RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 NKX6-2Q9C056 277 aaPredicted RBP10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 SH3BGRL3Q9H299 93 aa10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 SLC39A9Q9NUM3 307 aa10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 PXMP4Q9Y6I8 212 aa10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 LOC102724200A0A096LPH7 203 aaPredicted RBP10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 F8W036 122 aa10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 ADCYAP1P18509 176 aa10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 GALR1P47211 349 aa10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 RPL29P47914 159 aaKnown RBP10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 B2MP61769 119 aa10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 S100A7AQ86SG5 101 aa10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 OR2G3Q8NGZ4 309 aa10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 RSG1Q9BU20 258 aa10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 SMDT1Q9H4I9 107 aa10.89□□□□□ -0.67
PCOLCE-201ENST00000223061 COL7A1Q02388 2944 aa10.88□□□□□ -0.67
PCOLCE-201ENST00000223061 IFNA5P01569 189 aa10.88□□□□□ -0.67
PCOLCE-201ENST00000223061 RPL35AP18077 110 aaKnown RBP10.88□□□□□ -0.67
PCOLCE-201ENST00000223061 PSMG4Q5JS54 123 aa10.88□□□□□ -0.67
PCOLCE-201ENST00000223061 C10orf113Q5VZT2 155 aa10.88□□□□□ -0.67
PCOLCE-201ENST00000223061 LINC00305Q7Z4B0 112 aa10.88□□□□□ -0.67
PCOLCE-201ENST00000223061 TMEM37Q8WXS4 190 aa10.88□□□□□ -0.67
PCOLCE-201ENST00000223061 WDR61Q9GZS3 305 aaKnown RBP10.88□□□□□ -0.67
PCOLCE-201ENST00000223061 ELOA3CA0A087WX78 387 aaPredicted RBP10.87□□□□□ -0.67
PCOLCE-201ENST00000223061 SNRPD3P62318 126 aaKnown RBP10.87□□□□□ -0.67
PCOLCE-201ENST00000223061 PEA15Q15121 130 aa10.87□□□□□ -0.67
PCOLCE-201ENST00000223061 ATRAIDQ6UW56 229 aa10.87□□□□□ -0.67
PCOLCE-201ENST00000223061 ZNF709Q8N972 641 aa10.87□□□□□ -0.67
PCOLCE-201ENST00000223061 GPR82Q96P67 336 aa10.87□□□□□ -0.67
PCOLCE-201ENST00000223061 DNAJC4Q9NNZ3 241 aa10.87□□□□□ -0.67
PCOLCE-201ENST00000223061 SNAPINO95295 136 aa10.87□□□□□ -0.67
PCOLCE-201ENST00000223061 OR1L4Q8NGR5 311 aa10.87□□□□□ -0.67
PCOLCE-201ENST00000223061 SCGB1C1Q8TD33 95 aa10.87□□□□□ -0.67
PCOLCE-201ENST00000223061 PSMG3Q9BT73 122 aaPredicted RBP10.87□□□□□ -0.67
PCOLCE-201ENST00000223061 ZMAT4Q9H898 229 aa10.87□□□□□ -0.67
PCOLCE-201ENST00000223061 KNCNA6PVL3 124 aa10.86□□□□□ -0.67
PCOLCE-201ENST00000223061 SFTA3P0C7M3 94 aa10.86□□□□□ -0.67
PCOLCE-201ENST00000223061 RPL7P18124 248 aaKnown RBP10.86□□□□□ -0.67
PCOLCE-201ENST00000223061 ATF4P18848 351 aaPredicted RBP10.86□□□□□ -0.67
PCOLCE-201ENST00000223061 MORN5Q5VZ52 161 aa10.86□□□□□ -0.67
PCOLCE-201ENST00000223061 FAM213BQ8TBF2 198 aa10.86□□□□□ -0.67
PCOLCE-201ENST00000223061 PFDN5Q99471 154 aa10.86□□□□□ -0.67
PCOLCE-201ENST00000223061 TM2D3Q9BRN9 247 aa10.86□□□□□ -0.67
PCOLCE-201ENST00000223061 U3KQK5 164 aa10.86□□□□□ -0.67
PCOLCE-201ENST00000223061 ID1P41134 155 aa10.85□□□□□ -0.67
PCOLCE-201ENST00000223061 FHITP49789 147 aa10.85□□□□□ -0.67
PCOLCE-201ENST00000223061 GUK1Q16774 197 aa10.85□□□□□ -0.67
PCOLCE-201ENST00000223061 GCSAMLQ5JQS6 135 aa10.85□□□□□ -0.67
PCOLCE-201ENST00000223061 ACTL10Q5JWF8 245 aa10.85□□□□□ -0.67
PCOLCE-201ENST00000223061 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.85□□□□□ -0.67
PCOLCE-201ENST00000223061 C17orf77Q96MU5 243 aa10.85□□□□□ -0.67
PCOLCE-201ENST00000223061 RETNQ9HD89 108 aa10.85□□□□□ -0.67
PCOLCE-201ENST00000223061 KCNIP2Q9NS61 270 aa10.85□□□□□ -0.67
PCOLCE-201ENST00000223061 TRAV5A0A0B4J249 113 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 C17orf112F2Z3M2 114 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 SOCS3O14543 225 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 APOC4P55056 127 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 AKR1C8PQ5T2L2 129 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 C16orf92Q96LL3 132 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 RCHY1Q96PM5 261 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 SPATA25Q9BR10 227 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 RNF24Q9Y225 148 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 HUWE1Q7Z6Z7 4374 aaKnown RBP10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 HBE1P02100 147 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 SNRPCP09234 159 aaKnown RBP10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 PSMB3P49720 205 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 MEOX2P50222 304 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 SERF2P84101 59 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 STHQ8IWL8 128 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 SEPSECSQ9HD40 501 aaKnown RBP10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 TIMM9Q9Y5J7 89 aa10.84□□□□□ -0.67
PCOLCE-201ENST00000223061 TRAV1-1A0A0B4J248 108 aa10.83□□□□□ -0.68
PCOLCE-201ENST00000223061 ISLRO14498 428 aa10.83□□□□□ -0.68
PCOLCE-201ENST00000223061 H2AFB1P0C5Y9 115 aa10.83□□□□□ -0.68
PCOLCE-201ENST00000223061 DEFB1P60022 68 aa10.83□□□□□ -0.68
PCOLCE-201ENST00000223061 RAB2AP61019 212 aa10.83□□□□□ -0.68
PCOLCE-201ENST00000223061 SAMD13Q5VXD3 122 aa10.83□□□□□ -0.68
PCOLCE-201ENST00000223061 IGFL4Q6B9Z1 124 aa10.83□□□□□ -0.68
PCOLCE-201ENST00000223061 GATAD1Q8WUU5 269 aa10.83□□□□□ -0.68
PCOLCE-201ENST00000223061 C9JQL5 133 aa10.82□□□□□ -0.68
PCOLCE-201ENST00000223061 FFAR4Q5NUL3 377 aa10.82□□□□□ -0.68
PCOLCE-201ENST00000223061 BPIFA4PQ86YQ2 179 aa10.82□□□□□ -0.68
PCOLCE-201ENST00000223061 RFNGQ9Y644 331 aa10.82□□□□□ -0.68
PCOLCE-201ENST00000223061 NBEAL2Q6ZNJ1 2754 aa10.82□□□□□ -0.68
PCOLCE-201ENST00000223061 KIR2DL5BA0A0G2JN68 375 aa10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 KIR2DL5BA0A0G2JPC4 375 aa10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 H3BTX0 84 aa10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 MRPS12O15235 138 aaKnown RBP10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 FAM78BQ5VT40 261 aa10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 SPATA31B1PQ5VZV4 182 aa10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 KIR2DL5AQ8N109 375 aa10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 KIR2DL5BQ8NHK3 375 aa10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 C20orf173Q96LM9 149 aa10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 EIF5A2Q9GZV4 153 aaKnown RBP10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 A0A087X0K7 114 aa10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 TRAV8-2A0A0B4J237 113 aa10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 FAM74A7A6NL05 159 aa10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 FAM74A3Q4VXF1 159 aa10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 TRPT1Q86TN4 253 aaKnown RBP10.81□□□□□ -0.68
PCOLCE-201ENST00000223061 RNF182Q8N6D2 247 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms