RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 LINC00205P59089 165 aa12.74□□□□□ -0.37
SIN3B-201ENST00000248054 SCRT1Q9BWW7 348 aa12.74□□□□□ -0.37
SIN3B-201ENST00000248054 ESPL1Q14674 2120 aa12.74□□□□□ -0.37
SIN3B-201ENST00000248054 A0A1B0GWB2 263 aa12.74□□□□□ -0.37
SIN3B-201ENST00000248054 ZNF562Q6V9R5 426 aa12.73□□□□□ -0.37
SIN3B-201ENST00000248054 SSBP4Q9BWG4 385 aaPredicted RBP12.73□□□□□ -0.37
SIN3B-201ENST00000248054 PAX8Q06710 450 aa12.73□□□□□ -0.37
SIN3B-201ENST00000248054 C1orf122Q6ZSJ8 110 aa12.73□□□□□ -0.37
SIN3B-201ENST00000248054 SEPSECSQ9HD40 501 aaKnown RBP12.73□□□□□ -0.37
SIN3B-201ENST00000248054 KIAA2026Q5HYC2 2103 aa12.73□□□□□ -0.37
SIN3B-201ENST00000248054 IGHV2-70DA0A0C4DH43 119 aa12.73□□□□□ -0.37
SIN3B-201ENST00000248054 SLC25A39Q9BZJ4 359 aaPredicted RBP12.73□□□□□ -0.37
SIN3B-201ENST00000248054 OVOL1O14753 267 aa12.73□□□□□ -0.37
SIN3B-201ENST00000248054 Q0VG73 95 aa12.73□□□□□ -0.37
SIN3B-201ENST00000248054 SMAD7O15105 426 aaKnown RBP12.72□□□□□ -0.37
SIN3B-201ENST00000248054 DNAL4O96015 105 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 LINC01356Q8N9X3 169 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 TMEM101Q96IK0 257 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 USMG5Q96IX5 58 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 DOCK7Q96N67 2140 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 A0A087X0K7 114 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 hDV102S1A0JD36 115 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 DUSP14O95147 198 aaKnown RBP12.72□□□□□ -0.37
SIN3B-201ENST00000248054 TOMM40O96008 361 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 FAM223BA6NKX1 122 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 FAM223AQ8IWN6 122 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 IFI27L1Q96BM0 104 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 CYYR1Q96J86 154 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 GUSBP1Q15486 140 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 C15orf32Q32M92 178 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 SEM1Q6ZVN7 128 aa12.72□□□□□ -0.37
SIN3B-201ENST00000248054 A0A1W2PPI3 338 aa12.71□□□□□ -0.37
SIN3B-201ENST00000248054 CA1P00915 261 aaPredicted RBP12.71□□□□□ -0.37
SIN3B-201ENST00000248054 TCRAP04437 139 aa12.71□□□□□ -0.37
SIN3B-201ENST00000248054 IGHV3OR16-13A0A075B7E8 117 aa12.71□□□□□ -0.37
SIN3B-201ENST00000248054 IGHV3-74A0A0B4J1X5 117 aa12.71□□□□□ -0.37
SIN3B-201ENST00000248054 K7EP13 123 aa12.71□□□□□ -0.37
SIN3B-201ENST00000248054 SCGB1A1P11684 91 aa12.71□□□□□ -0.37
SIN3B-201ENST00000248054 CYSLTR1Q9Y271 337 aa12.71□□□□□ -0.37
SIN3B-201ENST00000248054 CKS1BP61024 79 aa12.71□□□□□ -0.38
SIN3B-201ENST00000248054 SPATA31B1PQ5VZV4 182 aa12.71□□□□□ -0.38
SIN3B-201ENST00000248054 GFRA4Q9GZZ7 299 aa12.71□□□□□ -0.38
SIN3B-201ENST00000248054 IGKCP01834 107 aa12.7□□□□□ -0.38
SIN3B-201ENST00000248054 SAA4P35542 130 aa12.7□□□□□ -0.38
SIN3B-201ENST00000248054 RPL15P61313 204 aaKnown RBP12.7□□□□□ -0.38
SIN3B-201ENST00000248054 DUX4L9Q6RFH8 374 aaPredicted RBP12.7□□□□□ -0.38
SIN3B-201ENST00000248054 LY6HO94772 140 aa12.7□□□□□ -0.38
SIN3B-201ENST00000248054 YPEL3P61236 119 aaPredicted RBP12.7□□□□□ -0.38
SIN3B-201ENST00000248054 SUMO2P61956 95 aaKnown RBP12.7□□□□□ -0.38
SIN3B-201ENST00000248054 PRSS47A8MTI9 375 aa12.7□□□□□ -0.38
SIN3B-201ENST00000248054 ZNF134P52741 427 aa12.7□□□□□ -0.38
SIN3B-201ENST00000248054 FBXL19-AS1Q494R0 122 aa12.7□□□□□ -0.38
SIN3B-201ENST00000248054 TRAV5A0A0B4J249 113 aa12.69□□□□□ -0.38
SIN3B-201ENST00000248054 DNAH12Q6ZR08 3092 aa12.69□□□□□ -0.38
SIN3B-201ENST00000248054 CD5LO43866 347 aa12.69□□□□□ -0.38
SIN3B-201ENST00000248054 YAE1D1Q9NRH1 226 aa12.69□□□□□ -0.38
SIN3B-201ENST00000248054 IGHV3-49A0A0A0MS15 119 aa12.69□□□□□ -0.38
SIN3B-201ENST00000248054 IGHV3-11P01762 117 aa12.69□□□□□ -0.38
SIN3B-201ENST00000248054 MSMBP08118 114 aa12.69□□□□□ -0.38
SIN3B-201ENST00000248054 MRAP2Q96G30 205 aa12.69□□□□□ -0.38
SIN3B-201ENST00000248054 ROS1P08922 2347 aa12.68□□□□□ -0.38
SIN3B-201ENST00000248054 IGHV3-66A0A0C4DH42 116 aa12.68□□□□□ -0.38
SIN3B-201ENST00000248054 FAM231BA6NCW3 169 aa12.68□□□□□ -0.38
SIN3B-201ENST00000248054 H3BUX3 64 aa12.68□□□□□ -0.38
SIN3B-201ENST00000248054 IFI27P40305 119 aaPredicted RBP12.68□□□□□ -0.38
SIN3B-201ENST00000248054 FAM110DQ8TAY7 271 aaPredicted RBP12.68□□□□□ -0.38
SIN3B-201ENST00000248054 CENPFP49454 3210 aa12.68□□□□□ -0.38
SIN3B-201ENST00000248054 MMP23AO75900 390 aa12.68□□□□□ -0.38
SIN3B-201ENST00000248054 DIDO1Q9BTC0 2240 aaKnown RBP12.68□□□□□ -0.38
SIN3B-201ENST00000248054 COL6A6A6NMZ7 2263 aa12.67□□□□□ -0.38
SIN3B-201ENST00000248054 TMEM262E9PQX1 116 aa12.67□□□□□ -0.38
SIN3B-201ENST00000248054 IGLL1P15814 213 aa12.67□□□□□ -0.38
SIN3B-201ENST00000248054 PDE6HQ13956 83 aa12.67□□□□□ -0.38
SIN3B-201ENST00000248054 RNASE4P34096 147 aaKnown RBP12.67□□□□□ -0.38
SIN3B-201ENST00000248054 ZNF318Q5VUA4 2279 aa12.67□□□□□ -0.38
SIN3B-201ENST00000248054 NDUFA3O95167 84 aa12.67□□□□□ -0.38
SIN3B-201ENST00000248054 SIGLEC15Q6ZMC9 328 aa12.67□□□□□ -0.38
SIN3B-201ENST00000248054 IGHV1-69DA0A0B4J2H0 117 aa12.66□□□□□ -0.38
SIN3B-201ENST00000248054 IGHV1-69P01742 117 aa12.66□□□□□ -0.38
SIN3B-201ENST00000248054 PRR31Q5SQ13 230 aa12.66□□□□□ -0.38
SIN3B-201ENST00000248054 SP5Q6BEB4 398 aaPredicted RBP12.66□□□□□ -0.38
SIN3B-201ENST00000248054 TRGV11A0A075B6L2 103 aa12.66□□□□□ -0.38
SIN3B-201ENST00000248054 CT83Q5H943 113 aa12.66□□□□□ -0.38
SIN3B-201ENST00000248054 J3QLI3 93 aa12.66□□□□□ -0.38
SIN3B-201ENST00000248054 ZNF114Q8NC26 417 aa12.66□□□□□ -0.38
SIN3B-201ENST00000248054 NUP35Q8NFH5 326 aa12.66□□□□□ -0.38
SIN3B-201ENST00000248054 CHTOPQ9Y3Y2 248 aaKnown RBP12.66□□□□□ -0.38
SIN3B-201ENST00000248054 IGLC7A0M8Q6 106 aa12.66□□□□□ -0.38
SIN3B-201ENST00000248054 EMP1P54849 157 aa12.66□□□□□ -0.38
SIN3B-201ENST00000248054 PMS2P5A8MQ11 134 aa12.65□□□□□ -0.38
SIN3B-201ENST00000248054 LAGE3Q14657 143 aa12.65□□□□□ -0.38
SIN3B-201ENST00000248054 C9orf139Q6ZV77 190 aa12.65□□□□□ -0.38
SIN3B-201ENST00000248054 ZNF492Q9P255 531 aa12.65□□□□□ -0.38
SIN3B-201ENST00000248054 GTF3C1Q12789 2109 aa12.65□□□□□ -0.38
SIN3B-201ENST00000248054 HAX1O00165 279 aa12.65□□□□□ -0.38
SIN3B-201ENST00000248054 HOXA3O43365 443 aaPredicted RBP12.65□□□□□ -0.38
SIN3B-201ENST00000248054 NDUFB8O95169 186 aa12.65□□□□□ -0.38
SIN3B-201ENST00000248054 SHANK2-AS3Q9BTD1 123 aa12.65□□□□□ -0.38
SIN3B-201ENST00000248054 NHP2Q9NX24 153 aaKnown RBP12.65□□□□□ -0.38
SIN3B-201ENST00000248054 ZNRD1Q9P1U0 126 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms