RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 FNDC10F2Z333 226 aa13.46□□□□□ -0.25
TM6SF1-201ENST00000258909 GOSR2O14653 212 aa13.46□□□□□ -0.25
TM6SF1-201ENST00000258909 AZU1P20160 251 aa13.46□□□□□ -0.25
TM6SF1-201ENST00000258909 TAS2R30P59541 319 aa13.46□□□□□ -0.25
TM6SF1-201ENST00000258909 LINC00336Q6ZUF6 198 aa13.46□□□□□ -0.25
TM6SF1-201ENST00000258909 OR8A1Q8NGG7 326 aa13.46□□□□□ -0.25
TM6SF1-201ENST00000258909 BOLA2-SMG1P6H3BVE0 249 aa13.45□□□□□ -0.26
TM6SF1-201ENST00000258909 K7EPK0 472 aa13.45□□□□□ -0.26
TM6SF1-201ENST00000258909 AGPAT2O15120 278 aa13.45□□□□□ -0.26
TM6SF1-201ENST00000258909 MRPS12O15235 138 aaKnown RBP13.45□□□□□ -0.26
TM6SF1-201ENST00000258909 FCN2Q15485 313 aa13.45□□□□□ -0.26
TM6SF1-201ENST00000258909 PSG3Q16557 428 aa13.45□□□□□ -0.26
TM6SF1-201ENST00000258909 PPP1R14DQ9NXH3 145 aa13.45□□□□□ -0.26
TM6SF1-201ENST00000258909 PKD1P98161 4303 aa13.44□□□□□ -0.26
TM6SF1-201ENST00000258909 TRAV6A0A075B6T7 132 aa13.44□□□□□ -0.26
TM6SF1-201ENST00000258909 FAM25EA8MYX2 175 aa13.44□□□□□ -0.26
TM6SF1-201ENST00000258909 H3BTX0 84 aa13.44□□□□□ -0.26
TM6SF1-201ENST00000258909 RTL8CO15255 209 aa13.44□□□□□ -0.26
TM6SF1-201ENST00000258909 DEFB130BP0DP73 79 aa13.44□□□□□ -0.26
TM6SF1-201ENST00000258909 DEFB130AP0DP74 79 aa13.44□□□□□ -0.26
TM6SF1-201ENST00000258909 LINC00305Q7Z4B0 112 aa13.44□□□□□ -0.26
TM6SF1-201ENST00000258909 LSM5Q9Y4Y9 91 aaKnown RBP13.44□□□□□ -0.26
TM6SF1-201ENST00000258909 NACAE9PAV3 2078 aa13.44□□□□□ -0.26
TM6SF1-201ENST00000258909 LYRM1O43325 122 aa13.43□□□□□ -0.26
TM6SF1-201ENST00000258909 HTN1P15515 57 aa13.43□□□□□ -0.26
TM6SF1-201ENST00000258909 S100A7AQ86SG5 101 aa13.43□□□□□ -0.26
TM6SF1-201ENST00000258909 ZNF546Q86UE3 836 aa13.43□□□□□ -0.26
TM6SF1-201ENST00000258909 RPUSD4Q96CM3 377 aaKnown RBP13.43□□□□□ -0.26
TM6SF1-201ENST00000258909 LINC01587Q99440 93 aa13.43□□□□□ -0.26
TM6SF1-201ENST00000258909 MGST2Q99735 147 aa13.43□□□□□ -0.26
TM6SF1-201ENST00000258909 DYNC1H1Q14204 4646 aaKnown RBP13.43□□□□□ -0.26
TM6SF1-201ENST00000258909 A0A1B0GVY2 172 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 PRSS29PA6NIE9 313 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 L7N2F9 121 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 BCAP31P51572 246 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 VAMP2P63027 116 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 ZNF846Q147U1 533 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 CNPY1Q3B7I2 92 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 MORN5Q5VZ52 161 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 TMEM37Q8WXS4 190 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 SEC22CQ9BRL7 303 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 PLAC8L1A1L4L8 177 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 COX7A2P2O60397 106 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 TCRBP04435 133 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 LGALS9BQ3B8N2 356 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 PXDC1Q5TGL8 231 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 GGACTQ9BVM4 153 aa13.42□□□□□ -0.26
TM6SF1-201ENST00000258909 PCLOQ9Y6V0 5065 aa13.41□□□□□ -0.26
TM6SF1-201ENST00000258909 DNAH11Q96DT5 4516 aa13.41□□□□□ -0.26
TM6SF1-201ENST00000258909 C5orf51A6NDU8 294 aa13.41□□□□□ -0.26
TM6SF1-201ENST00000258909 LYRM9A8MSI8 78 aa13.41□□□□□ -0.26
TM6SF1-201ENST00000258909 CST7O76096 145 aa13.41□□□□□ -0.26
TM6SF1-201ENST00000258909 CAV2P51636 162 aa13.41□□□□□ -0.26
TM6SF1-201ENST00000258909 B2MP61769 119 aa13.41□□□□□ -0.26
TM6SF1-201ENST00000258909 PARD6GQ9BYG4 376 aaPredicted RBP13.41□□□□□ -0.26
TM6SF1-201ENST00000258909 ZNF331Q9NQX6 463 aaPredicted RBP13.41□□□□□ -0.26
TM6SF1-201ENST00000258909 FAM24AA6NFZ4 105 aa13.4□□□□□ -0.26
TM6SF1-201ENST00000258909 SLC17A3O00476 420 aa13.4□□□□□ -0.26
TM6SF1-201ENST00000258909 TSPOP30536 169 aa13.4□□□□□ -0.26
TM6SF1-201ENST00000258909 KIR3DS1Q14943 382 aa13.4□□□□□ -0.26
TM6SF1-201ENST00000258909 OPCMLQ14982 345 aa13.4□□□□□ -0.26
TM6SF1-201ENST00000258909 LCN15Q6UWW0 184 aa13.4□□□□□ -0.26
TM6SF1-201ENST00000258909 ZNF431Q8TF32 576 aaPredicted RBP13.4□□□□□ -0.26
TM6SF1-201ENST00000258909 NUDT15Q9NV35 164 aa13.4□□□□□ -0.26
TM6SF1-201ENST00000258909 PRAC2D3DTV9 90 aa13.39□□□□□ -0.27
TM6SF1-201ENST00000258909 CAMLGP49069 296 aa13.39□□□□□ -0.27
TM6SF1-201ENST00000258909 RNF212Q495C1 297 aa13.39□□□□□ -0.27
TM6SF1-201ENST00000258909 C10orf113Q5VZT2 155 aa13.39□□□□□ -0.27
TM6SF1-201ENST00000258909 Q6ZR54 194 aa13.39□□□□□ -0.27
TM6SF1-201ENST00000258909 BPIFA4PQ86YQ2 179 aa13.39□□□□□ -0.27
TM6SF1-201ENST00000258909 RNF24Q9Y225 148 aa13.39□□□□□ -0.27
TM6SF1-201ENST00000258909 TRAV5A0A0B4J249 113 aa13.38□□□□□ -0.27
TM6SF1-201ENST00000258909 F5H768 121 aa13.38□□□□□ -0.27
TM6SF1-201ENST00000258909 CXCL2P19875 107 aa13.38□□□□□ -0.27
TM6SF1-201ENST00000258909 CDKN1BP46527 198 aa13.38□□□□□ -0.27
TM6SF1-201ENST00000258909 TAS2R60P59551 318 aa13.38□□□□□ -0.27
TM6SF1-201ENST00000258909 MIC13Q5XKP0 118 aa13.38□□□□□ -0.27
TM6SF1-201ENST00000258909 NRARPQ7Z6K4 114 aa13.38□□□□□ -0.27
TM6SF1-201ENST00000258909 SLC50A1Q9BRV3 221 aa13.38□□□□□ -0.27
TM6SF1-201ENST00000258909 C11orf1Q9H5F2 150 aa13.38□□□□□ -0.27
TM6SF1-201ENST00000258909 H3BQ15 152 aa13.37□□□□□ -0.27
TM6SF1-201ENST00000258909 TMEM256Q8N2U0 113 aa13.37□□□□□ -0.27
TM6SF1-201ENST00000258909 C12orf45Q8N5I9 185 aaPredicted RBP13.37□□□□□ -0.27
TM6SF1-201ENST00000258909 IGLC2P0DOY2 106 aa13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 S100A10P60903 97 aa13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 C15orf53Q8NAA6 179 aa13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 C2orf50Q96LR7 162 aa13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 DNAJC4Q9NNZ3 241 aa13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 J3KRW8 73 aa13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 NUDT3O95989 172 aa13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 H2AFB2P0C5Z0 115 aa13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 RAB31Q13636 194 aa13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 Q6ZRG5 221 aa13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 C16orf74Q96GX8 76 aa13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 ATG101Q9BSB4 218 aa13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 NOP10Q9NPE3 64 aaKnown RBP13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 UQCC1Q9NVA1 299 aa13.36□□□□□ -0.27
TM6SF1-201ENST00000258909 UBE2L5PA0A1B0GUS4 154 aa13.35□□□□□ -0.27
TM6SF1-201ENST00000258909 ATP5G1P05496 136 aa13.35□□□□□ -0.27
TM6SF1-201ENST00000258909 ATP5G3P48201 142 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms