RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 KLF12Q9Y4X4 402 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 TMEM213A2RRL7 107 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 VSTM5A8MXK1 200 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 OR2J3O76001 311 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 NCR2O95944 276 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 IGLV2-11P01706 119 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 KLF5Q13887 457 aaPredicted RBP7.22□□□□□ -1.25
MSH4-201ENST00000263187 CHRDL1Q9BU40 450 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 PRSS22Q9GZN4 317 aa7.22□□□□□ -1.25
MSH4-201ENST00000263187 IGKV2-40A0A087WW87 121 aaPredicted RBP7.21□□□□□ -1.25
MSH4-201ENST00000263187 IGHV3-66A0A0C4DH42 116 aa7.21□□□□□ -1.25
MSH4-201ENST00000263187 TNFRSF13BO14836 293 aaPredicted RBP7.21□□□□□ -1.25
MSH4-201ENST00000263187 IGKV2D-40P01614 121 aaPredicted RBP7.21□□□□□ -1.25
MSH4-201ENST00000263187 HLA-DMBP28068 263 aa7.21□□□□□ -1.25
MSH4-201ENST00000263187 PRSS3P2Q8NHM4 247 aa7.21□□□□□ -1.25
MSH4-201ENST00000263187 NAA38Q9BRA0 125 aaKnown RBP7.21□□□□□ -1.25
MSH4-201ENST00000263187 IGLV1-47P01700 117 aa7.21□□□□□ -1.26
MSH4-201ENST00000263187 UQCRFS1P47985 274 aa7.21□□□□□ -1.26
MSH4-201ENST00000263187 CRIP1P50238 77 aa7.21□□□□□ -1.26
MSH4-201ENST00000263187 TMEM30BQ3MIR4 351 aa7.21□□□□□ -1.26
MSH4-201ENST00000263187 TMEM75Q8N9X5 138 aa7.21□□□□□ -1.26
MSH4-201ENST00000263187 NGBQ9NPG2 151 aa7.21□□□□□ -1.26
MSH4-201ENST00000263187 I3L2K1 104 aa7.21□□□□□ -1.26
MSH4-201ENST00000263187 TMEM11P17152 192 aa7.21□□□□□ -1.26
MSH4-201ENST00000263187 IFI27P40305 119 aaPredicted RBP7.21□□□□□ -1.26
MSH4-201ENST00000263187 GAGE1Q13065 139 aa7.21□□□□□ -1.26
MSH4-201ENST00000263187 C3orf36Q3SXR2 165 aa7.21□□□□□ -1.26
MSH4-201ENST00000263187 MUC15Q8N387 334 aa7.21□□□□□ -1.26
MSH4-201ENST00000263187 LINC00311Q8N616 119 aa7.21□□□□□ -1.26
MSH4-201ENST00000263187 PPIFP30405 207 aaKnown RBP7.2□□□□□ -1.26
MSH4-201ENST00000263187 RASL11AQ6T310 242 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 ATP5L2Q7Z4Y8 100 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 OTORQ9NRC9 128 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 PSG8Q9UQ74 426 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 IGHV3-49A0A0A0MS15 119 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 A0A1B0GUT8 65 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 OR2T8A6NH00 312 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 HSBP1L1C9JCN9 74 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 INS-IGF2F8WCM5 200 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 K7EIM0 57 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 GNG7O60262 68 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 HLA-DRB1P01911 266 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 CD3EP07766 207 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 FOXC1Q12948 553 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 CDSNQ15517 529 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 AMN1Q8IY45 258 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 ZNF738Q8NE65 137 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 MAP1LC3CQ9BXW4 147 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 COX11Q9Y6N1 276 aa7.2□□□□□ -1.26
MSH4-201ENST00000263187 CRYGBP07316 175 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 APOBEC3AP31941 199 aaPredicted RBP7.19□□□□□ -1.26
MSH4-201ENST00000263187 PCP4P48539 62 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 BPIFA4PQ86YQ2 179 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 OR4C5Q8NGB2 326 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 RNF125Q96EQ8 232 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 CACNA1AO00555 2505 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 TRBV19A0A075B6N1 114 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 D6R8Y8 96 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 MSRB2Q9Y3D2 182 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 NPIPB5A8MRT5 1133 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 OR5AL1P0C617 328 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 LYZL1Q6UWQ5 148 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 FA2HQ7L5A8 372 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 ZNF491Q8N8L2 437 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 AP5S1Q9NUS5 200 aa7.19□□□□□ -1.26
MSH4-201ENST00000263187 ZNF672Q499Z4 452 aaPredicted RBP7.18□□□□□ -1.26
MSH4-201ENST00000263187 SLC25A34Q6PIV7 304 aa7.18□□□□□ -1.26
MSH4-201ENST00000263187 SIGLEC15Q6ZMC9 328 aa7.18□□□□□ -1.26
MSH4-201ENST00000263187 NEU4Q8WWR8 484 aaPredicted RBP7.18□□□□□ -1.26
MSH4-201ENST00000263187 C18orf15Q96N68 181 aa7.18□□□□□ -1.26
MSH4-201ENST00000263187 SCNM1Q9BWG6 230 aa7.18□□□□□ -1.26
MSH4-201ENST00000263187 MRPS16Q9Y3D3 137 aaKnown RBP7.18□□□□□ -1.26
MSH4-201ENST00000263187 CENPEQ02224 2701 aa7.18□□□□□ -1.26
MSH4-201ENST00000263187 CRYBG3Q68DQ2 2970 aa7.18□□□□□ -1.26
MSH4-201ENST00000263187 PRSS57Q6UWY2 283 aa7.18□□□□□ -1.26
MSH4-201ENST00000263187 TMEM191AQ9H0A3 160 aa7.18□□□□□ -1.26
MSH4-201ENST00000263187 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.18□□□□□ -1.26
MSH4-201ENST00000263187 NDPQ00604 133 aa7.18□□□□□ -1.26
MSH4-201ENST00000263187 FAM71F2Q6NXP2 309 aa7.18□□□□□ -1.26
MSH4-201ENST00000263187 SHANK2-AS3Q9BTD1 123 aa7.18□□□□□ -1.26
MSH4-201ENST00000263187 MSRB1Q9NZV6 116 aa7.18□□□□□ -1.26
MSH4-201ENST00000263187 KAAG1Q9UBP8 84 aa7.18□□□□□ -1.26
MSH4-201ENST00000263187 ZNF207O43670 478 aaKnown RBP7.17□□□□□ -1.26
MSH4-201ENST00000263187 GAS8-AS1O95177 125 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 LIPFP07098 398 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 CT45A10P0DMU9 189 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 UBE2V1Q13404 147 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 TM4SF20Q53R12 229 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 AMMECR1LQ6DCA0 310 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 MRPL52Q86TS9 123 aaKnown RBP7.17□□□□□ -1.26
MSH4-201ENST00000263187 ZNF492Q9P255 531 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 CELSR2Q9HCU4 2923 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 LOC105371242A0A075B767 164 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 NDUFS7O75251 213 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 RBPJQ06330 500 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 PSG3Q16557 428 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 DYNAPQ8N1N2 210 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 ZNF414Q96IQ9 312 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 VGLL1Q99990 258 aa7.17□□□□□ -1.26
MSH4-201ENST00000263187 B9A039 149 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms