RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 TRAV25A0A0B4J276 109 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 LOC102723971A0A1B0GUV8 181 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 FAM74A7A6NL05 159 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 ZNF207O43670 478 aaKnown RBP9.82□□□□□ -0.84
LSM8-201ENST00000249299 APOHP02749 345 aaPredicted RBP9.82□□□□□ -0.84
LSM8-201ENST00000249299 OR10J4P0C629 311 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 PYYP10082 97 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 PSG9Q00887 426 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 FAM90A2PQ658T7 463 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 C12orf54Q6X4T0 127 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 SIGLEC15Q6ZMC9 328 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 COMMD7Q86VX2 200 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 IQCF2Q8IXL9 164 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 SLC50A1Q9BRV3 221 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 EIF5A2Q9GZV4 153 aaKnown RBP9.82□□□□□ -0.84
LSM8-201ENST00000249299 ZNF586Q9NXT0 402 aa9.82□□□□□ -0.84
LSM8-201ENST00000249299 A0A1B0GV50 99 aa9.81□□□□□ -0.84
LSM8-201ENST00000249299 ZNF785A8K8V0 405 aa9.81□□□□□ -0.84
LSM8-201ENST00000249299 TMEM250H0YL14 139 aa9.81□□□□□ -0.84
LSM8-201ENST00000249299 H3BQ15 152 aa9.81□□□□□ -0.84
LSM8-201ENST00000249299 PAGE4O60829 102 aa9.81□□□□□ -0.84
LSM8-201ENST00000249299 PF4P02776 101 aa9.81□□□□□ -0.84
LSM8-201ENST00000249299 CSN3P07498 182 aa9.81□□□□□ -0.84
LSM8-201ENST00000249299 C3orf56Q8N813 242 aa9.81□□□□□ -0.84
LSM8-201ENST00000249299 OR2K2Q8NGT1 345 aa9.81□□□□□ -0.84
LSM8-201ENST00000249299 RPUSD4Q96CM3 377 aaKnown RBP9.81□□□□□ -0.84
LSM8-201ENST00000249299 NRN1Q9NPD7 142 aa9.81□□□□□ -0.84
LSM8-201ENST00000249299 OTORQ9NRC9 128 aa9.81□□□□□ -0.84
LSM8-201ENST00000249299 PRELID1Q9Y255 219 aa9.81□□□□□ -0.84
LSM8-201ENST00000249299 SMAD5-AS1Q9Y6J3 95 aa9.81□□□□□ -0.84
LSM8-201ENST00000249299 C11orf94C9JXX5 98 aa9.8□□□□□ -0.84
LSM8-201ENST00000249299 F6UZH7 168 aa9.8□□□□□ -0.84
LSM8-201ENST00000249299 EIF3GO75821 320 aaKnown RBP eCLIP9.8□□□□□ -0.84
LSM8-201ENST00000249299 INSL3P51460 131 aa9.8□□□□□ -0.84
LSM8-201ENST00000249299 PAFAH1B2P68402 229 aa9.8□□□□□ -0.84
LSM8-201ENST00000249299 ICAM4Q14773 271 aa9.8□□□□□ -0.84
LSM8-201ENST00000249299 HAGHQ16775 308 aa9.8□□□□□ -0.84
LSM8-201ENST00000249299 TOR2AQ5JU69 321 aa9.8□□□□□ -0.84
LSM8-201ENST00000249299 CCDC28AQ8IWP9 274 aa9.8□□□□□ -0.84
LSM8-201ENST00000249299 LINC00482Q8N8I6 264 aa9.8□□□□□ -0.84
LSM8-201ENST00000249299 MRPL53Q96EL3 112 aaKnown RBP9.8□□□□□ -0.84
LSM8-201ENST00000249299 AAMDCQ9H7C9 122 aa9.8□□□□□ -0.84
LSM8-201ENST00000249299 ZNF331Q9NQX6 463 aaPredicted RBP9.8□□□□□ -0.84
LSM8-201ENST00000249299 MLXQ9UH92 298 aa9.8□□□□□ -0.84
LSM8-201ENST00000249299 SERTM2A0A1B0GWG4 89 aa9.79□□□□□ -0.84
LSM8-201ENST00000249299 NDUFB4O95168 129 aa9.79□□□□□ -0.84
LSM8-201ENST00000249299 CST9LP1Q5W188 147 aa9.79□□□□□ -0.84
LSM8-201ENST00000249299 ADAMTSL5Q6ZMM2 481 aa9.79□□□□□ -0.84
LSM8-201ENST00000249299 TCF24Q7RTU0 167 aa9.79□□□□□ -0.84
LSM8-201ENST00000249299 C5orf17Q8NAS9 161 aa9.79□□□□□ -0.84
LSM8-201ENST00000249299 WFDC9Q8NEX5 89 aa9.79□□□□□ -0.84
LSM8-201ENST00000249299 RXFP4Q8TDU9 374 aa9.79□□□□□ -0.84
LSM8-201ENST00000249299 HIST1H2BAQ96A08 127 aa9.79□□□□□ -0.84
LSM8-201ENST00000249299 C11orf52Q96A22 123 aa9.79□□□□□ -0.84
LSM8-201ENST00000249299 DUX3Q96PT4 197 aa9.79□□□□□ -0.84
LSM8-201ENST00000249299 MCRIP2Q9BUT9 160 aaKnown RBP9.79□□□□□ -0.84
LSM8-201ENST00000249299 SLC35B3Q9H1N7 401 aa9.79□□□□□ -0.84
LSM8-201ENST00000249299 YTHDF2Q9Y5A9 579 aaKnown RBP9.79□□□□□ -0.84
LSM8-201ENST00000249299 FBN1P35555 2871 aaKnown RBP9.78□□□□□ -0.84
LSM8-201ENST00000249299 IGHV3-49A0A0A0MS15 119 aa9.78□□□□□ -0.84
LSM8-201ENST00000249299 GGTLC3B5MD39 225 aa9.78□□□□□ -0.84
LSM8-201ENST00000249299 ISLRO14498 428 aa9.78□□□□□ -0.84
LSM8-201ENST00000249299 TSPAN4O14817 238 aa9.78□□□□□ -0.84
LSM8-201ENST00000249299 CD81P60033 236 aa9.78□□□□□ -0.84
LSM8-201ENST00000249299 RANP62826 216 aaKnown RBP9.78□□□□□ -0.84
LSM8-201ENST00000249299 SUMO1P63165 101 aaKnown RBP9.78□□□□□ -0.84
LSM8-201ENST00000249299 DEFB114Q30KQ6 69 aa9.78□□□□□ -0.84
LSM8-201ENST00000249299 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.78□□□□□ -0.84
LSM8-201ENST00000249299 DYNLRB2Q8TF09 96 aa9.78□□□□□ -0.84
LSM8-201ENST00000249299 BLNKQ8WV28 456 aa9.78□□□□□ -0.84
LSM8-201ENST00000249299 C17orf77Q96MU5 243 aa9.78□□□□□ -0.84
LSM8-201ENST00000249299 RARRES2Q99969 163 aa9.78□□□□□ -0.84
LSM8-201ENST00000249299 Q9H3A6 140 aa9.78□□□□□ -0.84
LSM8-201ENST00000249299 IGHV3OR16-13A0A075B7E8 117 aa9.77□□□□□ -0.85
LSM8-201ENST00000249299 IGHV3-74A0A0B4J1X5 117 aa9.77□□□□□ -0.85
LSM8-201ENST00000249299 IGHV3-66A0A0C4DH42 116 aa9.77□□□□□ -0.85
LSM8-201ENST00000249299 PGPA6NDG6 321 aa9.77□□□□□ -0.85
LSM8-201ENST00000249299 FBLL1A6NHQ2 334 aaKnown RBP9.77□□□□□ -0.85
LSM8-201ENST00000249299 S100A9P06702 114 aaKnown RBP9.77□□□□□ -0.85
LSM8-201ENST00000249299 ID1P41134 155 aa9.77□□□□□ -0.85
LSM8-201ENST00000249299 UBE2G2P60604 165 aa9.77□□□□□ -0.85
LSM8-201ENST00000249299 LURAP1LQ8IV03 231 aa9.77□□□□□ -0.85
LSM8-201ENST00000249299 TREM1Q9NP99 234 aa9.77□□□□□ -0.85
LSM8-201ENST00000249299 TENM1Q9UKZ4 2725 aa9.77□□□□□ -0.85
LSM8-201ENST00000249299 TMEM218A2RU14 115 aa9.76□□□□□ -0.85
LSM8-201ENST00000249299 KRBOX1C9JBD0 128 aa9.76□□□□□ -0.85
LSM8-201ENST00000249299 SOCS3O14543 225 aa9.76□□□□□ -0.85
LSM8-201ENST00000249299 EREGO14944 169 aa9.76□□□□□ -0.85
LSM8-201ENST00000249299 SRP19P09132 144 aaKnown RBP9.76□□□□□ -0.85
LSM8-201ENST00000249299 CSN1S1P47710 185 aa9.76□□□□□ -0.85
LSM8-201ENST00000249299 RIPPLY3P57055 190 aa9.76□□□□□ -0.85
LSM8-201ENST00000249299 RPL11P62913 178 aaKnown RBP9.76□□□□□ -0.85
LSM8-201ENST00000249299 FAM74A3Q4VXF1 159 aa9.76□□□□□ -0.85
LSM8-201ENST00000249299 RBPMS2Q6ZRY4 209 aaKnown RBP9.76□□□□□ -0.85
LSM8-201ENST00000249299 CMTM2Q8TAZ6 248 aa9.76□□□□□ -0.85
LSM8-201ENST00000249299 DCANP1Q8TF63 244 aa9.76□□□□□ -0.85
LSM8-201ENST00000249299 SPAG8Q99932 426 aaPredicted RBP9.76□□□□□ -0.85
LSM8-201ENST00000249299 EPDR1Q9UM22 224 aa9.76□□□□□ -0.85
LSM8-201ENST00000249299 K7EQM0 130 aa9.75□□□□□ -0.85
LSM8-201ENST00000249299 IGLV1-51P01701 117 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms