RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 HIST1H2BMQ99879 126 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 VPREB3Q9UKI3 123 aa14.35□□□□□ -0.11
CTSA-201ENST00000191018 TRBV6-1A0A0K0K1D8 114 aa14.34□□□□□ -0.11
CTSA-201ENST00000191018 KLK15Q9H2R5 256 aa14.34□□□□□ -0.11
CTSA-201ENST00000191018 CREBBPQ92793 2442 aa14.34□□□□□ -0.11
CTSA-201ENST00000191018 ZNF320A2RRD8 509 aa14.33□□□□□ -0.11
CTSA-201ENST00000191018 UBE2CO00762 179 aa14.33□□□□□ -0.11
CTSA-201ENST00000191018 RPEL1Q2QD12 228 aa14.33□□□□□ -0.11
CTSA-201ENST00000191018 HELZ2Q9BYK8 2649 aaKnown RBP14.33□□□□□ -0.12
CTSA-201ENST00000191018 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.33□□□□□ -0.12
CTSA-201ENST00000191018 ZNF253O75346 499 aa14.33□□□□□ -0.12
CTSA-201ENST00000191018 GOLT1AQ6ZVE7 132 aa14.33□□□□□ -0.12
CTSA-201ENST00000191018 CIARTQ8N365 385 aaPredicted RBP14.33□□□□□ -0.12
CTSA-201ENST00000191018 U3KQE9 123 aa14.33□□□□□ -0.12
CTSA-201ENST00000191018 TEX15Q9BXT5 2789 aa14.32□□□□□ -0.12
CTSA-201ENST00000191018 TRGC1P0CF51 173 aa14.32□□□□□ -0.12
CTSA-201ENST00000191018 PF4V1P10720 104 aa14.32□□□□□ -0.12
CTSA-201ENST00000191018 ARL3P36405 182 aa14.32□□□□□ -0.12
CTSA-201ENST00000191018 PSG9Q00887 426 aa14.32□□□□□ -0.12
CTSA-201ENST00000191018 Q86TA4 180 aa14.32□□□□□ -0.12
CTSA-201ENST00000191018 TMEM75Q8N9X5 138 aa14.32□□□□□ -0.12
CTSA-201ENST00000191018 A0A087X0K7 114 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 TRAV8-1A0A0A6YYK1 113 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 DIRC3C9JPN6 131 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 TMEM95Q3KNT9 176 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 ACTL10Q5JWF8 245 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 C1orf194Q5T5A4 169 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 ARL6IP6Q8N6S5 226 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 AAMDCQ9H7C9 122 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 PDZD2O15018 2839 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 M0R3E3 92 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 TRBV12-3P01733 135 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 FABP9Q0Z7S8 132 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 TMEM183AQ8IXX5 376 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 NUDT10Q8NFP7 164 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 NUDT11Q96G61 164 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 METTL26Q96S19 204 aa14.31□□□□□ -0.12
CTSA-201ENST00000191018 ZNF469Q96JG9 3925 aaPredicted RBP14.3□□□□□ -0.12
CTSA-201ENST00000191018 A0A0G2JLM5 398 aa14.3□□□□□ -0.12
CTSA-201ENST00000191018 SMIM27A0A1W2PRY6 76 aa14.3□□□□□ -0.12
CTSA-201ENST00000191018 IGHG4P01861 327 aa14.3□□□□□ -0.12
CTSA-201ENST00000191018 SMUG1Q53HV7 270 aa14.3□□□□□ -0.12
CTSA-201ENST00000191018 ITPR3Q14573 2671 aa14.3□□□□□ -0.12
CTSA-201ENST00000191018 ZNF705GA8MUZ8 300 aaPredicted RBP14.29□□□□□ -0.12
CTSA-201ENST00000191018 APOHP02749 345 aaPredicted RBP14.29□□□□□ -0.12
CTSA-201ENST00000191018 ZNF492Q9P255 531 aa14.29□□□□□ -0.12
CTSA-201ENST00000191018 C19orf71A6NCJ1 209 aa14.29□□□□□ -0.12
CTSA-201ENST00000191018 K7EQM0 130 aa14.29□□□□□ -0.12
CTSA-201ENST00000191018 NDUFA4O00483 81 aa14.29□□□□□ -0.12
CTSA-201ENST00000191018 HOXA3O43365 443 aaPredicted RBP14.29□□□□□ -0.12
CTSA-201ENST00000191018 PSMB8P28062 276 aa14.29□□□□□ -0.12
CTSA-201ENST00000191018 PSG3Q16557 428 aa14.29□□□□□ -0.12
CTSA-201ENST00000191018 PRR27Q6MZM9 219 aa14.29□□□□□ -0.12
CTSA-201ENST00000191018 ZNF331Q9NQX6 463 aaPredicted RBP14.29□□□□□ -0.12
CTSA-201ENST00000191018 SERTAD4Q9NUC0 356 aa14.29□□□□□ -0.12
CTSA-201ENST00000191018 MXRA5Q9NR99 2828 aa14.29□□□□□ -0.12
CTSA-201ENST00000191018 SERTM2A0A1B0GWG4 89 aa14.28□□□□□ -0.12
CTSA-201ENST00000191018 TMEM89A2RUT3 159 aa14.28□□□□□ -0.12
CTSA-201ENST00000191018 GATCO43716 136 aaKnown RBP14.28□□□□□ -0.12
CTSA-201ENST00000191018 IGHV3-11P01762 117 aa14.28□□□□□ -0.12
CTSA-201ENST00000191018 NDUFA6P56556 154 aa14.28□□□□□ -0.12
CTSA-201ENST00000191018 LINC00322Q6ZN03 302 aaPredicted RBP14.28□□□□□ -0.12
CTSA-201ENST00000191018 LCNL1Q6ZST4 164 aa14.28□□□□□ -0.12
CTSA-201ENST00000191018 OR4X2Q8NGF9 303 aa14.28□□□□□ -0.12
CTSA-201ENST00000191018 PRSS22Q9GZN4 317 aa14.28□□□□□ -0.12
CTSA-201ENST00000191018 PRNTQ86SH4 94 aa14.27□□□□□ -0.12
CTSA-201ENST00000191018 GRAMD2BQ96HH9 432 aa14.27□□□□□ -0.12
CTSA-201ENST00000191018 PSG8Q9UQ74 426 aa14.27□□□□□ -0.12
CTSA-201ENST00000191018 ZFP30Q9Y2G7 519 aa14.27□□□□□ -0.12
CTSA-201ENST00000191018 ZNF207O43670 478 aaKnown RBP14.27□□□□□ -0.13
CTSA-201ENST00000191018 CA1P00915 261 aaPredicted RBP14.27□□□□□ -0.13
CTSA-201ENST00000191018 HOXA5P20719 270 aa14.27□□□□□ -0.13
CTSA-201ENST00000191018 UNQ9165/PRO28630Q6UXU0 137 aa14.27□□□□□ -0.13
CTSA-201ENST00000191018 FOXC2Q99958 501 aa14.27□□□□□ -0.13
CTSA-201ENST00000191018 ZNF702PQ9H963 129 aa14.27□□□□□ -0.13
CTSA-201ENST00000191018 IGHV3-66A0A0C4DH42 116 aa14.26□□□□□ -0.13
CTSA-201ENST00000191018 CSN1S1P47710 185 aa14.26□□□□□ -0.13
CTSA-201ENST00000191018 FAM209BQ5JX69 171 aa14.26□□□□□ -0.13
CTSA-201ENST00000191018 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.26□□□□□ -0.13
CTSA-201ENST00000191018 ZNF785A8K8V0 405 aa14.25□□□□□ -0.13
CTSA-201ENST00000191018 Q71RC1 249 aaPredicted RBP14.25□□□□□ -0.13
CTSA-201ENST00000191018 TEX29Q8N6K0 151 aa14.25□□□□□ -0.13
CTSA-201ENST00000191018 TRAPPC1Q9Y5R8 145 aa14.25□□□□□ -0.13
CTSA-201ENST00000191018 SMAD7O15105 426 aaKnown RBP14.25□□□□□ -0.13
CTSA-201ENST00000191018 CT83Q5H943 113 aa14.25□□□□□ -0.13
CTSA-201ENST00000191018 C16orf54Q6UWD8 224 aa14.25□□□□□ -0.13
CTSA-201ENST00000191018 NPFFR1Q9GZQ6 430 aa14.25□□□□□ -0.13
CTSA-201ENST00000191018 IGHV3OR16-13A0A075B7E8 117 aa14.24□□□□□ -0.13
CTSA-201ENST00000191018 IGHV3-49A0A0A0MS15 119 aa14.24□□□□□ -0.13
CTSA-201ENST00000191018 IGHV3-74A0A0B4J1X5 117 aa14.24□□□□□ -0.13
CTSA-201ENST00000191018 NPIPB6E9PJ23 425 aa14.24□□□□□ -0.13
CTSA-201ENST00000191018 CHEK1O14757 476 aa14.24□□□□□ -0.13
CTSA-201ENST00000191018 AKR1D1P51857 326 aa14.24□□□□□ -0.13
CTSA-201ENST00000191018 TCL1AP56279 114 aa14.24□□□□□ -0.13
CTSA-201ENST00000191018 C10orf99Q6UWK7 81 aa14.24□□□□□ -0.13
CTSA-201ENST00000191018 TSKUQ8WUA8 353 aa14.24□□□□□ -0.13
CTSA-201ENST00000191018 GLMPQ8WWB7 406 aa14.24□□□□□ -0.13
CTSA-201ENST00000191018 SLC50A1Q9BRV3 221 aa14.24□□□□□ -0.13
CTSA-201ENST00000191018 IZUMO1RA6ND01 250 aa14.23□□□□□ -0.13
CTSA-201ENST00000191018 FRMD6-AS1P0C7T7 363 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms