RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 FCGR2BP31994 310 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 EXOC3-AS1Q8N2X6 119 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 TNFRSF14Q92956 283 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 ABCA2Q9BZC7 2435 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 LINC00173Q6ZV60 143 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 OR1L4Q8NGR5 311 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 C11orf52Q96A22 123 aa11.59□□□□□ -0.55
TRAFD1-201ENST00000257604 IGFL4Q6B9Z1 124 aa11.58□□□□□ -0.56
TRAFD1-201ENST00000257604 C17orf77Q96MU5 243 aa11.58□□□□□ -0.56
TRAFD1-201ENST00000257604 CLUHP3Q96NS8 147 aa11.58□□□□□ -0.56
TRAFD1-201ENST00000257604 SORL1Q92673 2214 aa11.58□□□□□ -0.56
TRAFD1-201ENST00000257604 M0R2Z0 102 aa11.58□□□□□ -0.56
TRAFD1-201ENST00000257604 ISLRO14498 428 aa11.58□□□□□ -0.56
TRAFD1-201ENST00000257604 UBE2G1P62253 170 aa11.58□□□□□ -0.56
TRAFD1-201ENST00000257604 FAM167A-AS1Q96KT0 104 aa11.58□□□□□ -0.56
TRAFD1-201ENST00000257604 ZNF331Q9NQX6 463 aaPredicted RBP11.58□□□□□ -0.56
TRAFD1-201ENST00000257604 ARL2-SNX15V9GYD0 113 aa11.58□□□□□ -0.56
TRAFD1-201ENST00000257604 LINC01548A6NM66 108 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 ZNF207O43670 478 aaKnown RBP11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 AMY1AP04745 511 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 CSN3P07498 182 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 NBEAP1P0C6P0 100 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 HOXB4P17483 251 aaPredicted RBP11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 C5orf64Q2M2E5 130 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 FAM71F2Q6NXP2 309 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 TRAV40A0A0B4J280 105 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 G3V318 75 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 IGLV2-8P01709 118 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 WDR73Q6P4I2 378 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 TCF24Q7RTU0 167 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 SPATA12Q7Z6I5 190 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 DTX2Q86UW9 622 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 LY6G5BQ8NDX9 201 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 C8orf31Q8N9H6 132 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 ARPC1AQ92747 370 aa11.57□□□□□ -0.56
TRAFD1-201ENST00000257604 TRAV9-1A0A075B6T8 112 aa11.56□□□□□ -0.56
TRAFD1-201ENST00000257604 hDV102S1A0JD36 115 aa11.56□□□□□ -0.56
TRAFD1-201ENST00000257604 VAMP3Q15836 100 aa11.56□□□□□ -0.56
TRAFD1-201ENST00000257604 GDF5OSQ5U4N7 250 aa11.56□□□□□ -0.56
TRAFD1-201ENST00000257604 C18orf32Q8TCD1 76 aa11.56□□□□□ -0.56
TRAFD1-201ENST00000257604 HIGD1AQ9Y241 93 aa11.56□□□□□ -0.56
TRAFD1-201ENST00000257604 IGHV4-61A0A0C4DH41 118 aa11.56□□□□□ -0.56
TRAFD1-201ENST00000257604 LY6LH3BQJ8 138 aa11.56□□□□□ -0.56
TRAFD1-201ENST00000257604 TSPOP30536 169 aa11.56□□□□□ -0.56
TRAFD1-201ENST00000257604 Q71RC1 249 aaPredicted RBP11.56□□□□□ -0.56
TRAFD1-201ENST00000257604 WNK1Q9H4A3 2382 aa11.56□□□□□ -0.56
TRAFD1-201ENST00000257604 MUC21A0A0G2JKD1 596 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 MUC21A0A140T8X8 626 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 OR10J3Q5JRS4 329 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 MUC21Q5SSG8 566 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 EBLN2Q6P2I7 272 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 TEX15Q9BXT5 2789 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 TRBV9A0A0B4J1U6 114 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 RIPPLY3P57055 190 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 CFHR4Q92496 578 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 MT-ND6P03923 174 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 CRYGBP07316 175 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 PIP4P2Q8N4L2 257 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 OR11H6Q8NGC7 330 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 OSTCQ9NRP0 149 aa11.55□□□□□ -0.56
TRAFD1-201ENST00000257604 PRRC2AP48634 2157 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-201ENST00000257604 HLA-DQA1P01909 254 aa11.54□□□□□ -0.56
TRAFD1-201ENST00000257604 IGLL1P15814 213 aa11.54□□□□□ -0.56
TRAFD1-201ENST00000257604 RPL19P84098 196 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-201ENST00000257604 IGLC1P0CG04 106 aa11.54□□□□□ -0.56
TRAFD1-201ENST00000257604 MRPL52Q86TS9 123 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-201ENST00000257604 C8orf46Q8TAG6 207 aa11.54□□□□□ -0.56
TRAFD1-201ENST00000257604 M0R1W7 72 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 M0R3E3 92 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 GPR183P32249 361 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 LMO4P61968 165 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 GOLT1AQ6ZVE7 132 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 PRNTQ86SH4 94 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 FXYD5Q96DB9 178 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 BBC3Q96PG8 261 aaPredicted RBP11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 NAA38Q9BRA0 125 aaKnown RBP11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 FASNP49327 2511 aaKnown RBP11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 IGKV1-17P01599 117 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 CCDC144NLQ6NUI1 221 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 LY96Q9Y6Y9 160 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 IGKV3-7A0A075B6H7 116 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 IGHV4-30-2A0A087WSY4 118 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 IGHV2-70DA0A0C4DH43 119 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 K7EIM0 57 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 PEX7O00628 323 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 FAM106CPP0CH98 169 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 LCNL1Q6ZST4 164 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 NUP35Q8NFH5 326 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 OR4C5Q8NGB2 326 aa11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 SLC25A39Q9BZJ4 359 aaPredicted RBP11.53□□□□□ -0.56
TRAFD1-201ENST00000257604 SMIM27A0A1W2PRY6 76 aa11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 MPV17L2Q567V2 206 aa11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 KLHDC1Q8N7A1 406 aa11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 ALKBH7Q9BT30 221 aaPredicted RBP11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 Q9H3A6 140 aa11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 C2CD3Q4AC94 2353 aa11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 PSMB11A5LHX3 300 aa11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 IZUMO1RA6ND01 250 aa11.52□□□□□ -0.57
TRAFD1-201ENST00000257604 FAM181BA6NEQ2 426 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms