RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 NBEAP1P0C6P0 100 aa13.52□□□□□ -0.25
PHGDH-232ENST00000641947 IGLC2P0DOY2 106 aa13.52□□□□□ -0.25
PHGDH-232ENST00000641947 AKR1C3P42330 323 aa13.52□□□□□ -0.25
PHGDH-232ENST00000641947 TEX38Q6PEX7 206 aa13.52□□□□□ -0.25
PHGDH-232ENST00000641947 UNQ9165/PRO28630Q6UXU0 137 aa13.52□□□□□ -0.25
PHGDH-232ENST00000641947 C11orf52Q96A22 123 aa13.52□□□□□ -0.25
PHGDH-232ENST00000641947 C17orf77Q96MU5 243 aa13.52□□□□□ -0.25
PHGDH-232ENST00000641947 FN1P02751 2386 aaKnown RBP13.51□□□□□ -0.25
PHGDH-232ENST00000641947 APOHP02749 345 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-232ENST00000641947 SUMO1P63165 101 aaKnown RBP13.51□□□□□ -0.25
PHGDH-232ENST00000641947 RELQ04864 619 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-232ENST00000641947 BTN1A1Q13410 526 aa13.51□□□□□ -0.25
PHGDH-232ENST00000641947 FOXE3Q13461 319 aa13.51□□□□□ -0.25
PHGDH-232ENST00000641947 FAM74A3Q4VXF1 159 aa13.51□□□□□ -0.25
PHGDH-232ENST00000641947 NIPSNAP3BQ9BS92 247 aa13.51□□□□□ -0.25
PHGDH-232ENST00000641947 TRBV20OR9-2A0A075B6H5 130 aa13.5□□□□□ -0.25
PHGDH-232ENST00000641947 M0R036 132 aa13.5□□□□□ -0.25
PHGDH-232ENST00000641947 CD99P14209 185 aa13.5□□□□□ -0.25
PHGDH-232ENST00000641947 RANP62826 216 aaKnown RBP13.5□□□□□ -0.25
PHGDH-232ENST00000641947 SLC35B1P78383 322 aa13.5□□□□□ -0.25
PHGDH-232ENST00000641947 RNF152Q8N8N0 203 aa13.5□□□□□ -0.25
PHGDH-232ENST00000641947 CDC42EP3Q9UKI2 254 aa13.5□□□□□ -0.25
PHGDH-232ENST00000641947 INAFM1C9JVW0 142 aa13.5□□□□□ -0.25
PHGDH-232ENST00000641947 DNASE2O00115 360 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-232ENST00000641947 RNASE1P07998 156 aaKnown RBP13.5□□□□□ -0.25
PHGDH-232ENST00000641947 HIST1H1EP10412 219 aaKnown RBP13.5□□□□□ -0.25
PHGDH-232ENST00000641947 CRYBB3P26998 211 aa13.5□□□□□ -0.25
PHGDH-232ENST00000641947 BPIFA4PQ86YQ2 179 aa13.5□□□□□ -0.25
PHGDH-232ENST00000641947 SDF2L1Q9HCN8 221 aa13.5□□□□□ -0.25
PHGDH-232ENST00000641947 IGHV3OR16-13A0A075B7E8 117 aa13.49□□□□□ -0.25
PHGDH-232ENST00000641947 IGHV3-74A0A0B4J1X5 117 aa13.49□□□□□ -0.25
PHGDH-232ENST00000641947 C7orf77A4D0Y5 90 aa13.49□□□□□ -0.25
PHGDH-232ENST00000641947 SLC17A3O00476 420 aa13.49□□□□□ -0.25
PHGDH-232ENST00000641947 ELANEP08246 267 aa13.49□□□□□ -0.25
PHGDH-232ENST00000641947 HILS1P60008 231 aa13.49□□□□□ -0.25
PHGDH-232ENST00000641947 TMEM88Q6PEY1 159 aa13.49□□□□□ -0.25
PHGDH-232ENST00000641947 CBLN2Q8IUK8 224 aa13.49□□□□□ -0.25
PHGDH-232ENST00000641947 TVP23CQ96ET8 276 aa13.49□□□□□ -0.25
PHGDH-232ENST00000641947 SMAD5-AS1Q9Y6J3 95 aa13.49□□□□□ -0.25
PHGDH-232ENST00000641947 IGHV3-49A0A0A0MS15 119 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 IGHV3-66A0A0C4DH42 116 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 PGPEP1LA6NFU8 196 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 BUB3O43684 328 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 TCTEX1D4Q5JR98 221 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 HIST2H2BDQ6DRA6 164 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 KLHDC1Q8N7A1 406 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 C2CD4CQ8TF44 421 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 PEF1Q9UBV8 284 aaKnown RBP13.48□□□□□ -0.25
PHGDH-232ENST00000641947 U3KQE9 123 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 SETD2Q9BYW2 2564 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-232ENST00000641947 TRBV19A0A075B6N1 114 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 NDUFA4O00483 81 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 GNG5P63218 68 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 SCGB2A2Q13296 93 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 C18orf65Q6ZTR6 163 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 Q9H3A6 140 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 NAT8Q9UHE5 227 aa13.48□□□□□ -0.25
PHGDH-232ENST00000641947 RPL23P62829 140 aaKnown RBP13.47□□□□□ -0.25
PHGDH-232ENST00000641947 EXOC3-AS1Q8N2X6 119 aa13.47□□□□□ -0.25
PHGDH-232ENST00000641947 WIPF2Q8TF74 440 aaPredicted RBP13.47□□□□□ -0.25
PHGDH-232ENST00000641947 PGPA6NDG6 321 aa13.46□□□□□ -0.25
PHGDH-232ENST00000641947 GGCTO75223 188 aaKnown RBP13.46□□□□□ -0.25
PHGDH-232ENST00000641947 FOSL1P15407 271 aa13.46□□□□□ -0.25
PHGDH-232ENST00000641947 RPL35P42766 123 aaKnown RBP13.46□□□□□ -0.25
PHGDH-232ENST00000641947 TMEM241Q24JQ0 296 aa13.46□□□□□ -0.25
PHGDH-232ENST00000641947 FAM209BQ5JX69 171 aa13.46□□□□□ -0.25
PHGDH-232ENST00000641947 OR4F17Q8NGA8 305 aa13.46□□□□□ -0.25
PHGDH-232ENST00000641947 ZNF418Q8TF45 676 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-232ENST00000641947 TMEM190Q8WZ59 177 aa13.46□□□□□ -0.25
PHGDH-232ENST00000641947 LINC00479Q96M42 142 aa13.46□□□□□ -0.25
PHGDH-232ENST00000641947 RPS10P5Q9NQ39 176 aa13.46□□□□□ -0.25
PHGDH-232ENST00000641947 AURKAIP1Q9NWT8 199 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-232ENST00000641947 LGALS1P09382 135 aaKnown RBP13.45□□□□□ -0.26
PHGDH-232ENST00000641947 EDN2P20800 178 aa13.45□□□□□ -0.26
PHGDH-232ENST00000641947 RHEBQ15382 184 aa13.45□□□□□ -0.26
PHGDH-232ENST00000641947 SIGLEC15Q6ZMC9 328 aa13.45□□□□□ -0.26
PHGDH-232ENST00000641947 S100A7AQ86SG5 101 aa13.45□□□□□ -0.26
PHGDH-232ENST00000641947 OR8I2Q8N0Y5 310 aa13.45□□□□□ -0.26
PHGDH-232ENST00000641947 METTL26Q96S19 204 aa13.45□□□□□ -0.26
PHGDH-232ENST00000641947 CYSRT1A8MQ03 144 aa13.45□□□□□ -0.26
PHGDH-232ENST00000641947 PRB4P10163 310 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-232ENST00000641947 UBE2E2Q96LR5 201 aa13.45□□□□□ -0.26
PHGDH-232ENST00000641947 F8P00451 2351 aa13.45□□□□□ -0.26
PHGDH-232ENST00000641947 PEX7O00628 323 aa13.44□□□□□ -0.26
PHGDH-232ENST00000641947 SLC25A5P05141 298 aaKnown RBP13.44□□□□□ -0.26
PHGDH-232ENST00000641947 RPL7P18124 248 aaKnown RBP13.44□□□□□ -0.26
PHGDH-232ENST00000641947 ADIRFQ15847 76 aa13.44□□□□□ -0.26
PHGDH-232ENST00000641947 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-232ENST00000641947 IGHV4OR15-8A0A075B7B6 117 aa13.43□□□□□ -0.26
PHGDH-232ENST00000641947 A0A087WW49 117 aa13.43□□□□□ -0.26
PHGDH-232ENST00000641947 PNRC1Q12796 327 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-232ENST00000641947 LINC01551Q86U37 167 aa13.43□□□□□ -0.26
PHGDH-232ENST00000641947 OTORQ9NRC9 128 aa13.43□□□□□ -0.26
PHGDH-232ENST00000641947 EPDR1Q9UM22 224 aa13.43□□□□□ -0.26
PHGDH-232ENST00000641947 TRAV34A0A0B4J273 112 aa13.43□□□□□ -0.26
PHGDH-232ENST00000641947 SRSF2Q01130 221 aaKnown RBP13.43□□□□□ -0.26
PHGDH-232ENST00000641947 TM4SF20Q53R12 229 aa13.43□□□□□ -0.26
PHGDH-232ENST00000641947 IGF2BP2-AS1Q96M15 143 aa13.43□□□□□ -0.26
PHGDH-232ENST00000641947 RPH3ALQ9UNE2 315 aa13.43□□□□□ -0.26
PHGDH-232ENST00000641947 ZNF320A2RRD8 509 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms