RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 PSG3Q16557 428 aa11.93□□□□□ -0.5
CGREF1-201ENST00000260595 CNPY1Q3B7I2 92 aa11.93□□□□□ -0.5
CGREF1-201ENST00000260595 TMEM88Q6PEY1 159 aa11.93□□□□□ -0.5
CGREF1-201ENST00000260595 Q6ZR54 194 aa11.93□□□□□ -0.5
CGREF1-201ENST00000260595 MGAT4CQ9UBM8 478 aa11.93□□□□□ -0.5
CGREF1-201ENST00000260595 AGPAT2O15120 278 aa11.92□□□□□ -0.5
CGREF1-201ENST00000260595 PRB4P10163 310 aaPredicted RBP11.92□□□□□ -0.5
CGREF1-201ENST00000260595 B2MP61769 119 aa11.92□□□□□ -0.5
CGREF1-201ENST00000260595 HIST1H1AQ02539 215 aaPredicted RBP11.92□□□□□ -0.5
CGREF1-201ENST00000260595 RNF212Q495C1 297 aa11.92□□□□□ -0.5
CGREF1-201ENST00000260595 PXDC1Q5TGL8 231 aa11.92□□□□□ -0.5
CGREF1-201ENST00000260595 GGACTQ9BVM4 153 aa11.92□□□□□ -0.5
CGREF1-201ENST00000260595 LYRM9A8MSI8 78 aa11.91□□□□□ -0.5
CGREF1-201ENST00000260595 S100A7AQ86SG5 101 aa11.91□□□□□ -0.5
CGREF1-201ENST00000260595 C20orf85Q9H1P6 137 aa11.91□□□□□ -0.5
CGREF1-201ENST00000260595 IGLV2-18A0A075B6J9 118 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 PRSS29PA6NIE9 313 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 CCSO14618 274 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 GOSR2O14653 212 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 CXCL2P19875 107 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 MORN5Q5VZ52 161 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 LINC00305Q7Z4B0 112 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 ZNF546Q86UE3 836 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 UBE2DNLQ8IWF7 75 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 LRRC20Q8TCA0 184 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 TMEM37Q8WXS4 190 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 RPUSD4Q96CM3 377 aaKnown RBP11.9□□□□□ -0.5
CGREF1-201ENST00000260595 MGST2Q99735 147 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 C11orf1Q9H5F2 150 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 ZNF331Q9NQX6 463 aaPredicted RBP11.9□□□□□ -0.5
CGREF1-201ENST00000260595 RNF24Q9Y225 148 aa11.9□□□□□ -0.5
CGREF1-201ENST00000260595 LYRM1O43325 122 aa11.89□□□□□ -0.51
CGREF1-201ENST00000260595 SNRPCP09234 159 aaKnown RBP11.89□□□□□ -0.51
CGREF1-201ENST00000260595 RHOBP62745 196 aa11.89□□□□□ -0.51
CGREF1-201ENST00000260595 FCN2Q15485 313 aa11.89□□□□□ -0.51
CGREF1-201ENST00000260595 LINC01587Q99440 93 aa11.89□□□□□ -0.51
CGREF1-201ENST00000260595 PCLOQ9Y6V0 5065 aa11.89□□□□□ -0.51
CGREF1-201ENST00000260595 DYNC1H1Q14204 4646 aaKnown RBP11.88□□□□□ -0.51
CGREF1-201ENST00000260595 TCRBP04435 133 aa11.88□□□□□ -0.51
CGREF1-201ENST00000260595 DEFB130BP0DP73 79 aa11.88□□□□□ -0.51
CGREF1-201ENST00000260595 DEFB130AP0DP74 79 aa11.88□□□□□ -0.51
CGREF1-201ENST00000260595 TAS2R60P59551 318 aa11.88□□□□□ -0.51
CGREF1-201ENST00000260595 LCN15Q6UWW0 184 aa11.88□□□□□ -0.51
CGREF1-201ENST00000260595 TMEM256Q8N2U0 113 aa11.88□□□□□ -0.51
CGREF1-201ENST00000260595 CDKN1BP46527 198 aa11.87□□□□□ -0.51
CGREF1-201ENST00000260595 OPCMLQ14982 345 aa11.87□□□□□ -0.51
CGREF1-201ENST00000260595 BPIFA4PQ86YQ2 179 aa11.87□□□□□ -0.51
CGREF1-201ENST00000260595 C15orf53Q8NAA6 179 aa11.87□□□□□ -0.51
CGREF1-201ENST00000260595 ZNF431Q8TF32 576 aaPredicted RBP11.87□□□□□ -0.51
CGREF1-201ENST00000260595 SEC22CQ9BRL7 303 aa11.87□□□□□ -0.51
CGREF1-201ENST00000260595 SLC50A1Q9BRV3 221 aa11.87□□□□□ -0.51
CGREF1-201ENST00000260595 LSM5Q9Y4Y9 91 aaKnown RBP11.87□□□□□ -0.51
CGREF1-201ENST00000260595 PKHD1P08F94 4074 aa11.86□□□□□ -0.51
CGREF1-201ENST00000260595 TRAV6A0A075B6T7 132 aa11.86□□□□□ -0.51
CGREF1-201ENST00000260595 PRAC2D3DTV9 90 aa11.86□□□□□ -0.51
CGREF1-201ENST00000260595 H3BTX0 84 aa11.86□□□□□ -0.51
CGREF1-201ENST00000260595 L7N2F9 121 aa11.86□□□□□ -0.51
CGREF1-201ENST00000260595 SLC17A3O00476 420 aa11.86□□□□□ -0.51
CGREF1-201ENST00000260595 COX7A2P2O60397 106 aa11.86□□□□□ -0.51
CGREF1-201ENST00000260595 IGLC2P0DOY2 106 aa11.86□□□□□ -0.51
CGREF1-201ENST00000260595 VAMP2P63027 116 aa11.86□□□□□ -0.51
CGREF1-201ENST00000260595 ZNF846Q147U1 533 aa11.86□□□□□ -0.51
CGREF1-201ENST00000260595 KIR3DS1Q14943 382 aa11.86□□□□□ -0.51
CGREF1-201ENST00000260595 SAT2Q96F10 170 aaPredicted RBP11.86□□□□□ -0.51
CGREF1-201ENST00000260595 PPP1R14DQ9NXH3 145 aa11.86□□□□□ -0.51
CGREF1-201ENST00000260595 DNAH11Q96DT5 4516 aa11.86□□□□□ -0.51
CGREF1-201ENST00000260595 PKD1P98161 4303 aa11.85□□□□□ -0.51
CGREF1-201ENST00000260595 FAM24AA6NFZ4 105 aa11.85□□□□□ -0.51
CGREF1-201ENST00000260595 FAM25EA8MYX2 175 aa11.85□□□□□ -0.51
CGREF1-201ENST00000260595 H3BQ15 152 aa11.85□□□□□ -0.51
CGREF1-201ENST00000260595 CST7O76096 145 aa11.85□□□□□ -0.51
CGREF1-201ENST00000260595 CAMLGP49069 296 aa11.85□□□□□ -0.51
CGREF1-201ENST00000260595 IL15RAQ13261 267 aa11.85□□□□□ -0.51
CGREF1-201ENST00000260595 C10orf113Q5VZT2 155 aa11.85□□□□□ -0.51
CGREF1-201ENST00000260595 NRARPQ7Z6K4 114 aa11.85□□□□□ -0.51
CGREF1-201ENST00000260595 RNASE8Q8TDE3 154 aaKnown RBP11.85□□□□□ -0.51
CGREF1-201ENST00000260595 C16orf74Q96GX8 76 aa11.85□□□□□ -0.51
CGREF1-201ENST00000260595 DNAJC4Q9NNZ3 241 aa11.85□□□□□ -0.51
CGREF1-201ENST00000260595 NUDT15Q9NV35 164 aa11.85□□□□□ -0.51
CGREF1-201ENST00000260595 WDR83OSQ9Y284 106 aa11.85□□□□□ -0.51
CGREF1-201ENST00000260595 TRAV5A0A0B4J249 113 aa11.84□□□□□ -0.51
CGREF1-201ENST00000260595 C5orf51A6NDU8 294 aa11.84□□□□□ -0.51
CGREF1-201ENST00000260595 CBY3A6NI87 242 aa11.84□□□□□ -0.51
CGREF1-201ENST00000260595 F5H768 121 aa11.84□□□□□ -0.51
CGREF1-201ENST00000260595 HTN1P15515 57 aa11.84□□□□□ -0.51
CGREF1-201ENST00000260595 BCAP31P51572 246 aa11.84□□□□□ -0.51
CGREF1-201ENST00000260595 CAV2P51636 162 aa11.84□□□□□ -0.51
CGREF1-201ENST00000260595 FAM3BP58499 235 aaPredicted RBP11.84□□□□□ -0.51
CGREF1-201ENST00000260595 VWC2Q2TAL6 325 aa11.84□□□□□ -0.51
CGREF1-201ENST00000260595 MIC13Q5XKP0 118 aa11.84□□□□□ -0.51
CGREF1-201ENST00000260595 C12orf45Q8N5I9 185 aaPredicted RBP11.84□□□□□ -0.51
CGREF1-201ENST00000260595 C2orf50Q96LR7 162 aa11.84□□□□□ -0.51
CGREF1-201ENST00000260595 PARD6GQ9BYG4 376 aaPredicted RBP11.84□□□□□ -0.51
CGREF1-201ENST00000260595 TIMM8BQ9Y5J9 83 aaPredicted RBP11.84□□□□□ -0.51
CGREF1-201ENST00000260595 ATP5G1P05496 136 aa11.83□□□□□ -0.52
CGREF1-201ENST00000260595 ATP5G3P48201 142 aa11.83□□□□□ -0.52
CGREF1-201ENST00000260595 ZNF493Q6ZR52 646 aa11.83□□□□□ -0.52
CGREF1-201ENST00000260595 C20orf144Q9BQM9 153 aa11.83□□□□□ -0.52
CGREF1-201ENST00000260595 UQCC1Q9NVA1 299 aa11.83□□□□□ -0.52
CGREF1-201ENST00000260595 NDUFA13Q9P0J0 144 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms