RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 TEX46H3BTG2 121 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 ISLRO14498 428 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 HMGB3O15347 200 aaKnown RBP9.86□□□□□ -0.83
TIMP1-201ENST00000218388 OR10J4P0C629 311 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 NBEAP1P0C6P0 100 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 ARL14EPLP0DKL9 152 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 CD81P60033 236 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 KRTAP10-11P60412 298 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 ALKAL2Q6UX46 152 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 FAM110AQ9BQ89 295 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 MAP1LC3BQ9GZQ8 125 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 TMEM167BQ9NRX6 74 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 CLEC5AQ9NY25 188 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 MGAM2Q2M2H8 2515 aa9.86□□□□□ -0.83
TIMP1-201ENST00000218388 TRBV19A0A075B6N1 114 aa9.85□□□□□ -0.83
TIMP1-201ENST00000218388 OR11H12B2RN74 326 aa9.85□□□□□ -0.83
TIMP1-201ENST00000218388 ZNF253O75346 499 aa9.85□□□□□ -0.83
TIMP1-201ENST00000218388 H2AFB1P0C5Y9 115 aa9.85□□□□□ -0.83
TIMP1-201ENST00000218388 PSG9Q00887 426 aa9.85□□□□□ -0.83
TIMP1-201ENST00000218388 ZNF726P1Q15940 193 aa9.85□□□□□ -0.83
TIMP1-201ENST00000218388 IQCF2Q8IXL9 164 aa9.85□□□□□ -0.83
TIMP1-201ENST00000218388 BLNKQ8WV28 456 aa9.85□□□□□ -0.83
TIMP1-201ENST00000218388 FXYD5Q96DB9 178 aa9.85□□□□□ -0.83
TIMP1-201ENST00000218388 H3BQ15 152 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 SOCS3O14543 225 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 EIF3GO75821 320 aaKnown RBP eCLIP9.84□□□□□ -0.832e-6■■■■■ 29.6
TIMP1-201ENST00000218388 IFNA7P01567 189 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 ZNF688P0C7X2 276 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 GCHFRP30047 84 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 FHITP49789 147 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 FAM74A1Q5RGS3 127 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 SSX7Q7RTT5 188 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 SFT2D1Q8WV19 159 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 ZNF503Q96F45 646 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 PRR25Q96S07 402 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 AAMDCQ9H7C9 122 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 ZNF331Q9NQX6 463 aaPredicted RBP9.84□□□□□ -0.83
TIMP1-201ENST00000218388 ZNF586Q9NXT0 402 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 PLA2G2EQ9NZK7 142 aa9.84□□□□□ -0.83
TIMP1-201ENST00000218388 ZNF705EA8MWA4 302 aaPredicted RBP9.83□□□□□ -0.84
TIMP1-201ENST00000218388 H3BTX0 84 aa9.83□□□□□ -0.84
TIMP1-201ENST00000218388 HBE1P02100 147 aa9.83□□□□□ -0.84
TIMP1-201ENST00000218388 SNRPCP09234 159 aaKnown RBP9.83□□□□□ -0.84
TIMP1-201ENST00000218388 CD7P09564 240 aa9.83□□□□□ -0.84
TIMP1-201ENST00000218388 DEFB131AP59861 70 aa9.83□□□□□ -0.84
TIMP1-201ENST00000218388 BLOC1S1P78537 153 aa9.83□□□□□ -0.84
TIMP1-201ENST00000218388 PSMG4Q5JS54 123 aa9.83□□□□□ -0.84
TIMP1-201ENST00000218388 TEX261Q6UWH6 196 aa9.83□□□□□ -0.84
TIMP1-201ENST00000218388 MBD3L1Q8WWY6 194 aa9.83□□□□□ -0.84
TIMP1-201ENST00000218388 C17orf77Q96MU5 243 aa9.83□□□□□ -0.84
TIMP1-201ENST00000218388 LINC00052Q96N35 136 aa9.83□□□□□ -0.84
TIMP1-201ENST00000218388 MAP6D1Q9H9H5 199 aa9.83□□□□□ -0.84
TIMP1-201ENST00000218388 UBQLN2Q9UHD9 624 aa9.83□□□□□ -0.84
TIMP1-201ENST00000218388 PPT1P50897 306 aa9.82□□□□□ -0.84
TIMP1-201ENST00000218388 FGF8P55075 233 aaPredicted RBP9.82□□□□□ -0.84
TIMP1-201ENST00000218388 ODF3L2Q3SX64 289 aa9.82□□□□□ -0.84
TIMP1-201ENST00000218388 LYPD1Q8N2G4 141 aa9.82□□□□□ -0.84
TIMP1-201ENST00000218388 FAM24BQ8N5W8 94 aa9.82□□□□□ -0.84
TIMP1-201ENST00000218388 SAT2Q96F10 170 aaPredicted RBP9.82□□□□□ -0.84
TIMP1-201ENST00000218388 PRELID1Q9Y255 219 aa9.82□□□□□ -0.84
TIMP1-201ENST00000218388 TRAV8-2A0A0B4J237 113 aa9.81□□□□□ -0.84
TIMP1-201ENST00000218388 TRAV1-1A0A0B4J248 108 aa9.81□□□□□ -0.84
TIMP1-201ENST00000218388 SLC17A3O00476 420 aa9.81□□□□□ -0.84
TIMP1-201ENST00000218388 PSG3Q16557 428 aa9.81□□□□□ -0.84
TIMP1-201ENST00000218388 ZNF738Q8NE65 137 aa9.81□□□□□ -0.84
TIMP1-201ENST00000218388 ZNF680Q8NEM1 530 aa9.81□□□□□ -0.84
TIMP1-201ENST00000218388 SUN5Q8TC36 379 aa9.81□□□□□ -0.84
TIMP1-201ENST00000218388 MRPL53Q96EL3 112 aaKnown RBP9.81□□□□□ -0.84
TIMP1-201ENST00000218388 AURKAIP1Q9NWT8 199 aaPredicted RBP9.81□□□□□ -0.84
TIMP1-201ENST00000218388 NDUFB4O95168 129 aa9.8□□□□□ -0.84
TIMP1-201ENST00000218388 CSN1S1P47710 185 aa9.8□□□□□ -0.84
TIMP1-201ENST00000218388 RANP62826 216 aaKnown RBP9.8□□□□□ -0.84
TIMP1-201ENST00000218388 EBLN2Q6P2I7 272 aa9.8□□□□□ -0.84
TIMP1-201ENST00000218388 Q8N1Y9 231 aa9.8□□□□□ -0.84
TIMP1-201ENST00000218388 RNF182Q8N6D2 247 aa9.8□□□□□ -0.84
TIMP1-201ENST00000218388 Q9H3A6 140 aa9.8□□□□□ -0.84
TIMP1-201ENST00000218388 OTORQ9NRC9 128 aa9.8□□□□□ -0.84
TIMP1-201ENST00000218388 C19orf73Q9NVV2 129 aa9.8□□□□□ -0.84
TIMP1-201ENST00000218388 A0A1B0GV50 99 aa9.79□□□□□ -0.84
TIMP1-201ENST00000218388 A0A1W2PRE2 83 aa9.79□□□□□ -0.84
TIMP1-201ENST00000218388 ICAM4Q14773 271 aa9.79□□□□□ -0.84
TIMP1-201ENST00000218388 IGFL4Q6B9Z1 124 aa9.79□□□□□ -0.84
TIMP1-201ENST00000218388 FOXI2Q6ZQN5 318 aa9.79□□□□□ -0.84
TIMP1-201ENST00000218388 APRG1Q8IVJ8 170 aa9.79□□□□□ -0.84
TIMP1-201ENST00000218388 CMTM2Q8TAZ6 248 aa9.79□□□□□ -0.84
TIMP1-201ENST00000218388 RXFP4Q8TDU9 374 aa9.79□□□□□ -0.84
TIMP1-201ENST00000218388 C20orf173Q96LM9 149 aa9.79□□□□□ -0.84
TIMP1-201ENST00000218388 NKX6-2Q9C056 277 aaPredicted RBP9.79□□□□□ -0.84
TIMP1-201ENST00000218388 TMPRSS5Q9H3S3 457 aa9.79□□□□□ -0.84
TIMP1-201ENST00000218388 TUBA4BQ9H853 241 aa9.79□□□□□ -0.84
TIMP1-201ENST00000218388 ARL2-SNX15V9GYD0 113 aa9.79□□□□□ -0.84
TIMP1-201ENST00000218388 PGPA6NDG6 321 aa9.78□□□□□ -0.84
TIMP1-201ENST00000218388 IFNA1P01562 189 aa9.78□□□□□ -0.84
TIMP1-201ENST00000218388 STHQ8IWL8 128 aa9.78□□□□□ -0.84
TIMP1-201ENST00000218388 EXOC3-AS1Q8N2X6 119 aa9.78□□□□□ -0.84
TIMP1-201ENST00000218388 DEFB125Q8N687 156 aa9.78□□□□□ -0.84
TIMP1-201ENST00000218388 RPUSD4Q96CM3 377 aaKnown RBP9.78□□□□□ -0.84
TIMP1-201ENST00000218388 WFDC10AQ9H1F0 79 aa9.78□□□□□ -0.84
TIMP1-201ENST00000218388 SRD5A3Q9H8P0 318 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms