RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 NDUFB4O95168 129 aa10.55□□□□□ -0.72
SEC61B-201ENST00000223641 OR10J4P0C629 311 aa10.55□□□□□ -0.72
SEC61B-201ENST00000223641 UBE2L3P68036 154 aaKnown RBP10.55□□□□□ -0.72
SEC61B-201ENST00000223641 PRR31Q5SQ13 230 aa10.55□□□□□ -0.72
SEC61B-201ENST00000223641 DCANP1Q8TF63 244 aa10.55□□□□□ -0.72
SEC61B-201ENST00000223641 NRN1Q9NPD7 142 aa10.55□□□□□ -0.72
SEC61B-201ENST00000223641 ZNF785A8K8V0 405 aa10.54□□□□□ -0.72
SEC61B-201ENST00000223641 ATF4P18848 351 aaPredicted RBP10.54□□□□□ -0.72
SEC61B-201ENST00000223641 PCNPQ8WW12 178 aaKnown RBP10.54□□□□□ -0.72
SEC61B-201ENST00000223641 MS4A6AQ9H2W1 248 aa10.54□□□□□ -0.72
SEC61B-201ENST00000223641 SELENOKQ9Y6D0 94 aa10.54□□□□□ -0.72
SEC61B-201ENST00000223641 ARL2-SNX15V9GYD0 113 aa10.54□□□□□ -0.72
SEC61B-201ENST00000223641 IZUMO1RA6ND01 250 aa10.53□□□□□ -0.72
SEC61B-201ENST00000223641 K7EQG2 157 aa10.53□□□□□ -0.72
SEC61B-201ENST00000223641 SNRPCP09234 159 aaKnown RBP10.53□□□□□ -0.72
SEC61B-201ENST00000223641 IGLL1P15814 213 aa10.53□□□□□ -0.72
SEC61B-201ENST00000223641 RAB14P61106 215 aa10.53□□□□□ -0.72
SEC61B-201ENST00000223641 RBPMS2Q6ZRY4 209 aaKnown RBP10.53□□□□□ -0.72
SEC61B-201ENST00000223641 LYPD1Q8N2G4 141 aa10.53□□□□□ -0.72
SEC61B-201ENST00000223641 SPAG8Q99932 426 aaPredicted RBP10.53□□□□□ -0.72
SEC61B-201ENST00000223641 ZNF331Q9NQX6 463 aaPredicted RBP10.53□□□□□ -0.72
SEC61B-201ENST00000223641 ZNF256Q9Y2P7 627 aaPredicted RBP10.53□□□□□ -0.72
SEC61B-201ENST00000223641 TRAV8-2A0A0B4J237 113 aa10.52□□□□□ -0.73
SEC61B-201ENST00000223641 A0A1B0GV50 99 aa10.52□□□□□ -0.73
SEC61B-201ENST00000223641 A0A1W2PRE2 83 aa10.52□□□□□ -0.73
SEC61B-201ENST00000223641 SLC17A3O00476 420 aa10.52□□□□□ -0.73
SEC61B-201ENST00000223641 PPT1P50897 306 aa10.52□□□□□ -0.73
SEC61B-201ENST00000223641 RPL11P62913 178 aaKnown RBP10.52□□□□□ -0.73
SEC61B-201ENST00000223641 PAFAH1B2P68402 229 aa10.52□□□□□ -0.73
SEC61B-201ENST00000223641 SAMD13Q5VXD3 122 aa10.52□□□□□ -0.73
SEC61B-201ENST00000223641 BLNKQ8WV28 456 aa10.52□□□□□ -0.73
SEC61B-201ENST00000223641 SLC50A1Q9BRV3 221 aa10.52□□□□□ -0.73
SEC61B-201ENST00000223641 GPR61Q9BZJ8 451 aa10.52□□□□□ -0.73
SEC61B-201ENST00000223641 IGKV3-7A0A075B6H7 116 aa10.51□□□□□ -0.73
SEC61B-201ENST00000223641 FAM74A7A6NL05 159 aa10.51□□□□□ -0.73
SEC61B-201ENST00000223641 H3BTX0 84 aa10.51□□□□□ -0.73
SEC61B-201ENST00000223641 ISLRO14498 428 aa10.51□□□□□ -0.73
SEC61B-201ENST00000223641 BEAN1Q3B7T3 259 aa10.51□□□□□ -0.73
SEC61B-201ENST00000223641 LCN12Q6JVE5 192 aa10.51□□□□□ -0.73
SEC61B-201ENST00000223641 GBGT1Q8N5D6 347 aa10.51□□□□□ -0.73
SEC61B-201ENST00000223641 MANBALQ9NQG1 85 aa10.51□□□□□ -0.73
SEC61B-201ENST00000223641 CLEC5AQ9NY25 188 aa10.51□□□□□ -0.73
SEC61B-201ENST00000223641 RANP62826 216 aaKnown RBP10.5□□□□□ -0.73
SEC61B-201ENST00000223641 PSG9Q00887 426 aa10.5□□□□□ -0.73
SEC61B-201ENST00000223641 CCDC28AQ8IWP9 274 aa10.5□□□□□ -0.73
SEC61B-201ENST00000223641 IQCF2Q8IXL9 164 aa10.5□□□□□ -0.73
SEC61B-201ENST00000223641 NKX6-2Q9C056 277 aaPredicted RBP10.5□□□□□ -0.73
SEC61B-201ENST00000223641 MED9Q9NWA0 146 aa10.5□□□□□ -0.73
SEC61B-201ENST00000223641 YTHDF2Q9Y5A9 579 aaKnown RBP10.5□□□□□ -0.73
SEC61B-201ENST00000223641 OR4C46A6NHA9 309 aa10.49□□□□□ -0.73
SEC61B-201ENST00000223641 GGTLC3B5MD39 225 aa10.49□□□□□ -0.73
SEC61B-201ENST00000223641 DNASE2O00115 360 aaPredicted RBP10.49□□□□□ -0.73
SEC61B-201ENST00000223641 PAGE4O60829 102 aa10.49□□□□□ -0.73
SEC61B-201ENST00000223641 TAGLN2P37802 199 aaKnown RBP10.49□□□□□ -0.73
SEC61B-201ENST00000223641 EXOC3-AS1Q8N2X6 119 aa10.49□□□□□ -0.73
SEC61B-201ENST00000223641 FAM24BQ8N5W8 94 aa10.49□□□□□ -0.73
SEC61B-201ENST00000223641 ARL6IP6Q8N6S5 226 aa10.49□□□□□ -0.73
SEC61B-201ENST00000223641 C16orf92Q96LL3 132 aa10.49□□□□□ -0.73
SEC61B-201ENST00000223641 FAM210AQ96ND0 272 aa10.49□□□□□ -0.73
SEC61B-201ENST00000223641 TXNDC17Q9BRA2 123 aa10.49□□□□□ -0.73
SEC61B-201ENST00000223641 Q9H3A6 140 aa10.49□□□□□ -0.73
SEC61B-201ENST00000223641 OTORQ9NRC9 128 aa10.49□□□□□ -0.73
SEC61B-201ENST00000223641 GNG13Q9P2W3 67 aa10.49□□□□□ -0.73
SEC61B-201ENST00000223641 PGPA6NDG6 321 aa10.48□□□□□ -0.73
SEC61B-201ENST00000223641 TFPI2P48307 235 aa10.48□□□□□ -0.73
SEC61B-201ENST00000223641 UBE2G2P60604 165 aa10.48□□□□□ -0.73
SEC61B-201ENST00000223641 SUMO1P63165 101 aaKnown RBP10.48□□□□□ -0.73
SEC61B-201ENST00000223641 EGFEM1PQ0D2K5 195 aa10.48□□□□□ -0.73
SEC61B-201ENST00000223641 ICAM4Q14773 271 aa10.48□□□□□ -0.73
SEC61B-201ENST00000223641 OXLD1Q5BKU9 147 aa10.48□□□□□ -0.73
SEC61B-201ENST00000223641 WFDC3Q8IUB2 231 aa10.48□□□□□ -0.73
SEC61B-201ENST00000223641 MRPL53Q96EL3 112 aaKnown RBP10.48□□□□□ -0.73
SEC61B-201ENST00000223641 FAM110AQ9BQ89 295 aa10.48□□□□□ -0.73
SEC61B-201ENST00000223641 PRELID1Q9Y255 219 aa10.48□□□□□ -0.73
SEC61B-201ENST00000223641 NOTCH3Q9UM47 2321 aa10.48□□□□□ -0.73
SEC61B-201ENST00000223641 LOC102723971A0A1B0GUV8 181 aa10.47□□□□□ -0.73
SEC61B-201ENST00000223641 RBFOX3A6NFN3 312 aa10.47□□□□□ -0.73
SEC61B-201ENST00000223641 NDUFS6O75380 124 aaKnown RBP10.47□□□□□ -0.73
SEC61B-201ENST00000223641 IFNA1P01562 189 aa10.47□□□□□ -0.73
SEC61B-201ENST00000223641 BCL2P10415 239 aa10.47□□□□□ -0.73
SEC61B-201ENST00000223641 HLA-DMBP28068 263 aa10.47□□□□□ -0.73
SEC61B-201ENST00000223641 ID1P41134 155 aa10.47□□□□□ -0.73
SEC61B-201ENST00000223641 PSG3Q16557 428 aa10.47□□□□□ -0.73
SEC61B-201ENST00000223641 GUCA2BQ16661 112 aa10.47□□□□□ -0.73
SEC61B-201ENST00000223641 SAMD5Q5TGI4 173 aa10.47□□□□□ -0.73
SEC61B-201ENST00000223641 IGFL4Q6B9Z1 124 aa10.47□□□□□ -0.73
SEC61B-201ENST00000223641 C20orf173Q96LM9 149 aa10.47□□□□□ -0.73
SEC61B-201ENST00000223641 AAMDCQ9H7C9 122 aa10.47□□□□□ -0.73
SEC61B-201ENST00000223641 VAX2Q9UIW0 290 aa10.47□□□□□ -0.73
SEC61B-201ENST00000223641 DNHD1Q96M86 4753 aa10.46□□□□□ -0.73
SEC61B-201ENST00000223641 LINC00862A6NCI5 91 aa10.46□□□□□ -0.73
SEC61B-201ENST00000223641 M0R3E3 92 aa10.46□□□□□ -0.73
SEC61B-201ENST00000223641 ATP5G3P48201 142 aa10.46□□□□□ -0.73
SEC61B-201ENST00000223641 CD81P60033 236 aa10.46□□□□□ -0.73
SEC61B-201ENST00000223641 SNRPD3P62318 126 aaKnown RBP10.46□□□□□ -0.73
SEC61B-201ENST00000223641 MEF2BQ02080 365 aaPredicted RBP10.46□□□□□ -0.73
SEC61B-201ENST00000223641 HAGHQ16775 308 aa10.46□□□□□ -0.73
SEC61B-201ENST00000223641 ODF3L2Q3SX64 289 aa10.46□□□□□ -0.73
SEC61B-201ENST00000223641 ZNF506Q5JVG8 444 aa10.46□□□□□ -0.73
SEC61B-201ENST00000223641 RNF182Q8N6D2 247 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms