RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 GCSAMLQ5JQS6 135 aa10.15□□□□□ -0.78
UPK1A-201ENST00000222275 SLC51BQ86UW2 128 aa10.15□□□□□ -0.78
UPK1A-201ENST00000222275 C16orf92Q96LL3 132 aa10.15□□□□□ -0.78
UPK1A-201ENST00000222275 SLC50A1Q9BRV3 221 aa10.15□□□□□ -0.78
UPK1A-201ENST00000222275 ACTR3CQ9C0K3 210 aaPredicted RBP10.15□□□□□ -0.78
UPK1A-201ENST00000222275 HRH4Q9H3N8 390 aa10.15□□□□□ -0.78
UPK1A-201ENST00000222275 TUBA4BQ9H853 241 aa10.15□□□□□ -0.78
UPK1A-201ENST00000222275 ZNF253O75346 499 aa10.14□□□□□ -0.79
UPK1A-201ENST00000222275 HIST1H1EP10412 219 aaKnown RBP10.14□□□□□ -0.79
UPK1A-201ENST00000222275 CDC34P49427 236 aaPredicted RBP10.14□□□□□ -0.79
UPK1A-201ENST00000222275 CD300CQ08708 224 aa10.14□□□□□ -0.79
UPK1A-201ENST00000222275 PDE6HQ13956 83 aa10.14□□□□□ -0.79
UPK1A-201ENST00000222275 PQLC2Q6ZP29 291 aa10.14□□□□□ -0.79
UPK1A-201ENST00000222275 MIR17HGQ75NE6 70 aa10.14□□□□□ -0.79
UPK1A-201ENST00000222275 C9orf62Q8N4C0 152 aa10.14□□□□□ -0.79
UPK1A-201ENST00000222275 SH3BGRL3Q9H299 93 aa10.14□□□□□ -0.79
UPK1A-201ENST00000222275 OR51M1Q9H341 326 aa10.14□□□□□ -0.79
UPK1A-201ENST00000222275 TRAV5A0A0B4J249 113 aa10.13□□□□□ -0.79
UPK1A-201ENST00000222275 MRPS12O15235 138 aaKnown RBP10.13□□□□□ -0.79
UPK1A-201ENST00000222275 OR7C2O60412 319 aa10.13□□□□□ -0.79
UPK1A-201ENST00000222275 IGLC2P0DOY2 106 aa10.13□□□□□ -0.79
UPK1A-201ENST00000222275 RAB2AP61019 212 aa10.13□□□□□ -0.79
UPK1A-201ENST00000222275 PSG9Q00887 426 aa10.13□□□□□ -0.79
UPK1A-201ENST00000222275 ODF3L2Q3SX64 289 aa10.13□□□□□ -0.79
UPK1A-201ENST00000222275 MORN5Q5VZ52 161 aa10.13□□□□□ -0.79
UPK1A-201ENST00000222275 FAM122CQ6P4D5 195 aa10.13□□□□□ -0.79
UPK1A-201ENST00000222275 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.13□□□□□ -0.79
UPK1A-201ENST00000222275 RCHY1Q96PM5 261 aa10.13□□□□□ -0.79
UPK1A-201ENST00000222275 PAXXQ9BUH6 204 aa10.13□□□□□ -0.79
UPK1A-201ENST00000222275 SLC25A2Q9BXI2 301 aa10.13□□□□□ -0.79
UPK1A-201ENST00000222275 MAP6D1Q9H9H5 199 aa10.13□□□□□ -0.79
UPK1A-201ENST00000222275 SOCS3O14543 225 aa10.12□□□□□ -0.79
UPK1A-201ENST00000222275 ZNF688P0C7X2 276 aa10.12□□□□□ -0.79
UPK1A-201ENST00000222275 RAB5CP51148 216 aa10.12□□□□□ -0.79
UPK1A-201ENST00000222275 DEFB131AP59861 70 aa10.12□□□□□ -0.79
UPK1A-201ENST00000222275 SPATA31B1PQ5VZV4 182 aa10.12□□□□□ -0.79
UPK1A-201ENST00000222275 DPPA3Q6W0C5 159 aa10.12□□□□□ -0.79
UPK1A-201ENST00000222275 FAM167A-AS1Q96KT0 104 aa10.12□□□□□ -0.79
UPK1A-201ENST00000222275 TM2D3Q9BRN9 247 aa10.12□□□□□ -0.79
UPK1A-201ENST00000222275 RPRMQ9NS64 109 aa10.12□□□□□ -0.79
UPK1A-201ENST00000222275 UBQLN2Q9UHD9 624 aa10.12□□□□□ -0.79
UPK1A-201ENST00000222275 CTXND1A0A1B0GTU2 59 aa10.11□□□□□ -0.79
UPK1A-201ENST00000222275 PSMG4Q5JS54 123 aa10.11□□□□□ -0.79
UPK1A-201ENST00000222275 RPP25LQ8N5L8 163 aaKnown RBP10.11□□□□□ -0.79
UPK1A-201ENST00000222275 DEFB125Q8N687 156 aa10.11□□□□□ -0.79
UPK1A-201ENST00000222275 RNF141Q8WVD5 230 aa10.11□□□□□ -0.79
UPK1A-201ENST00000222275 RAB24Q969Q5 203 aa10.11□□□□□ -0.79
UPK1A-201ENST00000222275 LINC00052Q96N35 136 aa10.11□□□□□ -0.79
UPK1A-201ENST00000222275 WFDC10AQ9H1F0 79 aa10.11□□□□□ -0.79
UPK1A-201ENST00000222275 SRD5A3Q9H8P0 318 aa10.11□□□□□ -0.79
UPK1A-201ENST00000222275 RFNGQ9Y644 331 aa10.11□□□□□ -0.79
UPK1A-201ENST00000222275 HYDINQ4G0P3 5121 aa10.11□□□□□ -0.79
UPK1A-201ENST00000222275 TRBV19A0A075B6N1 114 aa10.1□□□□□ -0.79
UPK1A-201ENST00000222275 CXorf1O96002 111 aa10.1□□□□□ -0.79
UPK1A-201ENST00000222275 NBEAP1P0C6P0 100 aa10.1□□□□□ -0.79
UPK1A-201ENST00000222275 STAG3L2P0CL84 134 aa10.1□□□□□ -0.79
UPK1A-201ENST00000222275 STAG3L3P0CL85 134 aa10.1□□□□□ -0.79
UPK1A-201ENST00000222275 UBE2L3P68036 154 aaKnown RBP10.1□□□□□ -0.79
UPK1A-201ENST00000222275 HAGHQ16775 308 aa10.1□□□□□ -0.79
UPK1A-201ENST00000222275 EBLN2Q6P2I7 272 aa10.1□□□□□ -0.79
UPK1A-201ENST00000222275 LINC00322Q6ZN03 302 aaPredicted RBP10.1□□□□□ -0.79
UPK1A-201ENST00000222275 LYPD1Q8N2G4 141 aa10.1□□□□□ -0.79
UPK1A-201ENST00000222275 AAMDCQ9H7C9 122 aa10.1□□□□□ -0.79
UPK1A-201ENST00000222275 ZNF331Q9NQX6 463 aaPredicted RBP10.1□□□□□ -0.79
UPK1A-201ENST00000222275 PRELID1Q9Y255 219 aa10.1□□□□□ -0.79
UPK1A-201ENST00000222275 LOC102724200A0A096LPH7 203 aaPredicted RBP10.09□□□□□ -0.79
UPK1A-201ENST00000222275 H3BQ15 152 aa10.09□□□□□ -0.79
UPK1A-201ENST00000222275 PYYP10082 97 aa10.09□□□□□ -0.79
UPK1A-201ENST00000222275 PSG3Q16557 428 aa10.09□□□□□ -0.79
UPK1A-201ENST00000222275 FAM74A1Q5RGS3 127 aa10.09□□□□□ -0.79
UPK1A-201ENST00000222275 FOXI2Q6ZQN5 318 aa10.09□□□□□ -0.79
UPK1A-201ENST00000222275 STHQ8IWL8 128 aa10.09□□□□□ -0.79
UPK1A-201ENST00000222275 FAM24BQ8N5W8 94 aa10.09□□□□□ -0.79
UPK1A-201ENST00000222275 FXYD5Q96DB9 178 aa10.09□□□□□ -0.79
UPK1A-201ENST00000222275 SAT2Q96F10 170 aaPredicted RBP10.09□□□□□ -0.79
UPK1A-201ENST00000222275 PHYHIPLQ96FC7 376 aa10.09□□□□□ -0.79
UPK1A-201ENST00000222275 TMEM167BQ9NRX6 74 aa10.09□□□□□ -0.79
UPK1A-201ENST00000222275 ZNF586Q9NXT0 402 aa10.09□□□□□ -0.79
UPK1A-201ENST00000222275 RBMY1BA6NDE4 496 aaKnown RBP10.08□□□□□ -0.8
UPK1A-201ENST00000222275 RBMY1EA6NEQ0 496 aaKnown RBP10.08□□□□□ -0.8
UPK1A-201ENST00000222275 RBMY1DP0C7P1 496 aaKnown RBP10.08□□□□□ -0.8
UPK1A-201ENST00000222275 APOC4P55056 127 aa10.08□□□□□ -0.8
UPK1A-201ENST00000222275 APRG1Q8IVJ8 170 aa10.08□□□□□ -0.8
UPK1A-201ENST00000222275 TMED6Q8WW62 240 aa10.08□□□□□ -0.8
UPK1A-201ENST00000222275 MRPL53Q96EL3 112 aaKnown RBP10.08□□□□□ -0.8
UPK1A-201ENST00000222275 C17orf77Q96MU5 243 aa10.08□□□□□ -0.8
UPK1A-201ENST00000222275 TRAV8-2A0A0B4J237 113 aa10.07□□□□□ -0.8
UPK1A-201ENST00000222275 KIR2DL5BA0A0G2JN68 375 aa10.07□□□□□ -0.8
UPK1A-201ENST00000222275 KIR2DL5BA0A0G2JPC4 375 aa10.07□□□□□ -0.8
UPK1A-201ENST00000222275 TEX46H3BTG2 121 aa10.07□□□□□ -0.8
UPK1A-201ENST00000222275 DUSP14O95147 198 aaKnown RBP10.07□□□□□ -0.8
UPK1A-201ENST00000222275 OR10J4P0C629 311 aa10.07□□□□□ -0.8
UPK1A-201ENST00000222275 NUTF2P61970 127 aaKnown RBP10.07□□□□□ -0.8
UPK1A-201ENST00000222275 KIR2DL5AQ8N109 375 aa10.07□□□□□ -0.8
UPK1A-201ENST00000222275 ZNF738Q8NE65 137 aa10.07□□□□□ -0.8
UPK1A-201ENST00000222275 KIR2DL5BQ8NHK3 375 aa10.07□□□□□ -0.8
UPK1A-201ENST00000222275 BLNKQ8WV28 456 aa10.07□□□□□ -0.8
UPK1A-201ENST00000222275 SAV1Q9H4B6 383 aaPredicted RBP10.07□□□□□ -0.8
UPK1A-201ENST00000222275 EDA2RQ9HAV5 297 aa10.07□□□□□ -0.8
UPK1A-201ENST00000222275 RETNQ9HD89 108 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms