RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 GGNBP1Q5YKI7 109 aa11.85□□□□□ -0.51
PHGDH-213ENST00000641272 AMTNQ6UX39 209 aa11.85□□□□□ -0.51
PHGDH-213ENST00000641272 BAP18Q8IXM2 172 aa11.85□□□□□ -0.51
PHGDH-213ENST00000641272 TMEM147Q9BVK8 224 aa11.85□□□□□ -0.51
PHGDH-213ENST00000641272 ZNF705GA8MUZ8 300 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-213ENST00000641272 SLC25A6P12236 298 aa11.84□□□□□ -0.51
PHGDH-213ENST00000641272 CNN1P51911 297 aaKnown RBP11.84□□□□□ -0.51
PHGDH-213ENST00000641272 LGALS9BQ3B8N2 356 aa11.84□□□□□ -0.51
PHGDH-213ENST00000641272 SAMD13Q5VXD3 122 aa11.84□□□□□ -0.51
PHGDH-213ENST00000641272 LRTM2Q8N967 370 aa11.84□□□□□ -0.51
PHGDH-213ENST00000641272 CIB3Q96Q77 187 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-213ENST00000641272 ADAP1O75689 374 aa11.83□□□□□ -0.52
PHGDH-213ENST00000641272 INSP01308 110 aa11.83□□□□□ -0.52
PHGDH-213ENST00000641272 RPP30P78346 268 aaKnown RBP11.83□□□□□ -0.52
PHGDH-213ENST00000641272 OR11H7Q8NGC8 314 aa11.83□□□□□ -0.52
PHGDH-213ENST00000641272 IGF2BP2-AS1Q96M15 143 aa11.83□□□□□ -0.52
PHGDH-213ENST00000641272 TMED3Q9Y3Q3 217 aa11.83□□□□□ -0.52
PHGDH-213ENST00000641272 TRAV12-2A0A075B6T6 113 aa11.82□□□□□ -0.52
PHGDH-213ENST00000641272 TRAV8-2A0A0B4J237 113 aa11.82□□□□□ -0.52
PHGDH-213ENST00000641272 PIGBOS1A0A0B4J2F0 54 aa11.82□□□□□ -0.52
PHGDH-213ENST00000641272 A8MTW9 85 aa11.82□□□□□ -0.52
PHGDH-213ENST00000641272 H3BRN7 92 aa11.82□□□□□ -0.52
PHGDH-213ENST00000641272 CCNKO75909 580 aa11.82□□□□□ -0.52
PHGDH-213ENST00000641272 POLR2GP62487 172 aaKnown RBP eCLIP11.82□□□□□ -0.52
PHGDH-213ENST00000641272 Q6ZR54 194 aa11.82□□□□□ -0.52
PHGDH-213ENST00000641272 ZNF575Q86XF7 245 aa11.82□□□□□ -0.52
PHGDH-213ENST00000641272 ZNF738Q8NE65 137 aa11.82□□□□□ -0.52
PHGDH-213ENST00000641272 FAM210BQ96KR6 192 aa11.82□□□□□ -0.52
PHGDH-213ENST00000641272 SLC25A39Q9BZJ4 359 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-213ENST00000641272 SLC45A2Q9UMX9 530 aa11.82□□□□□ -0.52
PHGDH-213ENST00000641272 STRAPQ9Y3F4 350 aaKnown RBP11.82□□□□□ -0.52
PHGDH-213ENST00000641272 CRXO43186 299 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-213ENST00000641272 CFDP00746 253 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-213ENST00000641272 RRAS2P62070 204 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-213ENST00000641272 OXA1LQ15070 435 aa11.81□□□□□ -0.52
PHGDH-213ENST00000641272 CYP2G1PQ6ZSU1 146 aa11.81□□□□□ -0.52
PHGDH-213ENST00000641272 UHRF2Q96PU4 802 aa11.81□□□□□ -0.52
PHGDH-213ENST00000641272 SLC25A21Q9BQT8 299 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-213ENST00000641272 CCDC160A6NGH7 325 aa11.8□□□□□ -0.52
PHGDH-213ENST00000641272 SSSCA1O60232 199 aa11.8□□□□□ -0.52
PHGDH-213ENST00000641272 IL5P05113 134 aa11.8□□□□□ -0.52
PHGDH-213ENST00000641272 DEFB130BP0DP73 79 aa11.8□□□□□ -0.52
PHGDH-213ENST00000641272 DEFB130AP0DP74 79 aa11.8□□□□□ -0.52
PHGDH-213ENST00000641272 MED14OSP0DP75 135 aa11.8□□□□□ -0.52
PHGDH-213ENST00000641272 HIST1H1AQ02539 215 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-213ENST00000641272 HIGD1AQ9Y241 93 aa11.8□□□□□ -0.52
PHGDH-213ENST00000641272 BOLA2-SMG1P6H3BVE0 249 aa11.79□□□□□ -0.52
PHGDH-213ENST00000641272 DUSP14O95147 198 aaKnown RBP11.79□□□□□ -0.52
PHGDH-213ENST00000641272 OR5G3P0C626 314 aa11.79□□□□□ -0.52
PHGDH-213ENST00000641272 LINC00869P0C866 280 aa11.79□□□□□ -0.52
PHGDH-213ENST00000641272 RAP2BP61225 183 aa11.79□□□□□ -0.52
PHGDH-213ENST00000641272 OR4D5Q8NGN0 318 aa11.79□□□□□ -0.52
PHGDH-213ENST00000641272 GPR82Q96P67 336 aa11.79□□□□□ -0.52
PHGDH-213ENST00000641272 SHANK2-AS3Q9BTD1 123 aa11.79□□□□□ -0.52
PHGDH-213ENST00000641272 PSENENQ9NZ42 101 aa11.79□□□□□ -0.52
PHGDH-213ENST00000641272 SCGB1D2O95969 90 aa11.78□□□□□ -0.52
PHGDH-213ENST00000641272 AZU1P20160 251 aa11.78□□□□□ -0.52
PHGDH-213ENST00000641272 S100A5P33763 92 aa11.78□□□□□ -0.52
PHGDH-213ENST00000641272 RHOBP62745 196 aa11.78□□□□□ -0.52
PHGDH-213ENST00000641272 FCN2Q15485 313 aa11.78□□□□□ -0.52
PHGDH-213ENST00000641272 TMEM144Q7Z5S9 345 aa11.78□□□□□ -0.52
PHGDH-213ENST00000641272 FLVCR2Q9UPI3 526 aa11.78□□□□□ -0.52
PHGDH-213ENST00000641272 LINC00854A0A1B0GVQ3 168 aa11.77□□□□□ -0.53
PHGDH-213ENST00000641272 C9orf170A2RU37 121 aa11.77□□□□□ -0.53
PHGDH-213ENST00000641272 SNRPCP09234 159 aaKnown RBP11.77□□□□□ -0.53
PHGDH-213ENST00000641272 METTL15P1P0C7V9 234 aa11.77□□□□□ -0.53
PHGDH-213ENST00000641272 SLC38A11Q08AI6 406 aa11.77□□□□□ -0.53
PHGDH-213ENST00000641272 RNF212Q495C1 297 aa11.77□□□□□ -0.53
PHGDH-213ENST00000641272 CCDC190Q86UF4 302 aa11.77□□□□□ -0.53
PHGDH-213ENST00000641272 ATG101Q9BSB4 218 aa11.77□□□□□ -0.53
PHGDH-213ENST00000641272 RYR1P21817 5038 aa11.77□□□□□ -0.53
PHGDH-213ENST00000641272 PLAC8L1A1L4L8 177 aa11.76□□□□□ -0.53
PHGDH-213ENST00000641272 PMS2P5A8MQ11 134 aa11.76□□□□□ -0.53
PHGDH-213ENST00000641272 LYRM9A8MSI8 78 aa11.76□□□□□ -0.53
PHGDH-213ENST00000641272 F5H768 121 aa11.76□□□□□ -0.53
PHGDH-213ENST00000641272 HYPMO75409 117 aa11.76□□□□□ -0.53
PHGDH-213ENST00000641272 NUDT3O95989 172 aa11.76□□□□□ -0.53
PHGDH-213ENST00000641272 HTN1P15515 57 aa11.76□□□□□ -0.53
PHGDH-213ENST00000641272 RPL7P18124 248 aaKnown RBP11.76□□□□□ -0.53
PHGDH-213ENST00000641272 SOHLH1Q5JUK2 328 aa11.76□□□□□ -0.53
PHGDH-213ENST00000641272 C1orf134Q5TEV5 83 aa11.76□□□□□ -0.53
PHGDH-213ENST00000641272 C15orf53Q8NAA6 179 aa11.76□□□□□ -0.53
PHGDH-213ENST00000641272 ABCA13Q86UQ4 5058 aa11.76□□□□□ -0.53
PHGDH-213ENST00000641272 MUC4Q99102 2169 aa11.75□□□□□ -0.53
PHGDH-213ENST00000641272 CXCL3P19876 107 aa11.75□□□□□ -0.53
PHGDH-213ENST00000641272 S100A7P31151 101 aa11.75□□□□□ -0.53
PHGDH-213ENST00000641272 INPP1P49441 399 aa11.75□□□□□ -0.53
PHGDH-213ENST00000641272 UBE2MP61081 183 aaKnown RBP11.75□□□□□ -0.53
PHGDH-213ENST00000641272 OR8A1Q8NGG7 326 aa11.75□□□□□ -0.53
PHGDH-213ENST00000641272 LRRC20Q8TCA0 184 aa11.75□□□□□ -0.53
PHGDH-213ENST00000641272 PARD6GQ9BYG4 376 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-213ENST00000641272 SRRQ9GZT4 340 aa11.75□□□□□ -0.53
PHGDH-213ENST00000641272 ARL6Q9H0F7 186 aa11.75□□□□□ -0.53
PHGDH-213ENST00000641272 PPP1R14DQ9NXH3 145 aa11.75□□□□□ -0.53
PHGDH-213ENST00000641272 DLK1P80370 383 aa11.74□□□□□ -0.53
PHGDH-213ENST00000641272 ID3Q02535 119 aa11.74□□□□□ -0.53
PHGDH-213ENST00000641272 PSG3Q16557 428 aa11.74□□□□□ -0.53
PHGDH-213ENST00000641272 TRIQKQ629K1 86 aa11.74□□□□□ -0.53
PHGDH-213ENST00000641272 LINC01587Q99440 93 aa11.74□□□□□ -0.53
PHGDH-213ENST00000641272 A0A087X0K7 114 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms