RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 IGLC1P0CG04 106 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 PLP1P60201 277 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 LYZP61626 148 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 PKIAP61925 76 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 WDR73Q6P4I2 378 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 RASL11AQ6T310 242 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 Q6YL49 198 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 C9orf139Q6ZV77 190 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 FAM231DQ6ZW35 169 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 OCC1Q8TAD7 63 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 ZNF503Q96F45 646 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 ZNF48Q96MX3 618 aaPredicted RBP6.93□□□□□ -1.3
PHGDH-219ENST00000641513 CHRDL1Q9BU40 450 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 DERL1Q9BUN8 251 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 PRDM13Q9H4Q3 707 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 CDC42EP3Q9UKI2 254 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 CELSR1Q9NYQ6 3014 aa6.93□□□□□ -1.3
PHGDH-219ENST00000641513 ITPR3Q14573 2671 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 TRAV5A0A0B4J249 113 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 HELTA6NFD8 242 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 OR2T8A6NH00 312 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 TSTD3H0UI37 97 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 CD5LO43866 347 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 IGHG2P01859 326 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 TRGV3P03979 118 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 RD3LP0DJH9 198 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 PSG1P11464 419 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 FABP4P15090 132 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 HNF1AP20823 631 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 GNG4P50150 75 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 ATP5G2Q06055 141 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 RPEL1Q2QD12 228 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 C15orf32Q32M92 178 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 GFI1BQ5VTD9 330 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 LINC00305Q7Z4B0 112 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 GBGT1Q8N5D6 347 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 SIGLECL1Q8N7X8 197 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 NECAP1Q8NC96 275 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 OR5AU1Q8NGC0 362 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 VN1R17PQ8TDU5 208 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 TMEM37Q8WXS4 190 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 EEF1AKMT3Q96AZ1 226 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 FAM167A-AS1Q96KT0 104 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 IGF2BP2-AS1Q96M15 143 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 NOL4LQ96MY1 436 aaPredicted RBP6.92□□□□□ -1.3
PHGDH-219ENST00000641513 DUX5Q96PT3 197 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 GNB1LQ9BYB4 327 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 GNB4Q9HAV0 340 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 VPREB3Q9UKI3 123 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 HIGD1AQ9Y241 93 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 TRAPPC1Q9Y5R8 145 aa6.92□□□□□ -1.3
PHGDH-219ENST00000641513 ZNF320A2RRD8 509 aa6.91□□□□□ -1.3
PHGDH-219ENST00000641513 K7EN84 100 aa6.91□□□□□ -1.3
PHGDH-219ENST00000641513 PF4V1P10720 104 aa6.91□□□□□ -1.3
PHGDH-219ENST00000641513 GPR183P32249 361 aa6.91□□□□□ -1.3
PHGDH-219ENST00000641513 TPPP2P59282 170 aa6.91□□□□□ -1.3
PHGDH-219ENST00000641513 PAFAH1B2P68402 229 aa6.91□□□□□ -1.3
PHGDH-219ENST00000641513 Q0VG73 95 aa6.91□□□□□ -1.3
PHGDH-219ENST00000641513 LBHQ53QV2 105 aaPredicted RBP6.91□□□□□ -1.3
PHGDH-219ENST00000641513 CENPWQ5EE01 88 aa6.91□□□□□ -1.3
PHGDH-219ENST00000641513 PATE2Q6UY27 113 aa6.91□□□□□ -1.3
PHGDH-219ENST00000641513 Q6ZS46 218 aa6.91□□□□□ -1.3
PHGDH-219ENST00000641513 WIPF2Q8TF74 440 aaPredicted RBP6.91□□□□□ -1.3
PHGDH-219ENST00000641513 V9GYV3 84 aa6.91□□□□□ -1.3
PHGDH-219ENST00000641513 PDZD2O15018 2839 aa6.91□□□□□ -1.3
PHGDH-219ENST00000641513 GGTLC3B5MD39 225 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 TOMM40O96008 361 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 IGKV1-17P01599 117 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 IGF1P05019 195 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 IL4P05112 153 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 MYCNOSP40205 109 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 CRIP2P52943 208 aaPredicted RBP6.9□□□□□ -1.3
PHGDH-219ENST00000641513 RANP62826 216 aaKnown RBP6.9□□□□□ -1.3
PHGDH-219ENST00000641513 UBE2L3P68036 154 aaKnown RBP6.9□□□□□ -1.3
PHGDH-219ENST00000641513 TMEM95Q3KNT9 176 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 MORN5Q5VZ52 161 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 CLEC19AQ6UXS0 136 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 TXN2Q99757 166 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 PAXXQ9BUH6 204 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 SLC25A2Q9BXI2 301 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 PRSS22Q9GZN4 317 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 NPFFR1Q9GZQ6 430 aa6.9□□□□□ -1.3
PHGDH-219ENST00000641513 TRBV7-1A0A0A6YYK4 115 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 IGHV3-35A0A0C4DH35 117 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 SMIM27A0A1W2PRY6 76 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 FAM223BA6NKX1 122 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 IGLV2-8P01709 118 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 HLA-DQA1P01909 254 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 CLEC3BP05452 202 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 PYYP10082 97 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 GZMBP10144 247 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 IQCJQ1A5X6 159 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 C19orf54Q5BKX5 351 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 FAM223AQ8IWN6 122 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 ZNF502Q8TBZ5 544 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 RNF125Q96EQ8 232 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 KLF12Q9Y4X4 402 aa6.89□□□□□ -1.31
PHGDH-219ENST00000641513 NBPF19A0A087WUL8 3843 aa6.88□□□□□ -1.31
PHGDH-219ENST00000641513 TRBV6-1A0A0K0K1D8 114 aa6.88□□□□□ -1.31
PHGDH-219ENST00000641513 F8W735 103 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms