RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PFDN5Q99471 154 aa10.03□□□□□ -0.8
DDX39A-201ENST00000242776 RHPN1-AS1Q9BWJ2 59 aa10.03□□□□□ -0.8
DDX39A-201ENST00000242776 SMPXQ9UHP9 88 aa10.03□□□□□ -0.8
DDX39A-201ENST00000242776 RABAC1Q9UI14 185 aa10.03□□□□□ -0.8
DDX39A-201ENST00000242776 K7EMT4 169 aa10.02□□□□□ -0.81
DDX39A-201ENST00000242776 CHEK1O14757 476 aa10.02□□□□□ -0.81
DDX39A-201ENST00000242776 RTL8CO15255 209 aa10.02□□□□□ -0.81
DDX39A-201ENST00000242776 COX7A2P2O60397 106 aa10.02□□□□□ -0.81
DDX39A-201ENST00000242776 RBMY1A1P0DJD3 496 aaKnown RBP10.02□□□□□ -0.81
DDX39A-201ENST00000242776 RBMY1CP0DJD4 496 aa10.02□□□□□ -0.81
DDX39A-201ENST00000242776 ORM2P19652 201 aa10.02□□□□□ -0.81
DDX39A-201ENST00000242776 SERF2P84101 59 aa10.02□□□□□ -0.81
DDX39A-201ENST00000242776 RBMY1FQ15415 496 aaKnown RBP10.02□□□□□ -0.81
DDX39A-201ENST00000242776 FFAR4Q5NUL3 377 aa10.02□□□□□ -0.81
DDX39A-201ENST00000242776 EIF5AL1Q6IS14 154 aaKnown RBP10.02□□□□□ -0.81
DDX39A-201ENST00000242776 OR1B1Q8NGR6 318 aa10.02□□□□□ -0.81
DDX39A-201ENST00000242776 ARV1Q9H2C2 271 aa10.02□□□□□ -0.81
DDX39A-201ENST00000242776 RNF24Q9Y225 148 aa10.02□□□□□ -0.81
DDX39A-201ENST00000242776 PKD1P98161 4303 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 DNAH11Q96DT5 4516 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 ELOA3CA0A087WX78 387 aaPredicted RBP10.01□□□□□ -0.81
DDX39A-201ENST00000242776 IGHV4-28A0A0C4DH34 117 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 IGHV7-4-1A0A0J9YVY3 117 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 C11orf94C9JXX5 98 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 HYPMO75409 117 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 MBP02144 154 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 NPPCP23582 126 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 ACOT6Q3I5F7 207 aaPredicted RBP10.01□□□□□ -0.81
DDX39A-201ENST00000242776 TMEM182Q6ZP80 229 aaPredicted RBP10.01□□□□□ -0.81
DDX39A-201ENST00000242776 ZNF575Q86XF7 245 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 OR2G3Q8NGZ4 309 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 ST8SIA2Q92186 375 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 SLC25A32Q9H2D1 315 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 TMEM231Q9H6L2 316 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 HIGD1AQ9Y241 93 aa10.01□□□□□ -0.81
DDX39A-201ENST00000242776 IGHV3-66A0A0C4DH42 116 aa10□□□□□ -0.81
DDX39A-201ENST00000242776 A0A1W2PS18 150 aa10□□□□□ -0.81
DDX39A-201ENST00000242776 OR5G3P0C626 314 aa10□□□□□ -0.81
DDX39A-201ENST00000242776 SEC11BP0C7V7 166 aa10□□□□□ -0.81
DDX39A-201ENST00000242776 SPP1P10451 314 aa10□□□□□ -0.81
DDX39A-201ENST00000242776 DEFB131AP59861 70 aa10□□□□□ -0.81
DDX39A-201ENST00000242776 USF2Q15853 346 aaPredicted RBP10□□□□□ -0.81
DDX39A-201ENST00000242776 C10orf113Q5VZT2 155 aa10□□□□□ -0.81
DDX39A-201ENST00000242776 Q8NAQ8 132 aa10□□□□□ -0.81
DDX39A-201ENST00000242776 ZNF414Q96IQ9 312 aa10□□□□□ -0.81
DDX39A-201ENST00000242776 SH3BGRL3Q9H299 93 aa10□□□□□ -0.81
DDX39A-201ENST00000242776 DOK5Q9P104 306 aa10□□□□□ -0.81
DDX39A-201ENST00000242776 TRAV10A0A0B4J240 114 aa9.99□□□□□ -0.81
DDX39A-201ENST00000242776 M6PRP20645 277 aa9.99□□□□□ -0.81
DDX39A-201ENST00000242776 CMC4P56277 68 aaPredicted RBP9.99□□□□□ -0.81
DDX39A-201ENST00000242776 RPL11P62913 178 aaKnown RBP9.99□□□□□ -0.81
DDX39A-201ENST00000242776 AKR1C8PQ5T2L2 129 aa9.99□□□□□ -0.81
DDX39A-201ENST00000242776 TCF24Q7RTU0 167 aa9.99□□□□□ -0.81
DDX39A-201ENST00000242776 FAM24BQ8N5W8 94 aa9.99□□□□□ -0.81
DDX39A-201ENST00000242776 GRAMD2BQ96HH9 432 aa9.99□□□□□ -0.81
DDX39A-201ENST00000242776 SCRT1Q9BWW7 348 aa9.99□□□□□ -0.81
DDX39A-201ENST00000242776 DNAJC4Q9NNZ3 241 aa9.99□□□□□ -0.81
DDX39A-201ENST00000242776 BOLA1Q9Y3E2 137 aa9.99□□□□□ -0.81
DDX39A-201ENST00000242776 IGLV2-18A0A075B6J9 118 aa9.98□□□□□ -0.81
DDX39A-201ENST00000242776 DNASE2O00115 360 aaPredicted RBP9.98□□□□□ -0.81
DDX39A-201ENST00000242776 CRYBB3P26998 211 aa9.98□□□□□ -0.81
DDX39A-201ENST00000242776 PHYHIPLQ96FC7 376 aa9.98□□□□□ -0.81
DDX39A-201ENST00000242776 MRPL32Q9BYC8 188 aaKnown RBP9.98□□□□□ -0.81
DDX39A-201ENST00000242776 CLEC5AQ9NY25 188 aa9.98□□□□□ -0.81
DDX39A-201ENST00000242776 PLA2G2EQ9NZK7 142 aa9.98□□□□□ -0.81
DDX39A-201ENST00000242776 UMAD1C9J7I0 102 aa9.98□□□□□ -0.81
DDX39A-201ENST00000242776 H3BRN7 92 aa9.98□□□□□ -0.81
DDX39A-201ENST00000242776 RHOBP62745 196 aa9.98□□□□□ -0.81
DDX39A-201ENST00000242776 TMEM41BQ5BJD5 291 aa9.98□□□□□ -0.81
DDX39A-201ENST00000242776 LINC00305Q7Z4B0 112 aa9.98□□□□□ -0.81
DDX39A-201ENST00000242776 STHQ8IWL8 128 aa9.98□□□□□ -0.81
DDX39A-201ENST00000242776 CELA1Q9UNI1 258 aa9.98□□□□□ -0.81
DDX39A-201ENST00000242776 A0A1W2PPV4 95 aa9.97□□□□□ -0.81
DDX39A-201ENST00000242776 APOHP02749 345 aaPredicted RBP9.97□□□□□ -0.81
DDX39A-201ENST00000242776 PAFAH1B2P68402 229 aa9.97□□□□□ -0.81
DDX39A-201ENST00000242776 FAM78BQ5VT40 261 aa9.97□□□□□ -0.81
DDX39A-201ENST00000242776 FAM90A2PQ658T7 463 aa9.97□□□□□ -0.81
DDX39A-201ENST00000242776 POM121L12Q8N7R1 296 aa9.97□□□□□ -0.81
DDX39A-201ENST00000242776 OR10G4Q8NGN3 311 aa9.97□□□□□ -0.81
DDX39A-201ENST00000242776 OR10G9Q8NGN4 311 aa9.97□□□□□ -0.81
DDX39A-201ENST00000242776 OR10G7Q8NGN6 311 aa9.97□□□□□ -0.81
DDX39A-201ENST00000242776 TMED6Q8WW62 240 aa9.97□□□□□ -0.81
DDX39A-201ENST00000242776 TMEM37Q8WXS4 190 aa9.97□□□□□ -0.81
DDX39A-201ENST00000242776 SLC25A39Q9BZJ4 359 aaPredicted RBP9.97□□□□□ -0.81
DDX39A-201ENST00000242776 MS4A6AQ9H2W1 248 aa9.97□□□□□ -0.81
DDX39A-201ENST00000242776 RFNGQ9Y644 331 aa9.97□□□□□ -0.81
DDX39A-201ENST00000242776 DEFB131BA0A096LNP1 70 aa9.96□□□□□ -0.82
DDX39A-201ENST00000242776 CD5P06127 495 aa9.96□□□□□ -0.82
DDX39A-201ENST00000242776 RAB2AP61019 212 aa9.96□□□□□ -0.82
DDX39A-201ENST00000242776 GCSAMLQ5JQS6 135 aa9.96□□□□□ -0.82
DDX39A-201ENST00000242776 C1orf194Q5T5A4 169 aa9.96□□□□□ -0.82
DDX39A-201ENST00000242776 PATE2Q6UY27 113 aa9.96□□□□□ -0.82
DDX39A-201ENST00000242776 GPR82Q96P67 336 aa9.96□□□□□ -0.82
DDX39A-201ENST00000242776 UHRF2Q96PU4 802 aa9.96□□□□□ -0.82
DDX39A-201ENST00000242776 SHANK2-AS3Q9BTD1 123 aa9.96□□□□□ -0.82
DDX39A-201ENST00000242776 HRH4Q9H3N8 390 aa9.96□□□□□ -0.82
DDX39A-201ENST00000242776 FUT9Q9Y231 359 aa9.96□□□□□ -0.82
DDX39A-201ENST00000242776 U3KQE9 123 aa9.96□□□□□ -0.82
DDX39A-201ENST00000242776 ZNF98A6NK75 572 aa9.95□□□□□ -0.82
DDX39A-201ENST00000242776 KNCNA6PVL3 124 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms