RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 SCGB1D1O95968 90 aa13.23□□□□□ -0.29
CDKN1A-201ENST00000244741 IQCJQ1A5X6 159 aa13.23□□□□□ -0.29
CDKN1A-201ENST00000244741 MRPL54Q6P161 138 aaKnown RBP13.23□□□□□ -0.29
CDKN1A-201ENST00000244741 REC114Q7Z4M0 266 aa13.23□□□□□ -0.29
CDKN1A-201ENST00000244741 STXBP6Q8NFX7 210 aa13.23□□□□□ -0.29
CDKN1A-201ENST00000244741 PGPA6NDG6 321 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 FAM181BA6NEQ2 426 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 A8MWP6 167 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 CORTO00230 105 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 HLA-DRB1P01911 266 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 NBEAP1P0C6P0 100 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 ESDP10768 282 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 Q0VG73 95 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 SCGB2A2Q13296 93 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 LEMD1Q68G75 181 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 WDR73Q6P4I2 378 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 ZNF562Q6V9R5 426 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 BAGE3Q86Y29 109 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 ZNF418Q8TF45 676 aaPredicted RBP13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 ARPC1AQ92747 370 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 EPDR1Q9UM22 224 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 SLC25A5P05141 298 aaKnown RBP13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 CD33P20138 364 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 RPL19P84098 196 aaKnown RBP13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 KIAA1644Q3SXP7 199 aa13.22□□□□□ -0.29
CDKN1A-201ENST00000244741 H3BTX0 84 aa13.21□□□□□ -0.29
CDKN1A-201ENST00000244741 ATP6V0E1O15342 81 aa13.21□□□□□ -0.29
CDKN1A-201ENST00000244741 MT-ND6P03923 174 aa13.21□□□□□ -0.29
CDKN1A-201ENST00000244741 GP9P14770 177 aa13.21□□□□□ -0.29
CDKN1A-201ENST00000244741 TMEM183BQ1AE95 376 aa13.21□□□□□ -0.29
CDKN1A-201ENST00000244741 FAM231DQ6ZW35 169 aa13.21□□□□□ -0.29
CDKN1A-201ENST00000244741 NUDT10Q8NFP7 164 aa13.21□□□□□ -0.29
CDKN1A-201ENST00000244741 NUDT11Q96G61 164 aa13.21□□□□□ -0.29
CDKN1A-201ENST00000244741 SGK494Q96LW2 274 aa13.21□□□□□ -0.29
CDKN1A-201ENST00000244741 NOL4LQ96MY1 436 aaPredicted RBP13.21□□□□□ -0.29
CDKN1A-201ENST00000244741 GNB4Q9HAV0 340 aa13.21□□□□□ -0.29
CDKN1A-201ENST00000244741 IZUMO1RA6ND01 250 aa13.21□□□□□ -0.3
CDKN1A-201ENST00000244741 G3V318 75 aa13.21□□□□□ -0.3
CDKN1A-201ENST00000244741 I3L2K1 104 aa13.21□□□□□ -0.3
CDKN1A-201ENST00000244741 EGR2P11161 476 aaPredicted RBP13.21□□□□□ -0.3
CDKN1A-201ENST00000244741 TPPP2P59282 170 aa13.21□□□□□ -0.3
CDKN1A-201ENST00000244741 PLP1P60201 277 aa13.21□□□□□ -0.3
CDKN1A-201ENST00000244741 PAFAH1B2P68402 229 aa13.21□□□□□ -0.3
CDKN1A-201ENST00000244741 ECSCRQ19T08 205 aa13.21□□□□□ -0.3
CDKN1A-201ENST00000244741 Q6ZWC4 215 aa13.21□□□□□ -0.3
CDKN1A-201ENST00000244741 WNT10AQ9GZT5 417 aa13.21□□□□□ -0.3
CDKN1A-201ENST00000244741 IGLC1P0CG04 106 aa13.2□□□□□ -0.3
CDKN1A-201ENST00000244741 PSG1P11464 419 aa13.2□□□□□ -0.3
CDKN1A-201ENST00000244741 NAGKQ9UJ70 344 aa13.2□□□□□ -0.3
CDKN1A-201ENST00000244741 PRR27Q6MZM9 219 aa13.2□□□□□ -0.3
CDKN1A-201ENST00000244741 RPH3ALQ9UNE2 315 aa13.2□□□□□ -0.3
CDKN1A-201ENST00000244741 KLF12Q9Y4X4 402 aa13.2□□□□□ -0.3
CDKN1A-201ENST00000244741 M0QZK8 103 aa13.19□□□□□ -0.3
CDKN1A-201ENST00000244741 HILS1P60008 231 aa13.19□□□□□ -0.3
CDKN1A-201ENST00000244741 COX19Q49B96 90 aa13.19□□□□□ -0.3
CDKN1A-201ENST00000244741 GRAMD2BQ96HH9 432 aa13.19□□□□□ -0.3
CDKN1A-201ENST00000244741 HIGD1AQ9Y241 93 aa13.19□□□□□ -0.3
CDKN1A-201ENST00000244741 C2CD3Q4AC94 2353 aa13.19□□□□□ -0.3
CDKN1A-201ENST00000244741 BMPR1BO00238 502 aa13.18□□□□□ -0.3
CDKN1A-201ENST00000244741 LYZP61626 148 aa13.18□□□□□ -0.3
CDKN1A-201ENST00000244741 UBE2G1P62253 170 aa13.18□□□□□ -0.3
CDKN1A-201ENST00000244741 TMEM86BQ8N661 226 aa13.18□□□□□ -0.3
CDKN1A-201ENST00000244741 HLA-DQA1P01909 254 aa13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 UNQ5815/PRO19632Q6UWF5 114 aa13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 ZNF600Q6ZNG1 722 aa13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 NUP35Q8NFH5 326 aa13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 NPFFR1Q9GZQ6 430 aa13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 Q9H3A6 140 aa13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 ZNF331Q9NQX6 463 aaPredicted RBP13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 K7EIM0 57 aa13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 IGKV1-17P01599 117 aa13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 IGHG2P01859 326 aa13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 GPR82Q96P67 336 aa13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 SRSF8Q9BRL6 282 aaKnown RBP13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 ATG101Q9BSB4 218 aa13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 ZNF702PQ9H963 129 aa13.17□□□□□ -0.3
CDKN1A-201ENST00000244741 APCSP02743 223 aa13.16□□□□□ -0.3
CDKN1A-201ENST00000244741 SRIP30626 198 aa13.16□□□□□ -0.3
CDKN1A-201ENST00000244741 USF2Q15853 346 aaPredicted RBP13.16□□□□□ -0.3
CDKN1A-201ENST00000244741 OR10J3Q5JRS4 329 aa13.16□□□□□ -0.3
CDKN1A-201ENST00000244741 GDF5OSQ5U4N7 250 aa13.16□□□□□ -0.3
CDKN1A-201ENST00000244741 C5orf17Q8NAS9 161 aa13.16□□□□□ -0.3
CDKN1A-201ENST00000244741 MLST8Q9BVC4 326 aa13.16□□□□□ -0.3
CDKN1A-201ENST00000244741 SAMD10Q9BYL1 202 aa13.16□□□□□ -0.3
CDKN1A-201ENST00000244741 SLC25A39Q9BZJ4 359 aaPredicted RBP13.16□□□□□ -0.3
CDKN1A-201ENST00000244741 ZNF705FA8MVS1 300 aaPredicted RBP13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 ZNF705DP0CH99 300 aaPredicted RBP13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 ZNF705BP0CI00 300 aaPredicted RBP13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 SLAQ13239 276 aa13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 LINC00322Q6ZN03 302 aaPredicted RBP13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 RCHY1Q96PM5 261 aa13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 NDUFAF3Q9BU61 184 aa13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 PRSS22Q9GZN4 317 aa13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 ZNF586Q9NXT0 402 aa13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 TCF21O43680 179 aa13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 TOMM40O96008 361 aa13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 TCRAP04437 139 aa13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 RNASE1P07998 156 aaKnown RBP13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 HIST1H1EP10412 219 aaKnown RBP13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 C10orf99Q6UWK7 81 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms