RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 PAX4O43316 350 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 DEFB130BP0DP73 79 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 DEFB130AP0DP74 79 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 HOXB4P17483 251 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-201ENST00000254630 DAD1P61803 113 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 MLANAQ16655 118 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 DUX4L9Q6RFH8 374 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-201ENST00000254630 TMEM158Q8WZ71 300 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 TMEM14BQ9NUH8 114 aa7.02□□□□□ -1.29
PTCD3-201ENST00000254630 NDUFB8O95169 186 aa7.01□□□□□ -1.29
PTCD3-201ENST00000254630 NBL1P41271 181 aa7.01□□□□□ -1.29
PTCD3-201ENST00000254630 PDE6HQ13956 83 aa7.01□□□□□ -1.29
PTCD3-201ENST00000254630 SAMD5Q5TGI4 173 aa7.01□□□□□ -1.29
PTCD3-201ENST00000254630 Q71RC1 249 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-201ENST00000254630 MCRIP2Q9BUT9 160 aaKnown RBP7.01□□□□□ -1.29
PTCD3-201ENST00000254630 KLK9Q9UKQ9 250 aa7.01□□□□□ -1.29
PTCD3-201ENST00000254630 ZNF562Q6V9R5 426 aa7.01□□□□□ -1.29
PTCD3-201ENST00000254630 RPP25LQ8N5L8 163 aaKnown RBP7.01□□□□□ -1.29
PTCD3-201ENST00000254630 NDUFA4L2Q9NRX3 87 aa7.01□□□□□ -1.29
PTCD3-201ENST00000254630 WDR86Q86TI4 376 aa7.01□□□□□ -1.29
PTCD3-201ENST00000254630 F8WEM9 126 aa7.01□□□□□ -1.29
PTCD3-201ENST00000254630 AZU1P20160 251 aa7.01□□□□□ -1.29
PTCD3-201ENST00000254630 SEC11AP67812 179 aa7.01□□□□□ -1.29
PTCD3-201ENST00000254630 CR1LQ2VPA4 569 aa7.01□□□□□ -1.29
PTCD3-201ENST00000254630 HIST3H2BBQ8N257 126 aa7.01□□□□□ -1.29
PTCD3-201ENST00000254630 SRSF4Q08170 494 aaKnown RBP7□□□□□ -1.29
PTCD3-201ENST00000254630 Q6ZR03 302 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 PIP4P1Q86T03 277 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 OVOL2Q9BRP0 275 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 ZNF503-AS2A6NEH8 195 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 TIMM21Q9BVV7 248 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 GON4LQ3T8J9 2241 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 TRAV8-1A0A0A6YYK1 113 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 YPEL3P61236 119 aaPredicted RBP7□□□□□ -1.29
PTCD3-201ENST00000254630 C1orf159Q96HA4 380 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 LMO1P25800 156 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 C6orf226Q5I0X4 101 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 HIST1H2BLQ99880 126 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 KIF26AQ9ULI4 1882 aaPredicted RBP7□□□□□ -1.29
PTCD3-201ENST00000254630 MYMXA0A1B0GTQ4 84 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 F5H768 121 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 XCL2Q9UBD3 114 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 ANAPC1Q9H1A4 1944 aa7□□□□□ -1.29
PTCD3-201ENST00000254630 TRBV24-1A0A075B6N3 115 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 TRAV13-1A0A0B4J241 112 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 A8MWV9 139 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 NDUFA4O00483 81 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 H3BRN7 92 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 CFPP27918 469 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 SPINK13Q1W4C9 94 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 ZNF479Q96JC4 524 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 NCOR1P1Q9H4R4 102 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 IGKV1-6A0A0C4DH72 117 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 ETV2O00321 342 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-201ENST00000254630 AMN1Q8IY45 258 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 ZNF492Q9P255 531 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 RALGAPA1Q6GYQ0 2036 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 IGHV3-16A0A0C4DH30 117 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 hDV102S1A0JD36 115 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 G3V318 75 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 IGLV1-44P01699 117 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 LOXP28300 417 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-201ENST00000254630 LAMTOR3Q9UHA4 124 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 C8orf86Q6ZUL3 223 aa6.99□□□□□ -1.29
PTCD3-201ENST00000254630 GAGE12JA6NER3 117 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 GAGE1Q13065 139 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 GAGE4Q13068 117 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 GAGE5Q13069 117 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 GAGE13Q4V321 117 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 PLXND1Q9Y4D7 1925 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 TRBV25-1A0A075B6N4 114 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 PRSS46E5RG02 174 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 I3L3M4 83 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 LGALS1P09382 135 aaKnown RBP6.98□□□□□ -1.29
PTCD3-201ENST00000254630 TNFRSF6BO95407 300 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 PFN1P07737 140 aaKnown RBP6.98□□□□□ -1.29
PTCD3-201ENST00000254630 GUSBP1Q15486 140 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 Q6ZRM9 215 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 TMEM141Q96I45 108 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 KNCNA6PVL3 124 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 MST1LQ2TV78 715 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 ARTNQ5T4W7 220 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 LINC00311Q8N616 119 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 REG4Q9BYZ8 158 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 MRPL27Q9P0M9 148 aaKnown RBP6.98□□□□□ -1.29
PTCD3-201ENST00000254630 COLCA2A8K830 154 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 ARMS2P0C7Q2 107 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 NDUFAF3Q9BU61 184 aa6.98□□□□□ -1.29
PTCD3-201ENST00000254630 CACNA1CQ13936 2221 aa6.97□□□□□ -1.29
PTCD3-201ENST00000254630 SSBP2P81877 361 aaPredicted RBP6.97□□□□□ -1.29
PTCD3-201ENST00000254630 SPXQ9BT56 116 aa6.97□□□□□ -1.29
PTCD3-201ENST00000254630 ANAPC10Q9UM13 185 aa6.97□□□□□ -1.29
PTCD3-201ENST00000254630 INS-IGF2F8WCM5 200 aa6.97□□□□□ -1.29
PTCD3-201ENST00000254630 C1orf194Q5T5A4 169 aa6.97□□□□□ -1.29
PTCD3-201ENST00000254630 LIME1Q9H400 295 aa6.97□□□□□ -1.29
PTCD3-201ENST00000254630 FAM215AQ9Y5M1 114 aa6.97□□□□□ -1.29
PTCD3-201ENST00000254630 IGHV1OR15-1A0A075B7D0 117 aa6.97□□□□□ -1.29
PTCD3-201ENST00000254630 PAX9P55771 341 aa6.97□□□□□ -1.29
PTCD3-201ENST00000254630 TCTEX1D4Q5JR98 221 aa6.97□□□□□ -1.29
PTCD3-201ENST00000254630 THAP8Q8NA92 274 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms