RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 DPH3P1Q9H4G8 78 aa9.78□□□□□ -0.84
SMG6-201ENST00000263073 DKK1O94907 266 aa9.78□□□□□ -0.84
SMG6-201ENST00000263073 LY6DQ14210 128 aa9.78□□□□□ -0.84
SMG6-201ENST00000263073 RSPO3Q9BXY4 272 aaPredicted RBP9.78□□□□□ -0.84
SMG6-201ENST00000263073 IGLL1P15814 213 aa9.78□□□□□ -0.84
SMG6-201ENST00000263073 VWC2Q2TAL6 325 aa9.78□□□□□ -0.84
SMG6-201ENST00000263073 MORN3Q6PF18 240 aaPredicted RBP9.78□□□□□ -0.84
SMG6-201ENST00000263073 CITED1Q99966 193 aa9.78□□□□□ -0.84
SMG6-201ENST00000263073 IGHV1-24A0A0C4DH33 117 aa9.78□□□□□ -0.84
SMG6-201ENST00000263073 PAX9P55771 341 aa9.78□□□□□ -0.84
SMG6-201ENST00000263073 IGHV3-16A0A0C4DH30 117 aa9.77□□□□□ -0.84
SMG6-201ENST00000263073 DUX4L9Q6RFH8 374 aaPredicted RBP9.77□□□□□ -0.84
SMG6-201ENST00000263073 TMEM178BH3BS89 294 aa9.77□□□□□ -0.85
SMG6-201ENST00000263073 RS1O15537 224 aa9.77□□□□□ -0.85
SMG6-201ENST00000263073 ETDBQ3ZM63 59 aa9.77□□□□□ -0.85
SMG6-201ENST00000263073 IL17RELQ6ZVW7 336 aa9.77□□□□□ -0.85
SMG6-201ENST00000263073 TMEM86BQ8N661 226 aa9.77□□□□□ -0.85
SMG6-201ENST00000263073 DOCK9Q9BZ29 2069 aa9.77□□□□□ -0.85
SMG6-201ENST00000263073 DUSP14O95147 198 aaKnown RBP9.77□□□□□ -0.85
SMG6-201ENST00000263073 IGLV3-19P01714 112 aa9.77□□□□□ -0.85
SMG6-201ENST00000263073 LGALS1P09382 135 aaKnown RBP9.77□□□□□ -0.85
SMG6-201ENST00000263073 IGLC2P0DOY2 106 aa9.77□□□□□ -0.85
SMG6-201ENST00000263073 IGLC3P0DOY3 106 aa9.77□□□□□ -0.85
SMG6-201ENST00000263073 SLC25A16P16260 332 aa9.77□□□□□ -0.85
SMG6-201ENST00000263073 GAGE1Q13065 139 aa9.77□□□□□ -0.85
SMG6-201ENST00000263073 MORN5Q5VZ52 161 aa9.77□□□□□ -0.85
SMG6-201ENST00000263073 TNFRSF14Q92956 283 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 TIMM21Q9BVV7 248 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 PRB1P04280 392 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 CFHR3Q02985 330 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 SIGLEC9Q9Y336 463 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 BUB1B-PAK6H3BSN5 160 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 Q0VG73 95 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 FANCMQ8IYD8 2048 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 ZNF524Q96C55 264 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 INS-IGF2F8WCM5 200 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 INSP01308 110 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 UNQ6494/PRO21346Q6UXR6 183 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 C20orf144Q9BQM9 153 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 TP53TG1Q9Y2A0 90 aa9.76□□□□□ -0.85
SMG6-201ENST00000263073 IGHV2-5P01817 119 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 AMTNQ6UX39 209 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 POLEQ07864 2286 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 VCYO14598 125 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 COL8A2P25067 703 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 KLK9Q9UKQ9 250 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 KLF2Q9Y5W3 355 aaPredicted RBP9.75□□□□□ -0.85
SMG6-201ENST00000263073 LY96Q9Y6Y9 160 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 A0A1W2PPI3 338 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 SAP30O75446 220 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 C9orf153Q5TBE3 101 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 PRSS22Q9GZN4 317 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 C9orf118A6NHY6 69 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 LINC01549A6NIU2 74 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 ZFP36L1Q07352 338 aaKnown RBP9.75□□□□□ -0.85
SMG6-201ENST00000263073 KLF12Q9Y4X4 402 aa9.75□□□□□ -0.85
SMG6-201ENST00000263073 YLPM1P49750 1951 aaKnown RBP9.74□□□□□ -0.85
SMG6-201ENST00000263073 H3BMG7 143 aa9.74□□□□□ -0.85
SMG6-201ENST00000263073 PRIMA1Q86XR5 153 aa9.74□□□□□ -0.85
SMG6-201ENST00000263073 K7EMI3 77 aa9.74□□□□□ -0.85
SMG6-201ENST00000263073 COL4A6Q14031 1691 aa9.74□□□□□ -0.85
SMG6-201ENST00000263073 H3BUX3 64 aa9.74□□□□□ -0.85
SMG6-201ENST00000263073 K7EP13 123 aa9.74□□□□□ -0.85
SMG6-201ENST00000263073 V9GYV3 84 aa9.74□□□□□ -0.85
SMG6-201ENST00000263073 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
SMG6-201ENST00000263073 IGKV1-39P01597 117 aa9.73□□□□□ -0.85
SMG6-201ENST00000263073 IGKV1D-39P04432 117 aa9.73□□□□□ -0.85
SMG6-201ENST00000263073 RNASE13Q5GAN3 156 aaKnown RBP9.73□□□□□ -0.85
SMG6-201ENST00000263073 SCN5AQ14524 2016 aa9.73□□□□□ -0.85
SMG6-201ENST00000263073 MSRB2Q9Y3D2 182 aa9.73□□□□□ -0.85
SMG6-201ENST00000263073 C5orf64Q2M2E5 130 aa9.73□□□□□ -0.85
SMG6-201ENST00000263073 C6orf226Q5I0X4 101 aa9.73□□□□□ -0.85
SMG6-201ENST00000263073 LEPROTO15243 131 aa9.73□□□□□ -0.85
SMG6-201ENST00000263073 B3GALT5-AS1P59052 145 aa9.73□□□□□ -0.85
SMG6-201ENST00000263073 H3BMM0 161 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 ANXA2RQ3ZCQ2 193 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 MRPL51Q4U2R6 128 aaKnown RBP9.72□□□□□ -0.85
SMG6-201ENST00000263073 UBE2WQ96B02 151 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 ZC2HC1AQ96GY0 325 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 BVES-AS1Q5T3Y7 98 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 RUSC1-AS1Q66K80 236 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 PLSCR4Q9NRQ2 329 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 SBF1O95248 1867 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 SPRY2O43597 315 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 A0A087WX48 190 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 CSRP2Q16527 193 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 RASL10AQ92737 203 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 EFNA4P52798 201 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 TPSG1Q9NRR2 321 aa9.72□□□□□ -0.85
SMG6-201ENST00000263073 A0A0G2JNJ9 132 aa9.71□□□□□ -0.85
SMG6-201ENST00000263073 VWC2LB2RUY7 222 aa9.71□□□□□ -0.85
SMG6-201ENST00000263073 AZU1P20160 251 aa9.71□□□□□ -0.85
SMG6-201ENST00000263073 PFN2P35080 140 aa9.71□□□□□ -0.85
SMG6-201ENST00000263073 IGFBPL1Q8WX77 278 aa9.71□□□□□ -0.85
SMG6-201ENST00000263073 RHPN1-AS1Q9BWJ2 59 aa9.71□□□□□ -0.85
SMG6-201ENST00000263073 Q9UFV3 132 aa9.71□□□□□ -0.85
SMG6-201ENST00000263073 TRAV12-2A0A075B6T6 113 aa9.71□□□□□ -0.85
SMG6-201ENST00000263073 SHANK2-AS3Q9BTD1 123 aa9.71□□□□□ -0.86
SMG6-201ENST00000263073 DKK2Q9UBU2 259 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms