RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 C8orf49Q96NF6 230 aa15.28■□□□□ 0.04
SCARB1-201ENST00000261693 SCRT2Q9NQ03 307 aa15.28■□□□□ 0.04
SCARB1-201ENST00000261693 HSPB8Q9UJY1 196 aa15.28■□□□□ 0.04
SCARB1-201ENST00000261693 TMSB15BA0A087X1C1 80 aa15.27■□□□□ 0.04
SCARB1-201ENST00000261693 HLA-DRB1P01911 266 aa15.27■□□□□ 0.04
SCARB1-201ENST00000261693 FCGR2BP31994 310 aaPredicted RBP15.27■□□□□ 0.04
SCARB1-201ENST00000261693 PRR30Q53SZ7 412 aaPredicted RBP15.27■□□□□ 0.04
SCARB1-201ENST00000261693 LDLRAD2Q5SZI1 272 aa15.27■□□□□ 0.04
SCARB1-201ENST00000261693 PET117Q6UWS5 81 aa15.27■□□□□ 0.04
SCARB1-201ENST00000261693 AP5S1Q9NUS5 200 aa15.27■□□□□ 0.04
SCARB1-201ENST00000261693 CEP295Q9C0D2 2601 aa15.27■□□□□ 0.03
SCARB1-201ENST00000261693 TIMM23O14925 209 aa15.27■□□□□ 0.03
SCARB1-201ENST00000261693 SNAI2O43623 268 aa15.27■□□□□ 0.03
SCARB1-201ENST00000261693 FAM106CPP0CH98 169 aa15.27■□□□□ 0.03
SCARB1-201ENST00000261693 RIGQ13278 110 aa15.27■□□□□ 0.03
SCARB1-201ENST00000261693 FAM106AQ4KMX7 169 aa15.27■□□□□ 0.03
SCARB1-201ENST00000261693 BVES-AS1Q5T3Y7 98 aa15.27■□□□□ 0.03
SCARB1-201ENST00000261693 TMEM75Q8N9X5 138 aa15.27■□□□□ 0.03
SCARB1-201ENST00000261693 OR4C5Q8NGB2 326 aa15.27■□□□□ 0.03
SCARB1-201ENST00000261693 ONECUT1Q9UBC0 465 aa15.27■□□□□ 0.03
SCARB1-201ENST00000261693 NBASA2RRP1 2371 aa15.26■□□□□ 0.03
SCARB1-201ENST00000261693 A0A087X0K7 114 aa15.26■□□□□ 0.03
SCARB1-201ENST00000261693 HILPDAQ9Y5L2 63 aa15.26■□□□□ 0.03
SCARB1-201ENST00000261693 WNK2Q9Y3S1 2297 aa15.26■□□□□ 0.03
SCARB1-201ENST00000261693 ANKHD1Q8IWZ3 2542 aaKnown RBP15.26■□□□□ 0.03
SCARB1-201ENST00000261693 IGHV2-70DA0A0C4DH43 119 aa15.26■□□□□ 0.03
SCARB1-201ENST00000261693 H3BRN7 92 aa15.26■□□□□ 0.03
SCARB1-201ENST00000261693 NCR2O95944 276 aa15.26■□□□□ 0.03
SCARB1-201ENST00000261693 FOXE3Q13461 319 aa15.26■□□□□ 0.03
SCARB1-201ENST00000261693 PSG3Q16557 428 aa15.26■□□□□ 0.03
SCARB1-201ENST00000261693 ZNF491Q8N8L2 437 aa15.26■□□□□ 0.03
SCARB1-201ENST00000261693 PRSS3P2Q8NHM4 247 aa15.26■□□□□ 0.03
SCARB1-201ENST00000261693 RNF125Q96EQ8 232 aa15.26■□□□□ 0.03
SCARB1-201ENST00000261693 LOC389332A0A1B0GUA5 103 aa15.25■□□□□ 0.03
SCARB1-201ENST00000261693 SERTM2A0A1B0GWG4 89 aa15.25■□□□□ 0.03
SCARB1-201ENST00000261693 CBY3A6NI87 242 aa15.25■□□□□ 0.03
SCARB1-201ENST00000261693 Q8NA96 180 aa15.25■□□□□ 0.03
SCARB1-201ENST00000261693 SPTA1P02549 2419 aa15.25■□□□□ 0.03
SCARB1-201ENST00000261693 K7EQM0 130 aa15.25■□□□□ 0.03
SCARB1-201ENST00000261693 TAX1BP3O14907 124 aa15.25■□□□□ 0.03
SCARB1-201ENST00000261693 APOBEC3AP31941 199 aaPredicted RBP15.25■□□□□ 0.03
SCARB1-201ENST00000261693 PTPRZ1P23471 2315 aaPredicted RBP15.25■□□□□ 0.03
SCARB1-201ENST00000261693 FA2HQ7L5A8 372 aa15.24■□□□□ 0.03
SCARB1-201ENST00000261693 ZNF414Q96IQ9 312 aa15.24■□□□□ 0.03
SCARB1-201ENST00000261693 ASH1LQ9NR48 2969 aaKnown RBP15.24■□□□□ 0.03
SCARB1-201ENST00000261693 OR2T8A6NH00 312 aa15.24■□□□□ 0.03
SCARB1-201ENST00000261693 IFI27P40305 119 aaPredicted RBP15.24■□□□□ 0.03
SCARB1-201ENST00000261693 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-201ENST00000261693 ARF6P62330 175 aa15.23■□□□□ 0.03
SCARB1-201ENST00000261693 LOXL1Q08397 574 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-201ENST00000261693 ZNF747Q9BV97 191 aa15.23■□□□□ 0.03
SCARB1-201ENST00000261693 MED13LQ71F56 2210 aa15.23■□□□□ 0.03
SCARB1-201ENST00000261693 FXYD7P58549 80 aa15.23■□□□□ 0.03
SCARB1-201ENST00000261693 RBX1P62877 108 aa15.23■□□□□ 0.03
SCARB1-201ENST00000261693 LINC01545Q5VT33 79 aa15.23■□□□□ 0.03
SCARB1-201ENST00000261693 TMEM213A2RRL7 107 aa15.22■□□□□ 0.03
SCARB1-201ENST00000261693 TCTAP57738 103 aa15.22■□□□□ 0.03
SCARB1-201ENST00000261693 TRBV6-1A0A0K0K1D8 114 aa15.22■□□□□ 0.03
SCARB1-201ENST00000261693 LY6LH3BQJ8 138 aa15.22■□□□□ 0.03
SCARB1-201ENST00000261693 LY6HO94772 140 aa15.22■□□□□ 0.03
SCARB1-201ENST00000261693 OR8A1Q8NGG7 326 aa15.22■□□□□ 0.03
SCARB1-201ENST00000261693 B9A039 149 aa15.21■□□□□ 0.03
SCARB1-201ENST00000261693 D6R8Y8 96 aa15.21■□□□□ 0.03
SCARB1-201ENST00000261693 MRPS12O15235 138 aaKnown RBP15.21■□□□□ 0.03
SCARB1-201ENST00000261693 LYZL1Q6UWQ5 148 aa15.21■□□□□ 0.03
SCARB1-201ENST00000261693 LINC01560Q8TB33 94 aa15.21■□□□□ 0.03
SCARB1-201ENST00000261693 CACNA1BQ00975 2339 aa15.21■□□□□ 0.03
SCARB1-201ENST00000261693 CD3EP07766 207 aa15.21■□□□□ 0.03
SCARB1-201ENST00000261693 CT45A10P0DMU9 189 aa15.21■□□□□ 0.03
SCARB1-201ENST00000261693 GNG7O60262 68 aa15.2■□□□□ 0.02
SCARB1-201ENST00000261693 IGHV3-23P01764 117 aa15.2■□□□□ 0.02
SCARB1-201ENST00000261693 C12orf54Q6X4T0 127 aa15.2■□□□□ 0.02
SCARB1-201ENST00000261693 DEFB125Q8N687 156 aa15.2■□□□□ 0.02
SCARB1-201ENST00000261693 OR10AG1Q8NH19 301 aa15.2■□□□□ 0.02
SCARB1-201ENST00000261693 RNF24Q9Y225 148 aa15.2■□□□□ 0.02
SCARB1-201ENST00000261693 CSN1S1P47710 185 aa15.2■□□□□ 0.02
SCARB1-201ENST00000261693 AMN1Q8IY45 258 aa15.2■□□□□ 0.02
SCARB1-201ENST00000261693 MS4A6AQ9H2W1 248 aa15.2■□□□□ 0.02
SCARB1-201ENST00000261693 K7EP13 123 aa15.19■□□□□ 0.02
SCARB1-201ENST00000261693 HES1Q14469 280 aa15.19■□□□□ 0.02
SCARB1-201ENST00000261693 NBR2O15453 112 aa15.19■□□□□ 0.02
SCARB1-201ENST00000261693 KLRD1Q13241 179 aa15.19■□□□□ 0.02
SCARB1-201ENST00000261693 LYPD1Q8N2G4 141 aa15.19■□□□□ 0.02
SCARB1-201ENST00000261693 TRAV30A0A087WSZ9 112 aa15.18■□□□□ 0.02
SCARB1-201ENST00000261693 IGKV2-40A0A087WW87 121 aaPredicted RBP15.18■□□□□ 0.02
SCARB1-201ENST00000261693 A0A096LNJ9 63 aa15.18■□□□□ 0.02
SCARB1-201ENST00000261693 IGKV2D-40P01614 121 aaPredicted RBP15.18■□□□□ 0.02
SCARB1-201ENST00000261693 GPR183P32249 361 aa15.18■□□□□ 0.02
SCARB1-201ENST00000261693 AMMECR1LQ6DCA0 310 aa15.18■□□□□ 0.02
SCARB1-201ENST00000261693 AAMDCQ9H7C9 122 aa15.18■□□□□ 0.02
SCARB1-201ENST00000261693 SIGLEC8Q9NYZ4 499 aa15.18■□□□□ 0.02
SCARB1-201ENST00000261693 TMEM189A5PLL7 270 aa15.18■□□□□ 0.02
SCARB1-201ENST00000261693 RNF151Q2KHN1 245 aa15.18■□□□□ 0.02
SCARB1-201ENST00000261693 WI2-2373I1.2A0A1W2PRP0 233 aa15.17■□□□□ 0.02
SCARB1-201ENST00000261693 HIST1H1AQ02539 215 aaPredicted RBP15.17■□□□□ 0.02
SCARB1-201ENST00000261693 IGFL4Q6B9Z1 124 aa15.17■□□□□ 0.02
SCARB1-201ENST00000261693 RNF5Q99942 180 aa15.17■□□□□ 0.02
SCARB1-201ENST00000261693 SH2D1AO60880 128 aa15.17■□□□□ 0.02
SCARB1-201ENST00000261693 COX8AP10176 69 aa15.17■□□□□ 0.02
SCARB1-201ENST00000261693 C2orf91Q6ZV80 131 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms