHDC1LQ5JSQ8 128 aa12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 SPANXN1Q5VSR9 72 aa12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 CHODLQ9H9P2 273 aa12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 NACAE9PAV3 2078 aa12.92□□□□□ -0.34
PDZRN3-201ENST00000263666 RUSC1-AS1Q66K80 236 aa12.91□□□□□ -0.34
PDZRN3-201ENST00000263666 Q86TA4 180 aa12.91□□□□□ -0.34
PDZRN3-201ENST00000263666 IGHV1-24A0A0C4DH33 117 aa12.91□□□□□ -0.34
PDZRN3-201ENST00000263666 IGLC7A0M8Q6 106 aa12.91□□□□□ -0.34
PDZRN3-201ENST00000263666 BUB1B-PAK6H3BSN5 160 aa12.91□□□□□ -0.34
PDZRN3-201ENST00000263666 NBR2O15453 112 aa12.91□□□□□ -0.34
PDZRN3-201ENST00000263666 POU2AF1Q16633 256 aa12.91□□□□□ -0.34
PDZRN3-201ENST00000263666 KALRNO60229 2985 aa12.91□□□□□ -0.34
PDZRN3-201ENST00000263666 MGPP08493 103 aa12.91□□□□□ -0.34
PDZRN3-201ENST00000263666 CGB3P0DN86 165 aa12.91□□□□□ -0.34
PDZRN3-201ENST00000263666 CGB7P0DN87 165 aa12.91□□□□□ -0.34
PDZRN3-201ENST00000263666 IGF2BP2-AS1Q96M15 143 aa12.91□□□□□ -0.34
PDZRN3-201ENST00000263666 ITGB1BP1O14713 200 aa12.9□□□□□ -0.34
PDZRN3-201ENST00000263666 TMEM155Q4W5P6 130 aa12.9□□□□□ -0.34
PDZRN3-201ENST00000263666 TRAV8-6A0A0B4J262 113 aa12.9□□□□□ -0.34
PDZRN3-201ENST00000263666 HLA-DMBP28068 263 aa12.9□□□□□ -0.34
PDZRN3-201ENST00000263666 ZNF414Q96IQ9 312 aa12.9□□□□□ -0.34
PDZRN3-201ENST00000263666 TRGV9Q99603 122 aa12.9□□□□□ -0.34
PDZRN3-201ENST00000263666 LY6EQ16553 131 aa12.9□□□□□ -0.34
PDZRN3-201ENST00000263666 PCSK5Q92824 1860 aa12.9□□□□□ -0.34
PDZRN3-201ENST00000263666 H3BUT2 72 aa12.89□□□□□ -0.35
PDZRN3-201ENST00000263666 HTN1P15515 57 aa12.89□□□□□ -0.35
PDZRN3-201ENST00000263666 CLEC19AQ6UXS0 136 aa12.89□□□□□ -0.35
PDZRN3-201ENST00000263666 GTSF1Q8WW33 167 aa12.89□□□□□ -0.35
PDZRN3-201ENST00000263666 ARPC1AQ92747 370 aa12.89□□□□□ -0.35
PDZRN3-201ENST00000263666 TMEM160Q9NX00 188 aa12.89□□□□□ -0.35
PDZRN3-201ENST00000263666 MRPL27Q9P0M9 148 aaKnown RBP12.89□□□□□ -0.35
PDZRN3-201ENST00000263666 RABAC1Q9UI14 185 aa12.89□□□□□ -0.35
PDZRN3-201ENST00000263666 PRSS57Q6UWY2 283 aa12.89□□□□□ -0.35
PDZRN3-201ENST00000263666 WFDC12Q8WWY7 111 aa12.89□□□□□ -0.35
PDZRN3-201ENST00000263666 TOMM40O96008 361 aa12.89□□□□□ -0.35
PDZRN3-201ENST00000263666 SFTA2Q6UW10 78 aa12.89□□□□□ -0.35
PDZRN3-201ENST00000263666 TACC2O95359 2948 aa12.88□□□□□ -0.35
PDZRN3-201ENST00000263666 F5H697 171 aa12.88□□□□□ -0.35
PDZRN3-201ENST00000263666 RPL7P18124 248 aaKnown RBP12.88□□□□□ -0.35
PDZRN3-201ENST00000263666 Q71RC1 249 aaPredicted RBP12.88□□□□□ -0.35
PDZRN3-201ENST00000263666 GLMPQ8WWB7 406 aa12.88□□□□□ -0.35
PDZRN3-201ENST00000263666 A0A1B0GWJ7 208 aa12.88□□□□□ -0.35
PDZRN3-201ENST00000263666 FNDC10F2Z333 226 aa12.88□□□□□ -0.35
PDZRN3-201ENST00000263666 SPRY2O43597 315 aa12.88□□□□□ -0.35
PDZRN3-201ENST00000263666 GUSBP1Q15486 140 aa12.88□□□□□ -0.35
PDZRN3-201ENST00000263666 CCL19Q99731 98 aa12.88□□□□□ -0.35
PDZRN3-201ENST00000263666 ORMDL3Q8N138 153 aa12.87□□□□□ -0.35
PDZRN3-201ENST00000263666 FER1L6-AS1Q8NA97 138 aa12.87□□□□□ -0.35
PDZRN3-201ENST00000263666 M0R381 172 aa12.87□□□□□ -0.35
PDZRN3-201ENST00000263666 THBDP07204 575 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms