RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	MARVELD1	Q9BSK0	173 aa		10.95	□□□□□ -0.66
PHGDH-231	ENST00000641939	ARL6	Q9H0F7	186 aa		10.95	□□□□□ -0.66
PHGDH-231	ENST00000641939	C11orf68	Q9H3H3	251 aa	Known RBP	10.95	□□□□□ -0.66
PHGDH-231	ENST00000641939	SAV1	Q9H4B6	383 aa	Predicted RBP	10.95	□□□□□ -0.66
PHGDH-231	ENST00000641939	LCE6A	A0A183	80 aa		10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	CXorf65	A6NEN9	183 aa		10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	RPL7	P18124	248 aa	Known RBP	10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	SULT1A1	P50225	295 aa		10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	GDF5OS	Q5U4N7	250 aa		10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	STX12	Q86Y82	276 aa		10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	CSNK1G2-AS1	Q8NCQ2	148 aa		10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	C17orf77	Q96MU5	243 aa		10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	UHRF2	Q96PU4	802 aa		10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	MGST2	Q99735	147 aa		10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	C1QTNF4	Q9BXJ3	329 aa		10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	UQCC1	Q9NVA1	299 aa		10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	CLEC5A	Q9NY25	188 aa		10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	DNAH1	Q9P2D7	4330 aa		10.94	□□□□□ -0.66
PHGDH-231	ENST00000641939	RYR2	Q92736	4967 aa		10.93	□□□□□ -0.66
PHGDH-231	ENST00000641939	IGSF23	A1L1A6	192 aa		10.93	□□□□□ -0.66
PHGDH-231	ENST00000641939	SIX6	O95475	246 aa		10.93	□□□□□ -0.66
PHGDH-231	ENST00000641939	S100A11	P31949	105 aa		10.93	□□□□□ -0.66
PHGDH-231	ENST00000641939	DEFB1	P60022	68 aa		10.93	□□□□□ -0.66
PHGDH-231	ENST00000641939	RAB31	Q13636	194 aa		10.93	□□□□□ -0.66
PHGDH-231	ENST00000641939	SPATA31B1P	Q5VZV4	182 aa		10.93	□□□□□ -0.66
PHGDH-231	ENST00000641939	PATE2	Q6UY27	113 aa		10.93	□□□□□ -0.66
PHGDH-231	ENST00000641939	TMEM252	Q8N6L7	170 aa		10.93	□□□□□ -0.66
PHGDH-231	ENST00000641939	NMES1	Q9C002	83 aa		10.93	□□□□□ -0.66
PHGDH-231	ENST00000641939	ARV1	Q9H2C2	271 aa		10.93	□□□□□ -0.66
PHGDH-231	ENST00000641939	RPRM	Q9NS64	109 aa		10.93	□□□□□ -0.66
PHGDH-231	ENST00000641939	RNF24	Q9Y225	148 aa		10.93	□□□□□ -0.66
PHGDH-231	ENST00000641939	NUPR2	A6NF83	97 aa		10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939	ZNF705E	A8MWA4	302 aa	Predicted RBP	10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939	RLN2	P04090	185 aa		10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939	MIF	P14174	115 aa		10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939	CAMLG	P49069	296 aa		10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939	HBG1	P69891	147 aa		10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939	HBG2	P69892	147 aa		10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939	CYCS	P99999	105 aa	Known RBP	10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939	VWC2	Q2TAL6	325 aa		10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939	EBLN2	Q6P2I7	272 aa		10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939		Q8NAQ8	132 aa		10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939	C20orf173	Q96LM9	149 aa		10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939	CLUHP3	Q96NS8	147 aa		10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939	XCL2	Q9UBD3	114 aa		10.92	□□□□□ -0.66
PHGDH-231	ENST00000641939	ALMS1	Q8TCU4	4167 aa		10.91	□□□□□ -0.66
PHGDH-231	ENST00000641939	DEFB4A	O15263	64 aa		10.91	□□□□□ -0.66
PHGDH-231	ENST00000641939	JTB	O76095	146 aa		10.91	□□□□□ -0.66
PHGDH-231	ENST00000641939	IGKV3-20	P01619	116 aa		10.91	□□□□□ -0.66
PHGDH-231	ENST00000641939	FGL1	Q08830	312 aa		10.91	□□□□□ -0.66
PHGDH-231	ENST00000641939	LINC00305	Q7Z4B0	112 aa		10.91	□□□□□ -0.66
PHGDH-231	ENST00000641939	OR4B1	Q8NGF8	309 aa		10.91	□□□□□ -0.66
PHGDH-231	ENST00000641939	WDR83OS	Q9Y284	106 aa		10.91	□□□□□ -0.66
PHGDH-231	ENST00000641939	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.9	□□□□□ -0.66
PHGDH-231	ENST00000641939		A0A087X0K7	114 aa		10.9	□□□□□ -0.66
PHGDH-231	ENST00000641939		A0A0J9YX75	114 aa		10.9	□□□□□ -0.66
PHGDH-231	ENST00000641939		E5RGE8	158 aa		10.9	□□□□□ -0.66
PHGDH-231	ENST00000641939		F6UB75	175 aa		10.9	□□□□□ -0.66
PHGDH-231	ENST00000641939	SSNA1	O43805	119 aa		10.9	□□□□□ -0.66
PHGDH-231	ENST00000641939	COX7A2P2	O60397	106 aa		10.9	□□□□□ -0.66
PHGDH-231	ENST00000641939	ATP6V1F	Q16864	119 aa		10.9	□□□□□ -0.66
PHGDH-231	ENST00000641939	FAM78B	Q5VT40	261 aa		10.9	□□□□□ -0.66
PHGDH-231	ENST00000641939	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.9	□□□□□ -0.66
PHGDH-231	ENST00000641939	C11orf45	Q8TAV5	145 aa		10.9	□□□□□ -0.66
PHGDH-231	ENST00000641939		X6R8D5	127 aa		10.9	□□□□□ -0.66
PHGDH-231	ENST00000641939	TRAV8-2	A0A0B4J237	113 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	IGHV4-28	A0A0C4DH34	117 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	UBE2L5P	A0A1B0GUS4	154 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	H2BFS	P57053	126 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	FXYD7	P58549	80 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	NANOS2	P60321	138 aa	Known RBP	10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	BAX	Q07812	192 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	LRRC37A5P	Q49AS3	106 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	C10orf113	Q5VZT2	155 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	MIC13	Q5XKP0	118 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	IGFL4	Q6B9Z1	124 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939		Q6ZRG5	221 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	ZNF709	Q8N972	641 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	TMEM37	Q8WXS4	190 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	MFF	Q9GZY8	342 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	SLC25A31	Q9H0C2	315 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	DNAJC4	Q9NNZ3	241 aa		10.89	□□□□□ -0.67
PHGDH-231	ENST00000641939	MRPS12	O15235	138 aa	Known RBP	10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	RBMY1A1	P0DJD3	496 aa	Known RBP	10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	RBMY1C	P0DJD4	496 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	RPL29	P47914	159 aa	Known RBP	10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	PRR20E	P86478	221 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	PRR20C	P86479	221 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	PRR20D	P86480	221 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	PRR20B	P86481	221 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	PRR20A	P86496	221 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	PSG9	Q00887	426 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	NHLH2	Q02577	135 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	OPCML	Q14982	345 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	RBMY1F	Q15415	496 aa	Known RBP	10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	BPIFA4P	Q86YQ2	179 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	RNF182	Q8N6D2	247 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	OR1L4	Q8NGR5	311 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	LRRC20	Q8TCA0	184 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	CHAC2	Q8WUX2	184 aa		10.88	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms