RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 PSG1P11464 419 aa7.47□□□□□ -1.21
PHGDH-222ENST00000641587 FOLR2P14207 255 aa7.47□□□□□ -1.21
PHGDH-222ENST00000641587 ADMP35318 185 aa7.47□□□□□ -1.21
PHGDH-222ENST00000641587 RPL29P47914 159 aaKnown RBP7.47□□□□□ -1.21
PHGDH-222ENST00000641587 YPEL3P61236 119 aaPredicted RBP7.47□□□□□ -1.21
PHGDH-222ENST00000641587 ACOT6Q3I5F7 207 aaPredicted RBP7.47□□□□□ -1.21
PHGDH-222ENST00000641587 FAM74A1Q5RGS3 127 aa7.47□□□□□ -1.21
PHGDH-222ENST00000641587 Q6ZRG5 221 aa7.47□□□□□ -1.21
PHGDH-222ENST00000641587 OR51G1Q8NGK1 321 aa7.47□□□□□ -1.21
PHGDH-222ENST00000641587 OR1B1Q8NGR6 318 aa7.47□□□□□ -1.21
PHGDH-222ENST00000641587 PHYHIPLQ96FC7 376 aa7.47□□□□□ -1.21
PHGDH-222ENST00000641587 C20orf24Q9BUV8 137 aa7.47□□□□□ -1.21
PHGDH-222ENST00000641587 UBQLN2Q9UHD9 624 aa7.47□□□□□ -1.21
PHGDH-222ENST00000641587 PUS1Q9Y606 427 aaKnown RBP eCLIP7.47□□□□□ -1.21
PHGDH-222ENST00000641587 RYR1P21817 5038 aa7.46□□□□□ -1.21
PHGDH-222ENST00000641587 IGHV3OR16-8A0A075B7F1 116 aa7.46□□□□□ -1.22
PHGDH-222ENST00000641587 A0A0J9YWU9 116 aa7.46□□□□□ -1.22
PHGDH-222ENST00000641587 OR2C1O95371 312 aa7.46□□□□□ -1.22
PHGDH-222ENST00000641587 IL4P05112 153 aa7.46□□□□□ -1.22
PHGDH-222ENST00000641587 ORM2P19652 201 aa7.46□□□□□ -1.22
PHGDH-222ENST00000641587 RAB2AP61019 212 aa7.46□□□□□ -1.22
PHGDH-222ENST00000641587 SERF2P84101 59 aa7.46□□□□□ -1.22
PHGDH-222ENST00000641587 TMEM41BQ5BJD5 291 aa7.46□□□□□ -1.22
PHGDH-222ENST00000641587 TEX261Q6UWH6 196 aa7.46□□□□□ -1.22
PHGDH-222ENST00000641587 TMEM61Q8N0U2 210 aa7.46□□□□□ -1.22
PHGDH-222ENST00000641587 OR1L4Q8NGR5 311 aa7.46□□□□□ -1.22
PHGDH-222ENST00000641587 RNF125Q96EQ8 232 aa7.46□□□□□ -1.22
PHGDH-222ENST00000641587 ZNF320A2RRD8 509 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 HYPMO75409 117 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 MBP02144 154 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 M6PRP20645 277 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 PRR20EP86478 221 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 PRR20CP86479 221 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 PRR20DP86480 221 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 PRR20BP86481 221 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 PRR20AP86496 221 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 FAM106AQ4KMX7 169 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 GCSAMLQ5JQS6 135 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 C10orf113Q5VZT2 155 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 FAM122CQ6P4D5 195 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 ZNF680Q8NEM1 530 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 OR10G4Q8NGN3 311 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 OR10G9Q8NGN4 311 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 OR10G7Q8NGN6 311 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 FAM213BQ8TBF2 198 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 PFDN5Q99471 154 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 VSIRQ9H7M9 311 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 SLC25A22Q9H936 323 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 MLXQ9UH92 298 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 HIGD1AQ9Y241 93 aa7.45□□□□□ -1.22
PHGDH-222ENST00000641587 A0A1W2PPV4 95 aa7.44□□□□□ -1.22
PHGDH-222ENST00000641587 NUPR2A6NF83 97 aa7.44□□□□□ -1.22
PHGDH-222ENST00000641587 ZNF705EA8MWA4 302 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-222ENST00000641587 UMAD1C9J7I0 102 aa7.44□□□□□ -1.22
PHGDH-222ENST00000641587 NDUFA4O00483 81 aa7.44□□□□□ -1.22
PHGDH-222ENST00000641587 ZNF207O43670 478 aaKnown RBP7.44□□□□□ -1.22
PHGDH-222ENST00000641587 RAB5CP51148 216 aa7.44□□□□□ -1.22
PHGDH-222ENST00000641587 IFITM2Q01629 132 aa7.44□□□□□ -1.22
PHGDH-222ENST00000641587 PXDC1Q5TGL8 231 aa7.44□□□□□ -1.22
PHGDH-222ENST00000641587 CEMP1Q6PRD7 247 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-222ENST00000641587 TOMM20LQ6UXN7 152 aa7.44□□□□□ -1.22
PHGDH-222ENST00000641587 ACTR3CQ9C0K3 210 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-222ENST00000641587 DNAJC4Q9NNZ3 241 aa7.44□□□□□ -1.22
PHGDH-222ENST00000641587 RABAC1Q9UI14 185 aa7.44□□□□□ -1.22
PHGDH-222ENST00000641587 ELOA3CA0A087WX78 387 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-222ENST00000641587 LOC102724200A0A096LPH7 203 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-222ENST00000641587 TMEM213A2RRL7 107 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 CBLN1P23435 193 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 CDC34P49427 236 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-222ENST00000641587 SULT1A2P50226 295 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 RAB14P61106 215 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 RHOBP62745 196 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 USF2Q15853 346 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-222ENST00000641587 DEFB135Q30KP9 77 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 FAM78BQ5VT40 261 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 ZNF767PQ75MW2 155 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 S100A7AQ86SG5 101 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 GATAD1Q8WUU5 269 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 RNF141Q8WVD5 230 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 TMEM190Q8WZ59 177 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 NARS2Q96I59 477 aaKnown RBP7.43□□□□□ -1.22
PHGDH-222ENST00000641587 UHRF2Q96PU4 802 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 METTL26Q96S19 204 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 RNF2Q99496 336 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 ZFAND3Q9H8U3 227 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 RPRMQ9NS64 109 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 PLA2G2EQ9NZK7 142 aa7.43□□□□□ -1.22
PHGDH-222ENST00000641587 FAT2Q9NYQ8 4349 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 IGHV3-49A0A0A0MS15 119 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 A0A1B0GV50 99 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 HMGB3O15347 200 aaKnown RBP7.42□□□□□ -1.22
PHGDH-222ENST00000641587 EIF3GO75821 320 aaKnown RBP eCLIP7.42□□□□□ -1.22
PHGDH-222ENST00000641587 NPPCP23582 126 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 S100A7P31151 101 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 FHITP49789 147 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 PLP1P60201 277 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 TM4SF20Q53R12 229 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 SPATA31B1PQ5VZV4 182 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 UNQ9165/PRO28630Q6UXU0 137 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 DPPA3Q6W0C5 159 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms