RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 ZNF841Q6ZN19 808 aa7.36□□□□□ -1.23
RPA1-201ENST00000254719 OR10J6PQ8NGY7 276 aa7.36□□□□□ -1.23
RPA1-201ENST00000254719 MINOS1-NBL1R4GNA1 71 aa7.36□□□□□ -1.23
RPA1-201ENST00000254719 VWC2LB2RUY7 222 aa7.36□□□□□ -1.23
RPA1-201ENST00000254719 APELAP0DMC3 54 aa7.36□□□□□ -1.23
RPA1-201ENST00000254719 HERVK_113P61574 105 aa7.36□□□□□ -1.23
RPA1-201ENST00000254719 C11orf52Q96A22 123 aa7.36□□□□□ -1.23
RPA1-201ENST00000254719 CHCHD1Q96BP2 118 aaKnown RBP7.36□□□□□ -1.23
RPA1-201ENST00000254719 TPSG1Q9NRR2 321 aa7.36□□□□□ -1.23
RPA1-201ENST00000254719 M0R1W7 72 aa7.36□□□□□ -1.23
RPA1-201ENST00000254719 GRNP28799 593 aaKnown RBP7.36□□□□□ -1.23
RPA1-201ENST00000254719 CX3CL1P78423 397 aa7.36□□□□□ -1.23
RPA1-201ENST00000254719 SLC50A1Q9BRV3 221 aa7.36□□□□□ -1.23
RPA1-201ENST00000254719 MRPL27Q9P0M9 148 aaKnown RBP7.36□□□□□ -1.23
RPA1-201ENST00000254719 SH2D7A6NKC9 451 aaPredicted RBP7.36□□□□□ -1.23
RPA1-201ENST00000254719 ZNF324O75467 553 aaPredicted RBP7.36□□□□□ -1.23
RPA1-201ENST00000254719 PPP1R17O96001 155 aa7.36□□□□□ -1.23
RPA1-201ENST00000254719 SPANXN1Q5VSR9 72 aa7.36□□□□□ -1.23
RPA1-201ENST00000254719 NF1P21359 2839 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 ZNF207O43670 478 aaKnown RBP7.35□□□□□ -1.23
RPA1-201ENST00000254719 ATP5G2Q06055 141 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 OR10W1Q8NGF6 305 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 PIMREGQ9BSJ6 248 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 IGHV2-26A0A0B4J1V2 119 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 HIGD1CA8MV81 97 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 TWIST1Q15672 202 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 ZNF833PQ6ZTB9 187 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 OR5AN1Q8NGI8 311 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 LINC01560Q8TB33 94 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 FAM167A-AS1Q96KT0 104 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 NRN1Q9NPD7 142 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 GATA2P23769 480 aaPredicted RBP7.35□□□□□ -1.23
RPA1-201ENST00000254719 Q0VG73 95 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 TMEM155Q4W5P6 130 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 TPTE2P1Q5T6R2 138 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 RNF125Q96EQ8 232 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 FNDC4Q9H6D8 234 aaPredicted RBP7.35□□□□□ -1.23
RPA1-201ENST00000254719 C7orf69Q9H7B7 122 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 UFC1Q9Y3C8 167 aa7.35□□□□□ -1.23
RPA1-201ENST00000254719 F11RQ9Y624 299 aaKnown RBP7.35□□□□□ -1.23
RPA1-201ENST00000254719 A0A1W2PPR1 153 aa7.34□□□□□ -1.23
RPA1-201ENST00000254719 FAM231BA6NCW3 169 aa7.34□□□□□ -1.23
RPA1-201ENST00000254719 PPBPP02775 128 aa7.34□□□□□ -1.23
RPA1-201ENST00000254719 FCER1GP30273 86 aa7.34□□□□□ -1.23
RPA1-201ENST00000254719 COA6Q5JTJ3 125 aaKnown RBP7.34□□□□□ -1.23
RPA1-201ENST00000254719 PATE2Q6UY27 113 aa7.34□□□□□ -1.23
RPA1-201ENST00000254719 SPACA3Q8IXA5 215 aa7.34□□□□□ -1.23
RPA1-201ENST00000254719 C16orf92Q96LL3 132 aa7.34□□□□□ -1.23
RPA1-201ENST00000254719 NBL1P41271 181 aa7.34□□□□□ -1.23
RPA1-201ENST00000254719 YPEL3P61236 119 aaPredicted RBP7.34□□□□□ -1.23
RPA1-201ENST00000254719 ARL6IP6Q8N6S5 226 aa7.34□□□□□ -1.23
RPA1-201ENST00000254719 ASCL2Q99929 193 aa7.34□□□□□ -1.23
RPA1-201ENST00000254719 RNASE7Q9H1E1 156 aaKnown RBP7.34□□□□□ -1.23
RPA1-201ENST00000254719 CRYGBP07316 175 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 CT83Q5H943 113 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 TMEM136Q6ZRR5 245 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 OR8A1Q8NGG7 326 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 NDUFA4L2Q9NRX3 87 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 KAAG1Q9UBP8 84 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 ABCA4P78363 2273 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 IGHV1-3A0A0C4DH29 117 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 PRB3Q04118 309 aaPredicted RBP7.33□□□□□ -1.24
RPA1-201ENST00000254719 WT1-ASQ06250 92 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 FOXE3Q13461 319 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 ALKBH7Q9BT30 221 aaPredicted RBP7.33□□□□□ -1.24
RPA1-201ENST00000254719 NCOR2Q9Y618 2525 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 NOTCH2Q04721 2471 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 FAM106AQ4KMX7 169 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 FAM231DQ6ZW35 169 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 SIGLEC9Q9Y336 463 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 COL6A6A6NMZ7 2263 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 TMSB15BA0A087X1C1 80 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 A0A0G2JLM5 398 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 ZNF672Q499Z4 452 aaPredicted RBP7.33□□□□□ -1.24
RPA1-201ENST00000254719 GFRA4Q9GZZ7 299 aa7.33□□□□□ -1.24
RPA1-201ENST00000254719 KIR2DL5BA0A0G2JN68 375 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 KIR2DL5BA0A0G2JPC4 375 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 PSG1P11464 419 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 KIR2DL5AQ8N109 375 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 ORMDL3Q8N138 153 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 KIR3DL3Q8N743 410 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 Q8N976 141 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 C17orf77Q96MU5 243 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 ZNF492Q9P255 531 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 PSG8Q9UQ74 426 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 IGHV3-48P01763 117 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 PYYP10082 97 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 PDE6HQ13956 83 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 NUDT10Q8NFP7 164 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 NUDT11Q96G61 164 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 FABP5P3A8MUU1 101 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 C22orf46C9J442 243 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 ATP5LO75964 103 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 MYCNOSP40205 109 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 AJUBAQ96IF1 538 aa7.32□□□□□ -1.24
RPA1-201ENST00000254719 TRAV9-2A0A087WT02 112 aa7.31□□□□□ -1.24
RPA1-201ENST00000254719 GGTLC3B5MD39 225 aa7.31□□□□□ -1.24
RPA1-201ENST00000254719 BUB1B-PAK6H3BSN5 160 aa7.31□□□□□ -1.24
RPA1-201ENST00000254719 SAP30O75446 220 aa7.31□□□□□ -1.24
RPA1-201ENST00000254719 TOMM40O96008 361 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms