RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 OR9G4Q8NGQ1 327 aa9.13□□□□□ -0.95
PKP2-201ENST00000070846 AGMATQ9BSE5 352 aa9.13□□□□□ -0.95
PKP2-201ENST00000070846 CXorf65A6NEN9 183 aa9.13□□□□□ -0.95
PKP2-201ENST00000070846 C19orf84I3L1E1 186 aa9.13□□□□□ -0.95
PKP2-201ENST00000070846 OCC1Q8TAD7 63 aa9.13□□□□□ -0.95
PKP2-201ENST00000070846 BLCAPP62952 87 aa9.13□□□□□ -0.95
PKP2-201ENST00000070846 ELANEP08246 267 aa9.13□□□□□ -0.95
PKP2-201ENST00000070846 M0R143 59 aa9.12□□□□□ -0.95
PKP2-201ENST00000070846 TOMM40O96008 361 aa9.12□□□□□ -0.95
PKP2-201ENST00000070846 RPL23P62829 140 aaKnown RBP9.12□□□□□ -0.95
PKP2-201ENST00000070846 CIRBPQ14011 172 aaKnown RBP9.12□□□□□ -0.95
PKP2-201ENST00000070846 IGKV3D-20A0A0C4DH25 116 aa9.12□□□□□ -0.95
PKP2-201ENST00000070846 APOHP02749 345 aaPredicted RBP9.12□□□□□ -0.95
PKP2-201ENST00000070846 LGALS3P17931 250 aaKnown RBP9.12□□□□□ -0.95
PKP2-201ENST00000070846 WT1-ASQ06250 92 aa9.12□□□□□ -0.95
PKP2-201ENST00000070846 MST1LQ2TV78 715 aa9.12□□□□□ -0.95
PKP2-201ENST00000070846 OR10J3Q5JRS4 329 aa9.12□□□□□ -0.95
PKP2-201ENST00000070846 SCGB3A1Q96QR1 104 aa9.12□□□□□ -0.95
PKP2-201ENST00000070846 NDUFA4L2Q9NRX3 87 aa9.12□□□□□ -0.95
PKP2-201ENST00000070846 TMEM14BQ9NUH8 114 aa9.12□□□□□ -0.95
PKP2-201ENST00000070846 TCRAP04437 139 aa9.12□□□□□ -0.95
PKP2-201ENST00000070846 SSBP4Q9BWG4 385 aaPredicted RBP9.12□□□□□ -0.95
PKP2-201ENST00000070846 TMEM160Q9NX00 188 aa9.12□□□□□ -0.95
PKP2-201ENST00000070846 GZMBP10144 247 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 GFI1BQ5VTD9 330 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 MRAPQ8TCY5 172 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 DEFB104AQ8WTQ1 72 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 TMEM70Q9BUB7 260 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 INSP01308 110 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 IGLV3-1P01715 115 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 DTX2Q86UW9 622 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 LINC00477Q96M19 166 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 JKAMPQ9P055 326 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 CENPVL3A0A0U1RRI6 287 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 J3QR89 54 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 PLXNB1O43157 2135 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 DEFB136Q30KP8 78 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 ARL6IP6Q8N6S5 226 aa9.11□□□□□ -0.95
PKP2-201ENST00000070846 CRPP02741 224 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 COTL1Q14019 142 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 OR13C6PQ8NH95 151 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 ST20Q9HBF5 79 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 HOXB4P17483 251 aaPredicted RBP9.1□□□□□ -0.95
PKP2-201ENST00000070846 FOXL1Q12952 345 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 PSG3Q16557 428 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 SPINK13Q1W4C9 94 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 MBD3L1Q8WWY6 194 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 HECTD1Q9ULT8 2610 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 TRBV9A0A0B4J1U6 114 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 LYRM7Q5U5X0 104 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 MRAP2Q96G30 205 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 C2orf88Q9BSF0 95 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 PRADC1Q9BSG0 188 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 FOLR2P14207 255 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 MSMPQ1L6U9 139 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 VGLL1Q99990 258 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 FGF23Q9GZV9 251 aaPredicted RBP9.1□□□□□ -0.95
PKP2-201ENST00000070846 DNAH12Q6ZR08 3092 aa9.1□□□□□ -0.95
PKP2-201ENST00000070846 TRAV8-6A0A0B4J262 113 aa9.09□□□□□ -0.95
PKP2-201ENST00000070846 OR11H2Q8NH07 326 aa9.09□□□□□ -0.95
PKP2-201ENST00000070846 SOX21Q9Y651 276 aaPredicted RBP9.09□□□□□ -0.95
PKP2-201ENST00000070846 ATOH7Q8N100 152 aa9.09□□□□□ -0.95
PKP2-201ENST00000070846 ZNF414Q96IQ9 312 aa9.09□□□□□ -0.95
PKP2-201ENST00000070846 EML6Q6ZMW3 1958 aa9.09□□□□□ -0.95
PKP2-201ENST00000070846 MALP21145 153 aa9.09□□□□□ -0.95
PKP2-201ENST00000070846 RPL36AP83881 106 aaKnown RBP9.09□□□□□ -0.95
PKP2-201ENST00000070846 RPL36ALQ969Q0 106 aaKnown RBP9.09□□□□□ -0.95
PKP2-201ENST00000070846 SHANK2-AS3Q9BTD1 123 aa9.09□□□□□ -0.95
PKP2-201ENST00000070846 VCX2Q9H322 139 aa9.09□□□□□ -0.95
PKP2-201ENST00000070846 LHBP01229 141 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 OSTCQ9NRP0 149 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 E9PQ18 207 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 RNASE1P07998 156 aaKnown RBP9.08□□□□□ -0.96
PKP2-201ENST00000070846 YPEL3P61236 119 aaPredicted RBP9.08□□□□□ -0.96
PKP2-201ENST00000070846 C8orf86Q6ZUL3 223 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 GTF2H5Q6ZYL4 71 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 RNF182Q8N6D2 247 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 WFDC11Q8NEX6 87 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 RAB37Q96AX2 223 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 MCRIP2Q9BUT9 160 aaKnown RBP9.08□□□□□ -0.96
PKP2-201ENST00000070846 BRCA2P51587 3418 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 A0A1B0GW15 77 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 IGKV1-39P01597 117 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 IGKV1D-39P04432 117 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 EVI2AP22794 236 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 IFI27P40305 119 aaPredicted RBP9.08□□□□□ -0.96
PKP2-201ENST00000070846 ZNF876PQ49A33 203 aa9.08□□□□□ -0.96
PKP2-201ENST00000070846 IZUMO1RA6ND01 250 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 PRSS47A8MTI9 375 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 CCL24O00175 119 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 RPLP1P05386 114 aaKnown RBP9.07□□□□□ -0.96
PKP2-201ENST00000070846 ZFP36P26651 326 aaKnown RBP9.07□□□□□ -0.96
PKP2-201ENST00000070846 DERL1Q9BUN8 251 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 PCNX3Q9H6A9 2034 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 KNCNA6PVL3 124 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 F2Z2F3 143 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 ATP5LO75964 103 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 CFPP27918 469 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 CFAP161Q6P656 301 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 OR11H6Q8NGC7 330 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms