RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CTAG1AP78358 180 aa11.89□□□□□ -0.51
CCDC90B-201ENST00000260054 LCN15Q6UWW0 184 aa11.89□□□□□ -0.51
CCDC90B-201ENST00000260054 OR51M1Q9H341 326 aa11.89□□□□□ -0.51
CCDC90B-201ENST00000260054 MAP1LC3B2A6NCE7 125 aa11.88□□□□□ -0.51
CCDC90B-201ENST00000260054 WIPF1O43516 503 aa11.88□□□□□ -0.51
CCDC90B-201ENST00000260054 OR10J4P0C629 311 aa11.88□□□□□ -0.51
CCDC90B-201ENST00000260054 ARL14EPLP0DKL9 152 aa11.88□□□□□ -0.51
CCDC90B-201ENST00000260054 IGLC2P0DOY2 106 aa11.88□□□□□ -0.51
CCDC90B-201ENST00000260054 OXLD1Q5BKU9 147 aa11.88□□□□□ -0.51
CCDC90B-201ENST00000260054 RBPMS2Q6ZRY4 209 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-201ENST00000260054 PAXXQ9BUH6 204 aa11.88□□□□□ -0.51
CCDC90B-201ENST00000260054 MAP1LC3BQ9GZQ8 125 aa11.88□□□□□ -0.51
CCDC90B-201ENST00000260054 ZNF705EA8MWA4 302 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 H3BQ15 152 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 CD5P06127 495 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 FGF8P55075 233 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 PQLC2Q6ZP29 291 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 GBGT1Q8N5D6 347 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 STXBP6Q8NFX7 210 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 SFT2D1Q8WV19 159 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 MBD3L1Q8WWY6 194 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 FXYD5Q96DB9 178 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 TRAV25A0A0B4J276 109 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 ZNF785A8K8V0 405 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 H3BTX0 84 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 OR2K2Q8NGT1 345 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 MS4A6AQ9H2W1 248 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 HRH4Q9H3N8 390 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 NRN1Q9NPD7 142 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 ZNF586Q9NXT0 402 aa11.87□□□□□ -0.51
CCDC90B-201ENST00000260054 A0A087X0K7 114 aa11.86□□□□□ -0.51
CCDC90B-201ENST00000260054 A0A1B0GV50 99 aa11.86□□□□□ -0.51
CCDC90B-201ENST00000260054 FAM74A7A6NL05 159 aa11.86□□□□□ -0.51
CCDC90B-201ENST00000260054 CXorf1O96002 111 aa11.86□□□□□ -0.51
CCDC90B-201ENST00000260054 HIST1H1EP10412 219 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-201ENST00000260054 UBE2L3P68036 154 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-201ENST00000260054 FAM74A3Q4VXF1 159 aa11.86□□□□□ -0.51
CCDC90B-201ENST00000260054 LCN12Q6JVE5 192 aa11.86□□□□□ -0.51
CCDC90B-201ENST00000260054 SVBPQ8N300 66 aa11.86□□□□□ -0.51
CCDC90B-201ENST00000260054 DCANP1Q8TF63 244 aa11.86□□□□□ -0.51
CCDC90B-201ENST00000260054 GCHFRP30047 84 aa11.85□□□□□ -0.51
CCDC90B-201ENST00000260054 TFPI2P48307 235 aa11.85□□□□□ -0.51
CCDC90B-201ENST00000260054 WFDC3Q8IUB2 231 aa11.85□□□□□ -0.51
CCDC90B-201ENST00000260054 SPAG8Q99932 426 aaPredicted RBP11.85□□□□□ -0.51
CCDC90B-201ENST00000260054 TMPRSS5Q9H3S3 457 aa11.85□□□□□ -0.51
CCDC90B-201ENST00000260054 TRBV19A0A075B6N1 114 aa11.84□□□□□ -0.51
CCDC90B-201ENST00000260054 TMEM218A2RU14 115 aa11.84□□□□□ -0.51
CCDC90B-201ENST00000260054 SLC17A3O00476 420 aa11.84□□□□□ -0.51
CCDC90B-201ENST00000260054 SOCS3O14543 225 aa11.84□□□□□ -0.51
CCDC90B-201ENST00000260054 NBEAP1P0C6P0 100 aa11.84□□□□□ -0.51
CCDC90B-201ENST00000260054 GUCA2BQ16661 112 aa11.84□□□□□ -0.51
CCDC90B-201ENST00000260054 C10orf91Q5T1B1 145 aa11.84□□□□□ -0.51
CCDC90B-201ENST00000260054 BLNKQ8WV28 456 aa11.84□□□□□ -0.51
CCDC90B-201ENST00000260054 GPR61Q9BZJ8 451 aa11.84□□□□□ -0.51
CCDC90B-201ENST00000260054 G3V4G9 280 aa11.84□□□□□ -0.51
CCDC90B-201ENST00000260054 SAT2Q96F10 170 aaPredicted RBP11.84□□□□□ -0.51
CCDC90B-201ENST00000260054 ZNF256Q9Y2P7 627 aaPredicted RBP11.84□□□□□ -0.51
CCDC90B-201ENST00000260054 CARHSP1Q9Y2V2 147 aaKnown RBP11.84□□□□□ -0.51
CCDC90B-201ENST00000260054 MGAM2Q2M2H8 2515 aa11.83□□□□□ -0.51
CCDC90B-201ENST00000260054 TRAV1-1A0A0B4J248 108 aa11.83□□□□□ -0.52
CCDC90B-201ENST00000260054 K7EQG2 157 aa11.83□□□□□ -0.52
CCDC90B-201ENST00000260054 NDUFB4O95168 129 aa11.83□□□□□ -0.52
CCDC90B-201ENST00000260054 PAFAH1B2P68402 229 aa11.83□□□□□ -0.52
CCDC90B-201ENST00000260054 BLOC1S1P78537 153 aa11.83□□□□□ -0.52
CCDC90B-201ENST00000260054 CCL20P78556 96 aa11.83□□□□□ -0.52
CCDC90B-201ENST00000260054 GUK1Q16774 197 aa11.83□□□□□ -0.52
CCDC90B-201ENST00000260054 SAMD5Q5TGI4 173 aa11.83□□□□□ -0.52
CCDC90B-201ENST00000260054 FAM24BQ8N5W8 94 aa11.83□□□□□ -0.52
CCDC90B-201ENST00000260054 MEOX2P50222 304 aa11.82□□□□□ -0.52
CCDC90B-201ENST00000260054 IGFL4Q6B9Z1 124 aa11.82□□□□□ -0.52
CCDC90B-201ENST00000260054 ZNF331Q9NQX6 463 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-201ENST00000260054 TMEM167BQ9NRX6 74 aa11.82□□□□□ -0.52
CCDC90B-201ENST00000260054 TRAV2A0A0B4J234 112 aa11.81□□□□□ -0.52
CCDC90B-201ENST00000260054 TRAV8-2A0A0B4J237 113 aa11.81□□□□□ -0.52
CCDC90B-201ENST00000260054 PDE6HQ13956 83 aa11.81□□□□□ -0.52
CCDC90B-201ENST00000260054 BEAN1Q3B7T3 259 aa11.81□□□□□ -0.52
CCDC90B-201ENST00000260054 C16orf92Q96LL3 132 aa11.81□□□□□ -0.52
CCDC90B-201ENST00000260054 SAV1Q9H4B6 383 aaPredicted RBP11.81□□□□□ -0.52
CCDC90B-201ENST00000260054 SORL1Q92673 2214 aa11.81□□□□□ -0.52
CCDC90B-201ENST00000260054 OR4C46A6NHA9 309 aa11.81□□□□□ -0.52
CCDC90B-201ENST00000260054 ZNF253O75346 499 aa11.81□□□□□ -0.52
CCDC90B-201ENST00000260054 HBE1P02100 147 aa11.81□□□□□ -0.52
CCDC90B-201ENST00000260054 S100A12P80511 92 aa11.81□□□□□ -0.52
CCDC90B-201ENST00000260054 EGFEM1PQ0D2K5 195 aa11.81□□□□□ -0.52
CCDC90B-201ENST00000260054 LYPD6BQ8NI32 183 aa11.81□□□□□ -0.52
CCDC90B-201ENST00000260054 ISLRO14498 428 aa11.8□□□□□ -0.52
CCDC90B-201ENST00000260054 SNAPINO95295 136 aa11.8□□□□□ -0.52
CCDC90B-201ENST00000260054 HLA-DMBP28068 263 aa11.8□□□□□ -0.52
CCDC90B-201ENST00000260054 PSMB3P49720 205 aa11.8□□□□□ -0.52
CCDC90B-201ENST00000260054 KRTAP10-11P60412 298 aa11.8□□□□□ -0.52
CCDC90B-201ENST00000260054 RANP62826 216 aaKnown RBP11.8□□□□□ -0.52
CCDC90B-201ENST00000260054 RNF182Q8N6D2 247 aa11.8□□□□□ -0.52
CCDC90B-201ENST00000260054 SLC50A1Q9BRV3 221 aa11.8□□□□□ -0.52
CCDC90B-201ENST00000260054 CD7P09564 240 aa11.79□□□□□ -0.52
CCDC90B-201ENST00000260054 ZNF688P0C7X2 276 aa11.79□□□□□ -0.52
CCDC90B-201ENST00000260054 UBE2G2P60604 165 aa11.79□□□□□ -0.52
CCDC90B-201ENST00000260054 EXOC3-AS1Q8N2X6 119 aa11.79□□□□□ -0.52
CCDC90B-201ENST00000260054 C20orf173Q96LM9 149 aa11.79□□□□□ -0.52
CCDC90B-201ENST00000260054 SEC11CQ9BY50 192 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms