RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 IGHV1-69-2A0A0G2JMI3 117 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 A0A1B0GXF2 115 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 ARMS2P0C7Q2 107 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 PCP4P48539 62 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 KLF5Q13887 457 aaPredicted RBP11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 TMEM155Q4W5P6 130 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 ONECUT1Q9UBC0 465 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 CELSR1Q9NYQ6 3014 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 IGHV3-35A0A0C4DH35 117 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 C19orf84I3L1E1 186 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 FCGR2BP31994 310 aaPredicted RBP11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 ATP5L2Q7Z4Y8 100 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 OR4C5Q8NGB2 326 aa11.5□□□□□ -0.57
SFSWAP-201ENST00000261674 IGHV1-3A0A0C4DH29 117 aa11.49□□□□□ -0.57
SFSWAP-201ENST00000261674 TMEM116Q8NCL8 245 aa11.49□□□□□ -0.57
SFSWAP-201ENST00000261674 PRSS3P2Q8NHM4 247 aa11.49□□□□□ -0.57
SFSWAP-201ENST00000261674 USP9YO00507 2555 aaPredicted RBP11.49□□□□□ -0.57
SFSWAP-201ENST00000261674 E7EQL1 145 aa11.49□□□□□ -0.57
SFSWAP-201ENST00000261674 MRGPRG-AS1Q2M3A8 158 aa11.49□□□□□ -0.57
SFSWAP-201ENST00000261674 MAP1LC3CQ9BXW4 147 aa11.49□□□□□ -0.57
SFSWAP-201ENST00000261674 KLF12Q9Y4X4 402 aa11.49□□□□□ -0.57
SFSWAP-201ENST00000261674 LTAP01374 205 aa11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 TMEM191AQ9H0A3 160 aa11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 MRPS16Q9Y3D3 137 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 LOC102724200A0A096LPH7 203 aaPredicted RBP11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 IGHV3-23P01764 117 aa11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 IL4P05112 153 aa11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 Q86TA4 180 aa11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 TEX45Q8NA69 505 aa11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 RNASE8Q8TDE3 154 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 F11RQ9Y624 299 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 COX11Q9Y6N1 276 aa11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 DOPEY1Q5JWR5 2465 aa11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 APOHP02749 345 aaPredicted RBP11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 C3orf36Q3SXR2 165 aa11.48□□□□□ -0.57
SFSWAP-201ENST00000261674 A0A087X0K7 114 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 IGLC1P0CG04 106 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 ARF6P62330 175 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 OR4F17Q8NGA8 305 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 OR8A1Q8NGG7 326 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 ZC2HC1AQ96GY0 325 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 PRSS22Q9GZN4 317 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 HECTD1Q9ULT8 2610 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 PPIAL4CA0A0B4J2A2 164 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 A0A1B0GUT8 65 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 C19orf71A6NCJ1 209 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 INS-IGF2F8WCM5 200 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 CRYGCP07315 174 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 PPIAL4GP0DN37 164 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 SFTPCP11686 197 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 SLC25A34Q6PIV7 304 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 BCL6BQ8N143 479 aaPredicted RBP11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 LINC00311Q8N616 119 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 FA2HQ7L5A8 372 aa11.47□□□□□ -0.57
SFSWAP-201ENST00000261674 BPIFA4PQ86YQ2 179 aa11.46□□□□□ -0.57
SFSWAP-201ENST00000261674 OTORQ9NRC9 128 aa11.46□□□□□ -0.57
SFSWAP-201ENST00000261674 BUB1B-PAK6H3BSN5 160 aa11.46□□□□□ -0.58
SFSWAP-201ENST00000261674 IGKV1-17P01599 117 aa11.46□□□□□ -0.58
SFSWAP-201ENST00000261674 OR5AL1P0C617 328 aa11.46□□□□□ -0.58
SFSWAP-201ENST00000261674 DLX6P56179 175 aa11.46□□□□□ -0.58
SFSWAP-201ENST00000261674 FAM162BQ5T6X4 162 aa11.46□□□□□ -0.58
SFSWAP-201ENST00000261674 IGFL4Q6B9Z1 124 aa11.46□□□□□ -0.58
SFSWAP-201ENST00000261674 AP5S1Q9NUS5 200 aa11.46□□□□□ -0.58
SFSWAP-201ENST00000261674 TIMM23O14925 209 aa11.45□□□□□ -0.58
SFSWAP-201ENST00000261674 UBE2V1Q13404 147 aa11.45□□□□□ -0.58
SFSWAP-201ENST00000261674 ORAOV1Q8WV07 137 aa11.45□□□□□ -0.58
SFSWAP-201ENST00000261674 NGBQ9NPG2 151 aa11.45□□□□□ -0.58
SFSWAP-201ENST00000261674 LIPFP07098 398 aa11.45□□□□□ -0.58
SFSWAP-201ENST00000261674 FBLN7Q53RD9 439 aa11.45□□□□□ -0.58
SFSWAP-201ENST00000261674 FAM120AOSQ5T036 256 aa11.45□□□□□ -0.58
SFSWAP-201ENST00000261674 WFDC3Q8IUB2 231 aa11.45□□□□□ -0.58
SFSWAP-201ENST00000261674 TEX22C9J3V5 150 aa11.45□□□□□ -0.58
SFSWAP-201ENST00000261674 CT45A10P0DMU9 189 aa11.45□□□□□ -0.58
SFSWAP-201ENST00000261674 MUC15Q8N387 334 aa11.45□□□□□ -0.58
SFSWAP-201ENST00000261674 C8orf49Q96NF6 230 aa11.45□□□□□ -0.58
SFSWAP-201ENST00000261674 PSG8Q9UQ74 426 aa11.45□□□□□ -0.58
SFSWAP-201ENST00000261674 GNG7O60262 68 aa11.44□□□□□ -0.58
SFSWAP-201ENST00000261674 FAM106CPP0CH98 169 aa11.44□□□□□ -0.58
SFSWAP-201ENST00000261674 FAM106AQ4KMX7 169 aa11.44□□□□□ -0.58
SFSWAP-201ENST00000261674 TMEM8BA6NDV4 472 aa11.44□□□□□ -0.58
SFSWAP-201ENST00000261674 K7EQM0 130 aa11.44□□□□□ -0.58
SFSWAP-201ENST00000261674 CHCHD1Q96BP2 118 aaKnown RBP11.44□□□□□ -0.58
SFSWAP-201ENST00000261674 OR2T8A6NH00 312 aa11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 NCBP2LA6PVI3 153 aaKnown RBP11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 RIGQ13278 110 aa11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 HIST2H2BCQ6DN03 193 aa11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 TENM4Q6N022 2769 aa11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 TMEM213A2RRL7 107 aa11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 HLA-DRB1P01911 266 aa11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 KLRD1Q13241 179 aa11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 NRGNQ92686 78 aa11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 ZNF492Q9P255 531 aa11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 SHISA9B4DS77 424 aa11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 IFI27P40305 119 aaPredicted RBP11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 FAM71F2Q6NXP2 309 aa11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 HSPB8Q9UJY1 196 aa11.43□□□□□ -0.58
SFSWAP-201ENST00000261674 NDUFS7O75251 213 aa11.42□□□□□ -0.58
SFSWAP-201ENST00000261674 IGLV1-47P01700 117 aa11.42□□□□□ -0.58
SFSWAP-201ENST00000261674 IGLV2-11P01706 119 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms