RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 PIFOQ8TCI5 191 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 C1orf43Q9BWL3 253 aa6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 MRPL20Q9BYC9 149 aaKnown RBP6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 CNOT1A5YKK6 2376 aaKnown RBP6.8□□□□□ -1.32
SNCAIP-201ENST00000261367 CRPP02741 224 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 NDUFV3P56181 108 aaKnown RBP6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 FAM214BQ7L5A3 538 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 C5orf24Q7Z6I8 188 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 CT55Q8WUE5 264 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 CCL13Q99616 98 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 C21orf62Q9NYP8 219 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 C2orf16Q68DN1 1984 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 K7EN84 100 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 M0R381 172 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 Q6ZVH6 145 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 LRRC75A-AS1Q8N1F1 130 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 RASL10AQ92737 203 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 RNF183Q96D59 192 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 H3BT86 120 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 UQCRQO14949 82 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 NDUFS7O75251 213 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 FGF6P10767 208 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 RBMY1FQ15415 496 aaKnown RBP6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 PTH2Q96A98 100 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 CEACAM4O75871 244 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 CTSBP07858 339 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 LTBRP36941 435 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 SYNJ2BPP57105 145 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 MED12Q93074 2177 aa6.79□□□□□ -1.32
SNCAIP-201ENST00000261367 FOXF2Q12947 444 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 ZNF826PQ6ZT77 177 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 ZCCHC24Q8N2G6 241 aaKnown RBP6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 TRAV8-3A0A0A6YYJ7 113 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 CCL11P51671 97 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 MRAPQ8TCY5 172 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 CYYR1Q96J86 154 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 TTTY12Q9BZ98 90 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 MDC1Q14676 2089 aaKnown RBP6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 A0A0B4J2C4 111 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 LEPROTO15243 131 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 ZNHIT1O43257 154 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 ARMS2P0C7Q2 107 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 CFC1BP0CG36 223 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 CFC1P0CG37 223 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 NPC2P61916 151 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 NTN5Q8WTR8 489 aaPredicted RBP6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 ITLN1Q8WWA0 313 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 FAM110AQ9BQ89 295 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 C20orf78Q9BR46 151 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 TRBV25-1A0A075B6N4 114 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 IGHV1OR15-9A0A0B4J2B8 117 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 ZFP36L1Q07352 338 aaKnown RBP6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 TCF15Q12870 199 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 Q6P435 159 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 Q6Q795 121 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 SH2D6Q7Z4S9 175 aa6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 CHCHD2Q9Y6H1 151 aaPredicted RBP6.78□□□□□ -1.32
SNCAIP-201ENST00000261367 TGFBR3LH3BV60 316 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 LTAP01374 205 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 ZNF138P52744 262 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 ARHGEF17Q96PE2 2063 aaPredicted RBP6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 CABIN1Q9Y6J0 2220 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 TRAV12-3A0A0B4J271 114 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 WFDC2Q14508 124 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 FLVCR1-AS1Q8TAF5 88 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 SPAG17Q6Q759 2223 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 KNCNA6PVL3 124 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 VWC2LB2RUY7 222 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 MRPL51Q4U2R6 128 aaKnown RBP6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 TMEM86BQ8N661 226 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 RNF166Q96A37 237 aaPredicted RBP6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 LINC00479Q96M42 142 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 HES7Q9BYE0 225 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 IMUPQ9GZP8 106 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 PRDM6Q9NQX0 595 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 NBEAQ8NFP9 2946 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 TRAV12-1A0A0B4J245 112 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 K7ERJ3 54 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 RNASE2P10153 161 aaKnown RBP6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 CD28P10747 220 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 SNRPD3P62318 126 aaKnown RBP6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 SRSF2Q01130 221 aaKnown RBP6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 C1orf53Q5VUE5 145 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 CARD19Q96LW7 228 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 TIMM21Q9BVV7 248 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 UBL5Q9BZL1 73 aa6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 RPUSD1Q9UJJ7 312 aaKnown RBP6.77□□□□□ -1.33
SNCAIP-201ENST00000261367 ZNF318Q5VUA4 2279 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 NCR2O95944 276 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 PEAR1Q5VY43 1037 aaPredicted RBP6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 TMEM14BQ9NUH8 114 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 IGLV3-12A0A075B6K2 115 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 IGKV3D-15A0A087WSY6 115 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 IGLV3-1P01715 115 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 PRR20EP86478 221 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 PRR20CP86479 221 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 PRR20DP86480 221 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 PRR20BP86481 221 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 PRR20AP86496 221 aa6.76□□□□□ -1.33
SNCAIP-201ENST00000261367 C11orf1Q9H5F2 150 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms