RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 C8orf46Q8TAG6 207 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 WIPF2Q8TF74 440 aaPredicted RBP10.37□□□□□ -0.75
CTNS-201ENST00000046640 C7orf69Q9H7B7 122 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 IGHV1-24A0A0C4DH33 117 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 LEPROTL1O95214 131 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 IGKV1-17P01599 117 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 COL8A1P27658 744 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 MPV17L2Q567V2 206 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 VMO1Q7Z5L0 202 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 ZNF738Q8NE65 137 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 SELENOKQ9Y6D0 94 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 COX11Q9Y6N1 276 aa10.37□□□□□ -0.75
CTNS-201ENST00000046640 GP9P14770 177 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 SLC25A39Q9BZJ4 359 aaPredicted RBP10.36□□□□□ -0.75
CTNS-201ENST00000046640 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 CBY3A6NI87 242 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 A8MWL6 223 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 K7EIM0 57 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 CDKN1BP46527 198 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 VAMP3Q15836 100 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 MUC21Q5SSG8 566 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 C11orf71Q6IPW1 123 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 CFHR4Q92496 578 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 RNF24Q9Y225 148 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 PKD1L2Q7Z442 2459 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 TOMM40O96008 361 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 TCRAP04437 139 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 MYCNOSP40205 109 aa10.36□□□□□ -0.75
CTNS-201ENST00000046640 KLF5Q13887 457 aaPredicted RBP10.36□□□□□ -0.75
CTNS-201ENST00000046640 A0A1B0GXF2 115 aa10.35□□□□□ -0.75
CTNS-201ENST00000046640 K7EP13 123 aa10.35□□□□□ -0.75
CTNS-201ENST00000046640 IL4P05112 153 aa10.35□□□□□ -0.75
CTNS-201ENST00000046640 OR4F17Q8NGA8 305 aa10.35□□□□□ -0.75
CTNS-201ENST00000046640 ZC2HC1AQ96GY0 325 aa10.35□□□□□ -0.75
CTNS-201ENST00000046640 CHRDL1Q9BU40 450 aa10.35□□□□□ -0.75
CTNS-201ENST00000046640 NUDT3O95989 172 aa10.35□□□□□ -0.75
CTNS-201ENST00000046640 NDPQ00604 133 aa10.35□□□□□ -0.75
CTNS-201ENST00000046640 RASL11AQ6T310 242 aa10.35□□□□□ -0.75
CTNS-201ENST00000046640 STXBP6Q8NFX7 210 aa10.35□□□□□ -0.75
CTNS-201ENST00000046640 TMSB15BA0A087X1C1 80 aa10.34□□□□□ -0.75
CTNS-201ENST00000046640 OR2J3O76001 311 aa10.34□□□□□ -0.75
CTNS-201ENST00000046640 FCGR2BP31994 310 aaPredicted RBP10.34□□□□□ -0.75
CTNS-201ENST00000046640 FXYD7P58549 80 aa10.34□□□□□ -0.75
CTNS-201ENST00000046640 PVRIGQ6DKI7 326 aa10.34□□□□□ -0.75
CTNS-201ENST00000046640 OR4C5Q8NGB2 326 aa10.34□□□□□ -0.75
CTNS-201ENST00000046640 OR11H6Q8NGC7 330 aa10.34□□□□□ -0.75
CTNS-201ENST00000046640 TMUB1Q9BVT8 246 aa10.34□□□□□ -0.75
CTNS-201ENST00000046640 SYS1-DBNDD2H3BUS1 97 aa10.34□□□□□ -0.75
CTNS-201ENST00000046640 PRTN3P24158 256 aa10.34□□□□□ -0.75
CTNS-201ENST00000046640 CEACAM3P40198 252 aa10.34□□□□□ -0.75
CTNS-201ENST00000046640 FAM120AOSQ5T036 256 aa10.34□□□□□ -0.75
CTNS-201ENST00000046640 C5orf17Q8NAS9 161 aa10.34□□□□□ -0.75
CTNS-201ENST00000046640 MRPS16Q9Y3D3 137 aaKnown RBP10.34□□□□□ -0.75
CTNS-201ENST00000046640 C5orf64Q2M2E5 130 aa10.33□□□□□ -0.76
CTNS-201ENST00000046640 MLST8Q9BVC4 326 aa10.33□□□□□ -0.76
CTNS-201ENST00000046640 PIEZO1Q92508 2521 aa10.33□□□□□ -0.76
CTNS-201ENST00000046640 LOC389332A0A1B0GUA5 103 aa10.33□□□□□ -0.76
CTNS-201ENST00000046640 C19orf84I3L1E1 186 aa10.33□□□□□ -0.76
CTNS-201ENST00000046640 GNG7O60262 68 aa10.33□□□□□ -0.76
CTNS-201ENST00000046640 RBPMS2Q6ZRY4 209 aaKnown RBP10.33□□□□□ -0.76
CTNS-201ENST00000046640 CRYBG3Q68DQ2 2970 aa10.33□□□□□ -0.76
CTNS-201ENST00000046640 NEU4Q8WWR8 484 aaPredicted RBP10.32□□□□□ -0.76
CTNS-201ENST00000046640 CFAP46Q8IYW2 2715 aa10.32□□□□□ -0.76
CTNS-201ENST00000046640 A0A087X0K7 114 aa10.32□□□□□ -0.76
CTNS-201ENST00000046640 IGHV2-70DA0A0C4DH43 119 aa10.32□□□□□ -0.76
CTNS-201ENST00000046640 M0R3E3 92 aa10.32□□□□□ -0.76
CTNS-201ENST00000046640 LTAP01374 205 aa10.32□□□□□ -0.76
CTNS-201ENST00000046640 ARMS2P0C7Q2 107 aa10.32□□□□□ -0.76
CTNS-201ENST00000046640 FOXE3Q13461 319 aa10.32□□□□□ -0.76
CTNS-201ENST00000046640 ATP5L2Q7Z4Y8 100 aa10.32□□□□□ -0.76
CTNS-201ENST00000046640 FMC1Q96HJ9 113 aa10.32□□□□□ -0.76
CTNS-201ENST00000046640 UTP20O75691 2785 aaKnown RBP10.32□□□□□ -0.76
CTNS-201ENST00000046640 IGHV3OR16-10A0A075B7F0 116 aa10.32□□□□□ -0.76
CTNS-201ENST00000046640 SERTM2A0A1B0GWG4 89 aa10.32□□□□□ -0.76
CTNS-201ENST00000046640 LOC102724200A0A096LPH7 203 aaPredicted RBP10.31□□□□□ -0.76
CTNS-201ENST00000046640 C19orf71A6NCJ1 209 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 OR2T8A6NH00 312 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 ODF3BA8MYP8 253 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 HSBP1L1C9JCN9 74 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 GNLYP22749 145 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 ZNF491Q8N8L2 437 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 RNF125Q96EQ8 232 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 PRSS22Q9GZN4 317 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 KLF12Q9Y4X4 402 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 FLNCQ14315 2725 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.31□□□□□ -0.76
CTNS-201ENST00000046640 Q86TA4 180 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 ARPC1AQ92747 370 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 FANCD2OSQ96PS1 177 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 RNF5Q99942 180 aa10.31□□□□□ -0.76
CTNS-201ENST00000046640 M0R1W7 72 aa10.3□□□□□ -0.76
CTNS-201ENST00000046640 APOHP02749 345 aaPredicted RBP10.3□□□□□ -0.76
CTNS-201ENST00000046640 TMEM11P17152 192 aa10.3□□□□□ -0.76
CTNS-201ENST00000046640 HOXB4P17483 251 aaPredicted RBP10.3□□□□□ -0.76
CTNS-201ENST00000046640 IGFL4Q6B9Z1 124 aa10.3□□□□□ -0.76
CTNS-201ENST00000046640 MAP1LC3CQ9BXW4 147 aa10.3□□□□□ -0.76
CTNS-201ENST00000046640 BPESC1Q9GZL8 116 aa10.3□□□□□ -0.76
CTNS-201ENST00000046640 CSMD2Q7Z408 3487 aa10.3□□□□□ -0.76
CTNS-201ENST00000046640 FAM106CPP0CH98 169 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms