RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 VGLL1Q99990 258 aa9.93□□□□□ -0.82
TSPAN9-201ENST00000011898 RNF115Q9Y4L5 304 aa9.93□□□□□ -0.82
TSPAN9-201ENST00000011898 UPK2O00526 184 aa9.93□□□□□ -0.82
TSPAN9-201ENST00000011898 FOXH1O75593 365 aa9.93□□□□□ -0.82
TSPAN9-201ENST00000011898 SCGB3A1Q96QR1 104 aa9.93□□□□□ -0.82
TSPAN9-201ENST00000011898 ZNF815PA8K554 130 aa9.93□□□□□ -0.82
TSPAN9-201ENST00000011898 FOXI3A8MTJ6 420 aaPredicted RBP9.92□□□□□ -0.82
TSPAN9-201ENST00000011898 NPIPB11E5RHQ5 1161 aa9.92□□□□□ -0.82
TSPAN9-201ENST00000011898 MLNRO43193 412 aa9.92□□□□□ -0.82
TSPAN9-201ENST00000011898 ZNF726P1Q15940 193 aa9.92□□□□□ -0.82
TSPAN9-201ENST00000011898 MDS2Q8NDY4 140 aa9.92□□□□□ -0.82
TSPAN9-201ENST00000011898 CGB1A6NKQ9 187 aa9.92□□□□□ -0.82
TSPAN9-201ENST00000011898 PRB4P10163 310 aaPredicted RBP9.92□□□□□ -0.82
TSPAN9-201ENST00000011898 MEIG1Q5JSS6 88 aa9.92□□□□□ -0.82
TSPAN9-201ENST00000011898 CD177Q8N6Q3 437 aa9.92□□□□□ -0.82
TSPAN9-201ENST00000011898 LINC00312Q9Y6C7 94 aa9.92□□□□□ -0.82
TSPAN9-201ENST00000011898 MALRD1Q5VYJ5 2156 aa9.92□□□□□ -0.82
TSPAN9-201ENST00000011898 TRAV3A0A0B4J244 114 aa9.92□□□□□ -0.82
TSPAN9-201ENST00000011898 PYGO2Q9BRQ0 406 aa9.92□□□□□ -0.82
TSPAN9-201ENST00000011898 IGKV3-7A0A075B6H7 116 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 ZNF503-AS2A6NEH8 195 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 TAX1BP3O14907 124 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 PLA2G5P39877 138 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 CCDC144NLQ6NUI1 221 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 ATP5L2Q7Z4Y8 100 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 YAE1D1Q9NRH1 226 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 C17orf100A8MU93 164 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 TNFRSF6BO95407 300 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 COX8AP10176 69 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 SSC4DQ8WTU2 575 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 EPG5Q9HCE0 2579 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 K7ERJ3 54 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 IGLC1P0CG04 106 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 IFITM1P13164 125 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 PDLIM4P50479 330 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 ECSCRQ19T08 205 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 ZGRF1Q86YA3 2104 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 YLPM1P49750 1951 aaKnown RBP9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 TRAV2A0A0B4J234 112 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 C9JAW5 83 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 DLX6P56179 175 aa9.91□□□□□ -0.82
TSPAN9-201ENST00000011898 IGKV1-39P01597 117 aa9.9□□□□□ -0.82
TSPAN9-201ENST00000011898 IGKV1D-39P04432 117 aa9.9□□□□□ -0.82
TSPAN9-201ENST00000011898 RNASE1P07998 156 aaKnown RBP9.9□□□□□ -0.82
TSPAN9-201ENST00000011898 BSPH1Q075Z2 132 aa9.9□□□□□ -0.82
TSPAN9-201ENST00000011898 KLF17Q5JT82 389 aaPredicted RBP9.9□□□□□ -0.82
TSPAN9-201ENST00000011898 RNF138Q8WVD3 245 aa9.9□□□□□ -0.82
TSPAN9-201ENST00000011898 PPDPFLQ8WWR9 84 aa9.9□□□□□ -0.82
TSPAN9-201ENST00000011898 FBXL15Q9H469 300 aa9.9□□□□□ -0.82
TSPAN9-201ENST00000011898 C15orf62A8K5M9 175 aa9.9□□□□□ -0.82
TSPAN9-201ENST00000011898 TOMM40O96008 361 aa9.9□□□□□ -0.82
TSPAN9-201ENST00000011898 CD24P25063 80 aa9.9□□□□□ -0.82
TSPAN9-201ENST00000011898 CD69Q07108 199 aa9.9□□□□□ -0.82
TSPAN9-201ENST00000011898 NPFFR1Q9GZQ6 430 aa9.9□□□□□ -0.82
TSPAN9-201ENST00000011898 FAM90A9PA6NNJ1 464 aa9.9□□□□□ -0.83
TSPAN9-201ENST00000011898 DNAL4O96015 105 aa9.9□□□□□ -0.83
TSPAN9-201ENST00000011898 RPL15P61313 204 aaKnown RBP9.9□□□□□ -0.83
TSPAN9-201ENST00000011898 PRCDQ00LT1 54 aa9.9□□□□□ -0.83
TSPAN9-201ENST00000011898 ARHGAP21Q5T5U3 1957 aa9.9□□□□□ -0.83
TSPAN9-201ENST00000011898 IGHV3-35A0A0C4DH35 117 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 G3V4G9 280 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 FAM53AQ6NSI3 398 aaPredicted RBP9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 LINC00479Q96M42 142 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 JMJD1CQ15652 2540 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 F2RL2O00254 374 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 MGST2Q99735 147 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 DYSFO75923 2080 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 MED13Q9UHV7 2174 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 NCR2O95944 276 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 IGKV1D-33P01593 117 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 IGKV1-33P01594 117 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 ZNF56Q15929 161 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 RASL11AQ6T310 242 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 SPANXA1Q9NS26 97 aa9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 RPUSD1Q9UJJ7 312 aaKnown RBP9.89□□□□□ -0.83
TSPAN9-201ENST00000011898 ATP5G2Q06055 141 aa9.88□□□□□ -0.83
TSPAN9-201ENST00000011898 PRB3Q04118 309 aaPredicted RBP9.88□□□□□ -0.83
TSPAN9-201ENST00000011898 LHFPL4Q7Z7J7 247 aa9.88□□□□□ -0.83
TSPAN9-201ENST00000011898 RPRMLQ8N4K4 120 aa9.88□□□□□ -0.83
TSPAN9-201ENST00000011898 C3orf56Q8N813 242 aa9.88□□□□□ -0.83
TSPAN9-201ENST00000011898 D6R8Y8 96 aa9.88□□□□□ -0.83
TSPAN9-201ENST00000011898 IGHV1-46P01743 117 aa9.88□□□□□ -0.83
TSPAN9-201ENST00000011898 ERG28Q9UKR5 140 aa9.88□□□□□ -0.83
TSPAN9-201ENST00000011898 MFAP4P55083 255 aa9.88□□□□□ -0.83
TSPAN9-201ENST00000011898 WFDC2Q14508 124 aa9.88□□□□□ -0.83
TSPAN9-201ENST00000011898 C10orf55Q5SWW7 151 aa9.88□□□□□ -0.83
TSPAN9-201ENST00000011898 FLNBO75369 2602 aaKnown RBP9.88□□□□□ -0.83
TSPAN9-201ENST00000011898 IGKV1D-17A0A075B6S4 117 aa9.87□□□□□ -0.83
TSPAN9-201ENST00000011898 MYOD1P15172 320 aa9.87□□□□□ -0.83
TSPAN9-201ENST00000011898 LINC01560Q8TB33 94 aa9.87□□□□□ -0.83
TSPAN9-201ENST00000011898 FAM57AQ8TBR7 257 aa9.87□□□□□ -0.83
TSPAN9-201ENST00000011898 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.87□□□□□ -0.83
TSPAN9-201ENST00000011898 PPP1R27Q86WC6 154 aa9.87□□□□□ -0.83
TSPAN9-201ENST00000011898 C1QTNF4Q9BXJ3 329 aa9.87□□□□□ -0.83
TSPAN9-201ENST00000011898 DKK4Q9UBT3 224 aa9.87□□□□□ -0.83
TSPAN9-201ENST00000011898 LY96Q9Y6Y9 160 aa9.87□□□□□ -0.83
TSPAN9-201ENST00000011898 S4R3C0 116 aa9.87□□□□□ -0.83
TSPAN9-201ENST00000011898 TNRC6AQ8NDV7 1962 aaKnown RBP9.87□□□□□ -0.83
TSPAN9-201ENST00000011898 COL27A1Q8IZC6 1860 aaPredicted RBP9.87□□□□□ -0.83
TSPAN9-201ENST00000011898 B9A039 149 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms