RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 LYZP61626 148 aa9.98□□□□□ -0.81
HIF3A-201ENST00000244302 ATP5G2Q06055 141 aa9.98□□□□□ -0.81
HIF3A-201ENST00000244302 KLK9Q2XQG4 91 aa9.98□□□□□ -0.81
HIF3A-201ENST00000244302 TMEM68Q96MH6 324 aa9.98□□□□□ -0.81
HIF3A-201ENST00000244302 DERL1Q9BUN8 251 aa9.98□□□□□ -0.81
HIF3A-201ENST00000244302 IL36BQ9NZH7 164 aa9.98□□□□□ -0.81
HIF3A-201ENST00000244302 KLK9Q9UKQ9 250 aa9.98□□□□□ -0.81
HIF3A-201ENST00000244302 A0A1B0GV90 55 aa9.98□□□□□ -0.81
HIF3A-201ENST00000244302 SCO2A0A1W2PP80 73 aa9.98□□□□□ -0.81
HIF3A-201ENST00000244302 PRB4P10163 310 aaPredicted RBP9.98□□□□□ -0.81
HIF3A-201ENST00000244302 RPL19P84098 196 aaKnown RBP9.98□□□□□ -0.81
HIF3A-201ENST00000244302 TEX29Q8N6K0 151 aa9.98□□□□□ -0.81
HIF3A-201ENST00000244302 ZNF503Q96F45 646 aa9.98□□□□□ -0.81
HIF3A-201ENST00000244302 SELENOKQ9Y6D0 94 aa9.98□□□□□ -0.81
HIF3A-201ENST00000244302 TRBV20OR9-2A0A075B6H5 130 aa9.97□□□□□ -0.81
HIF3A-201ENST00000244302 ESDP10768 282 aa9.97□□□□□ -0.81
HIF3A-201ENST00000244302 PSMB8P28062 276 aa9.97□□□□□ -0.81
HIF3A-201ENST00000244302 PAFAH1B2P68402 229 aa9.97□□□□□ -0.81
HIF3A-201ENST00000244302 USF2Q15853 346 aaPredicted RBP9.97□□□□□ -0.81
HIF3A-201ENST00000244302 ZNF491Q8N8L2 437 aa9.97□□□□□ -0.81
HIF3A-201ENST00000244302 GNB4Q9HAV0 340 aa9.97□□□□□ -0.81
HIF3A-201ENST00000244302 DNAJC4Q9NNZ3 241 aa9.97□□□□□ -0.81
HIF3A-201ENST00000244302 ZNF207O43670 478 aaKnown RBP9.97□□□□□ -0.81
HIF3A-201ENST00000244302 IGHG4P01861 327 aa9.97□□□□□ -0.81
HIF3A-201ENST00000244302 IL4P05112 153 aa9.97□□□□□ -0.81
HIF3A-201ENST00000244302 TCTEX1D4Q5JR98 221 aa9.97□□□□□ -0.81
HIF3A-201ENST00000244302 MRPL52Q86TS9 123 aaKnown RBP9.97□□□□□ -0.81
HIF3A-201ENST00000244302 TMEM86BQ8N661 226 aa9.97□□□□□ -0.81
HIF3A-201ENST00000244302 VN1R17PQ8TDU5 208 aa9.97□□□□□ -0.81
HIF3A-201ENST00000244302 TMEM167BQ9NRX6 74 aa9.97□□□□□ -0.81
HIF3A-201ENST00000244302 YTHDF2Q9Y5A9 579 aaKnown RBP9.97□□□□□ -0.81
HIF3A-201ENST00000244302 WNK1Q9H4A3 2382 aa9.96□□□□□ -0.81
HIF3A-201ENST00000244302 ATRQ13535 2644 aa9.96□□□□□ -0.81
HIF3A-201ENST00000244302 IGHV3OR16-13A0A075B7E8 117 aa9.96□□□□□ -0.82
HIF3A-201ENST00000244302 IGHV3-74A0A0B4J1X5 117 aa9.96□□□□□ -0.82
HIF3A-201ENST00000244302 KIR2DL5BA0A0G2JN68 375 aa9.96□□□□□ -0.82
HIF3A-201ENST00000244302 KIR2DL5BA0A0G2JPC4 375 aa9.96□□□□□ -0.82
HIF3A-201ENST00000244302 OR10J4P0C629 311 aa9.96□□□□□ -0.82
HIF3A-201ENST00000244302 HILS1P60008 231 aa9.96□□□□□ -0.82
HIF3A-201ENST00000244302 COX19Q49B96 90 aa9.96□□□□□ -0.82
HIF3A-201ENST00000244302 C1orf194Q5T5A4 169 aa9.96□□□□□ -0.82
HIF3A-201ENST00000244302 LINC00305Q7Z4B0 112 aa9.96□□□□□ -0.82
HIF3A-201ENST00000244302 KIR2DL5AQ8N109 375 aa9.96□□□□□ -0.82
HIF3A-201ENST00000244302 Q8N2B8 174 aa9.96□□□□□ -0.82
HIF3A-201ENST00000244302 OCC1Q8TAD7 63 aa9.96□□□□□ -0.82
HIF3A-201ENST00000244302 NAGKQ9UJ70 344 aa9.96□□□□□ -0.82
HIF3A-201ENST00000244302 IGHV3-49A0A0A0MS15 119 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 H3BTX0 84 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 PYYP10082 97 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 FOSL1P15407 271 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 ERVFC1-1P60608 527 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 OR4X2Q8NGF9 303 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 CMTM2Q8TAZ6 248 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 FAM167A-AS1Q96KT0 104 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 C19orf24Q9BVV8 132 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 AURKAIP1Q9NWT8 199 aaPredicted RBP9.95□□□□□ -0.82
HIF3A-201ENST00000244302 COX7A2P2O60397 106 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 EDN2P20800 178 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 RANP62826 216 aaKnown RBP9.95□□□□□ -0.82
HIF3A-201ENST00000244302 C10orf113Q5VZT2 155 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 ZNF418Q8TF45 676 aaPredicted RBP9.95□□□□□ -0.82
HIF3A-201ENST00000244302 EEF1AKMT3Q96AZ1 226 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 SLC25A2Q9BXI2 301 aa9.95□□□□□ -0.82
HIF3A-201ENST00000244302 TRRAPQ9Y4A5 3859 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 IGHV3-66A0A0C4DH42 116 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 HAX1O00165 279 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 SCGB1D1O95968 90 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 TOMM40O96008 361 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 APOHP02749 345 aaPredicted RBP9.94□□□□□ -0.82
HIF3A-201ENST00000244302 RNASE1P07998 156 aaKnown RBP9.94□□□□□ -0.82
HIF3A-201ENST00000244302 RPEL1Q2QD12 228 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 TOMM20LQ6UXN7 152 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 UNQ9165/PRO28630Q6UXU0 137 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 KLHDC1Q8N7A1 406 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 FBN1P35555 2871 aaKnown RBP9.94□□□□□ -0.82
HIF3A-201ENST00000244302 PGPEP1LA6NFU8 196 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 HYPMO75409 117 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 MT-ND6P03923 174 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 DEFB136Q30KP8 78 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 LINC01006Q8NI28 216 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 RNF125Q96EQ8 232 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 DUX3Q96PT4 197 aa9.94□□□□□ -0.82
HIF3A-201ENST00000244302 MRPL27Q9P0M9 148 aaKnown RBP9.94□□□□□ -0.82
HIF3A-201ENST00000244302 WI2-2373I1.2A0A1W2PRP0 233 aa9.93□□□□□ -0.82
HIF3A-201ENST00000244302 FAM223BA6NKX1 122 aa9.93□□□□□ -0.82
HIF3A-201ENST00000244302 CRLF1O75462 422 aa9.93□□□□□ -0.82
HIF3A-201ENST00000244302 CRISP2P16562 243 aa9.93□□□□□ -0.82
HIF3A-201ENST00000244302 FCGR2BP31994 310 aaPredicted RBP9.93□□□□□ -0.82
HIF3A-201ENST00000244302 Q0VG73 95 aa9.93□□□□□ -0.82
HIF3A-201ENST00000244302 PQLC2Q6ZP29 291 aa9.93□□□□□ -0.82
HIF3A-201ENST00000244302 FAM223AQ8IWN6 122 aa9.93□□□□□ -0.82
HIF3A-201ENST00000244302 TMEM256Q8N2U0 113 aa9.93□□□□□ -0.82
HIF3A-201ENST00000244302 OR5AU1Q8NGC0 362 aa9.93□□□□□ -0.82
HIF3A-201ENST00000244302 MRPL18Q9H0U6 180 aaKnown RBP9.93□□□□□ -0.82
HIF3A-201ENST00000244302 TECRQ9NZ01 308 aaKnown RBP9.93□□□□□ -0.82
HIF3A-201ENST00000244302 TRBV7-1A0A0A6YYK4 115 aa9.92□□□□□ -0.82
HIF3A-201ENST00000244302 CLPSL1A2RUU4 121 aa9.92□□□□□ -0.82
HIF3A-201ENST00000244302 K7EN84 100 aa9.92□□□□□ -0.82
HIF3A-201ENST00000244302 BMPR1BO00238 502 aa9.92□□□□□ -0.82
HIF3A-201ENST00000244302 TAS2R45P59539 299 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms