RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 CD28P10747 220 aa13.38□□□□□ -0.27
SRSF1-201ENST00000258962 CRYBB3P26998 211 aa13.38□□□□□ -0.27
SRSF1-201ENST00000258962 RANP62826 216 aaKnown RBP13.38□□□□□ -0.27
SRSF1-201ENST00000258962 RPL23P62829 140 aaKnown RBP13.38□□□□□ -0.27
SRSF1-201ENST00000258962 SLC35B1P78383 322 aa13.38□□□□□ -0.27
SRSF1-201ENST00000258962 FOXE3Q13461 319 aa13.38□□□□□ -0.27
SRSF1-201ENST00000258962 MYOZ3Q8TDC0 251 aa13.38□□□□□ -0.27
SRSF1-201ENST00000258962 TRBV20OR9-2A0A075B6H5 130 aa13.37□□□□□ -0.27
SRSF1-201ENST00000258962 RPLP1P05386 114 aaKnown RBP13.37□□□□□ -0.27
SRSF1-201ENST00000258962 ELANEP08246 267 aa13.37□□□□□ -0.27
SRSF1-201ENST00000258962 FOLR2P14207 255 aa13.37□□□□□ -0.27
SRSF1-201ENST00000258962 TEX38Q6PEX7 206 aa13.37□□□□□ -0.27
SRSF1-201ENST00000258962 C2CD4CQ8TF44 421 aa13.37□□□□□ -0.27
SRSF1-201ENST00000258962 TRBV19A0A075B6N1 114 aa13.36□□□□□ -0.27
SRSF1-201ENST00000258962 C9JCJ5 164 aa13.36□□□□□ -0.27
SRSF1-201ENST00000258962 S100PP25815 95 aa13.36□□□□□ -0.27
SRSF1-201ENST00000258962 RNF152Q8N8N0 203 aa13.36□□□□□ -0.27
SRSF1-201ENST00000258962 OR4F17Q8NGA8 305 aa13.36□□□□□ -0.27
SRSF1-201ENST00000258962 WIPF2Q8TF74 440 aaPredicted RBP13.36□□□□□ -0.27
SRSF1-201ENST00000258962 C17orf77Q96MU5 243 aa13.36□□□□□ -0.27
SRSF1-201ENST00000258962 OR5B12Q96R08 314 aa13.36□□□□□ -0.27
SRSF1-201ENST00000258962 Q9H3A6 140 aa13.36□□□□□ -0.27
SRSF1-201ENST00000258962 MLXQ9UH92 298 aa13.36□□□□□ -0.27
SRSF1-201ENST00000258962 HELTA6NFD8 242 aa13.35□□□□□ -0.27
SRSF1-201ENST00000258962 NDUFA4O00483 81 aa13.35□□□□□ -0.27
SRSF1-201ENST00000258962 UNQ9165/PRO28630Q6UXU0 137 aa13.35□□□□□ -0.27
SRSF1-201ENST00000258962 HIST1H2BAQ96A08 127 aa13.35□□□□□ -0.27
SRSF1-201ENST00000258962 BTF3L4Q96K17 158 aa13.35□□□□□ -0.27
SRSF1-201ENST00000258962 U3KQE9 123 aa13.35□□□□□ -0.27
SRSF1-201ENST00000258962 WNK1Q9H4A3 2382 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 PGPA6NDG6 321 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 H7BYZ3 331 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 SLC17A3O00476 420 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 ZNF207O43670 478 aaKnown RBP13.34□□□□□ -0.27
SRSF1-201ENST00000258962 BUB3O43684 328 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 APOHP02749 345 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-201ENST00000258962 RPL35P42766 123 aaKnown RBP13.34□□□□□ -0.27
SRSF1-201ENST00000258962 NSUN5P1Q3KNT7 163 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 FAM209BQ5JX69 171 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 HIST2H2BDQ6DRA6 164 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 FAM24BQ8N5W8 94 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 CITED2Q99967 270 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-201ENST00000258962 PEF1Q9UBV8 284 aaKnown RBP13.34□□□□□ -0.27
SRSF1-201ENST00000258962 SMAD5-AS1Q9Y6J3 95 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 PGPEP1LA6NFU8 196 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 PEX7O00628 323 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 S100A9P06702 114 aaKnown RBP13.34□□□□□ -0.27
SRSF1-201ENST00000258962 RPL7P18124 248 aaKnown RBP13.34□□□□□ -0.27
SRSF1-201ENST00000258962 RAB5AP20339 215 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 TAS2R60P59551 318 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 GNG5P63218 68 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 LINC01551Q86U37 167 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 NDUFA11Q86Y39 141 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 ISOC2Q96AB3 205 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 METTL26Q96S19 204 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 OTORQ9NRC9 128 aa13.34□□□□□ -0.27
SRSF1-201ENST00000258962 C1orf196B1AJZ1 125 aa13.33□□□□□ -0.28
SRSF1-201ENST00000258962 GGCTO75223 188 aaKnown RBP13.33□□□□□ -0.28
SRSF1-201ENST00000258962 SLC25A5P05141 298 aaKnown RBP13.33□□□□□ -0.28
SRSF1-201ENST00000258962 CNN1P51911 297 aaKnown RBP13.33□□□□□ -0.28
SRSF1-201ENST00000258962 RAB5BP61020 215 aa13.33□□□□□ -0.28
SRSF1-201ENST00000258962 FLI1Q01543 452 aaPredicted RBP13.33□□□□□ -0.28
SRSF1-201ENST00000258962 KHDC1LQ5JSQ8 128 aa13.33□□□□□ -0.28
SRSF1-201ENST00000258962 SIGLEC15Q6ZMC9 328 aa13.33□□□□□ -0.28
SRSF1-201ENST00000258962 OR8I2Q8N0Y5 310 aa13.33□□□□□ -0.28
SRSF1-201ENST00000258962 EPDR1Q9UM22 224 aa13.33□□□□□ -0.28
SRSF1-201ENST00000258962 IGHV3-66A0A0C4DH42 116 aa13.32□□□□□ -0.28
SRSF1-201ENST00000258962 GNG4P50150 75 aa13.32□□□□□ -0.28
SRSF1-201ENST00000258962 KCNIP4Q6PIL6 250 aa13.32□□□□□ -0.28
SRSF1-201ENST00000258962 EXOC3-AS1Q8N2X6 119 aa13.32□□□□□ -0.28
SRSF1-201ENST00000258962 C5orf17Q8NAS9 161 aa13.32□□□□□ -0.28
SRSF1-201ENST00000258962 TSSC4Q9Y5U2 329 aaPredicted RBP13.32□□□□□ -0.28
SRSF1-201ENST00000258962 IGHV3OR16-13A0A075B7E8 117 aa13.31□□□□□ -0.28
SRSF1-201ENST00000258962 IGHV3-49A0A0A0MS15 119 aa13.31□□□□□ -0.28
SRSF1-201ENST00000258962 IGHV3-74A0A0B4J1X5 117 aa13.31□□□□□ -0.28
SRSF1-201ENST00000258962 CENPWQ5EE01 88 aa13.31□□□□□ -0.28
SRSF1-201ENST00000258962 LYPD1Q8N2G4 141 aa13.31□□□□□ -0.28
SRSF1-201ENST00000258962 IGF2BP2-AS1Q96M15 143 aa13.31□□□□□ -0.28
SRSF1-201ENST00000258962 LINC00479Q96M42 142 aa13.31□□□□□ -0.28
SRSF1-201ENST00000258962 IMMP2LQ96T52 175 aa13.31□□□□□ -0.28
SRSF1-201ENST00000258962 AURKAIP1Q9NWT8 199 aaPredicted RBP13.31□□□□□ -0.28
SRSF1-201ENST00000258962 MGAM2Q2M2H8 2515 aa13.31□□□□□ -0.28
SRSF1-201ENST00000258962 A0A1W2PRX2 142 aa13.3□□□□□ -0.28
SRSF1-201ENST00000258962 LGALS1P09382 135 aaKnown RBP13.3□□□□□ -0.28
SRSF1-201ENST00000258962 PDE6HQ13956 83 aa13.3□□□□□ -0.28
SRSF1-201ENST00000258962 ELOBQ15370 118 aa13.3□□□□□ -0.28
SRSF1-201ENST00000258962 TCTEX1D4Q5JR98 221 aa13.3□□□□□ -0.28
SRSF1-201ENST00000258962 C1orf194Q5T5A4 169 aa13.3□□□□□ -0.28
SRSF1-201ENST00000258962 OCC1Q8TAD7 63 aa13.3□□□□□ -0.28
SRSF1-201ENST00000258962 UBE2E2Q96LR5 201 aa13.3□□□□□ -0.28
SRSF1-201ENST00000258962 YPEL4Q96NS1 127 aa13.3□□□□□ -0.28
SRSF1-201ENST00000258962 A0A087X0K7 114 aa13.29□□□□□ -0.28
SRSF1-201ENST00000258962 GPR82Q96P67 336 aa13.29□□□□□ -0.28
SRSF1-201ENST00000258962 ATG101Q9BSB4 218 aa13.29□□□□□ -0.28
SRSF1-201ENST00000258962 RPH3ALQ9UNE2 315 aa13.29□□□□□ -0.28
SRSF1-201ENST00000258962 TRBV24-1A0A075B6N3 115 aa13.29□□□□□ -0.28
SRSF1-201ENST00000258962 TRAV34A0A0B4J273 112 aa13.29□□□□□ -0.28
SRSF1-201ENST00000258962 K7EN84 100 aa13.29□□□□□ -0.28
SRSF1-201ENST00000258962 IGLV2-8P01709 118 aa13.29□□□□□ -0.28
SRSF1-201ENST00000258962 TCRAP04437 139 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms