RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 ANXA7P20073 488 aaKnown RBP9.94□□□□□ -0.82
LINC00339-211ENST00000641009 CYP2G1PQ6ZSU1 146 aa9.94□□□□□ -0.82
LINC00339-211ENST00000641009 TMEM144Q7Z5S9 345 aa9.94□□□□□ -0.82
LINC00339-211ENST00000641009 SDHCQ99643 169 aaPredicted RBP9.94□□□□□ -0.82
LINC00339-211ENST00000641009 C7orf50Q9BRJ6 194 aaKnown RBP9.94□□□□□ -0.82
LINC00339-211ENST00000641009 NDUFAF3Q9BU61 184 aa9.94□□□□□ -0.82
LINC00339-211ENST00000641009 PLA2G2EQ9NZK7 142 aa9.94□□□□□ -0.82
LINC00339-211ENST00000641009 GOLT1BQ9Y3E0 138 aa9.94□□□□□ -0.82
LINC00339-211ENST00000641009 NACAE9PAV3 2078 aa9.93□□□□□ -0.82
LINC00339-211ENST00000641009 PMS2P5A8MQ11 134 aa9.93□□□□□ -0.82
LINC00339-211ENST00000641009 IFNA21P01568 189 aa9.93□□□□□ -0.82
LINC00339-211ENST00000641009 IL5P05113 134 aa9.93□□□□□ -0.82
LINC00339-211ENST00000641009 BTCP35070 178 aa9.93□□□□□ -0.82
LINC00339-211ENST00000641009 FGL1Q08830 312 aa9.93□□□□□ -0.82
LINC00339-211ENST00000641009 FAM222AQ5U5X8 452 aa9.93□□□□□ -0.82
LINC00339-211ENST00000641009 RNF182Q8N6D2 247 aa9.93□□□□□ -0.82
LINC00339-211ENST00000641009 SLC25A39Q9BZJ4 359 aaPredicted RBP9.93□□□□□ -0.82
LINC00339-211ENST00000641009 DKK2Q9UBU2 259 aa9.93□□□□□ -0.82
LINC00339-211ENST00000641009 TRAV8-2A0A0B4J237 113 aa9.92□□□□□ -0.82
LINC00339-211ENST00000641009 A8MTW9 85 aa9.92□□□□□ -0.82
LINC00339-211ENST00000641009 H3BRN7 92 aa9.92□□□□□ -0.82
LINC00339-211ENST00000641009 SCGB1D2O95969 90 aa9.92□□□□□ -0.82
LINC00339-211ENST00000641009 METTL15P1P0C7V9 234 aa9.92□□□□□ -0.82
LINC00339-211ENST00000641009 RRAS2P62070 204 aaPredicted RBP9.92□□□□□ -0.82
LINC00339-211ENST00000641009 C4orf46Q504U0 113 aa9.92□□□□□ -0.82
LINC00339-211ENST00000641009 AMTNQ6UX39 209 aa9.92□□□□□ -0.82
LINC00339-211ENST00000641009 SMIM8Q96KF7 97 aa9.92□□□□□ -0.82
LINC00339-211ENST00000641009 GPR82Q96P67 336 aa9.92□□□□□ -0.82
LINC00339-211ENST00000641009 NIPSNAP3BQ9BS92 247 aa9.92□□□□□ -0.82
LINC00339-211ENST00000641009 PKD1P98161 4303 aa9.92□□□□□ -0.82
LINC00339-211ENST00000641009 LOC102723971A0A1B0GUV8 181 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 HBE1P02100 147 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 LINC00869P0C866 280 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 S100A7P31151 101 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 CNN1P51911 297 aaKnown RBP9.91□□□□□ -0.82
LINC00339-211ENST00000641009 RAP2BP61225 183 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 UHRF2Q96PU4 802 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 SHANK2-AS3Q9BTD1 123 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 HIGD1AQ9Y241 93 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 YTHDF2Q9Y5A9 579 aaKnown RBP9.91□□□□□ -0.82
LINC00339-211ENST00000641009 HERC2O95714 4834 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 CENPXA8MT69 81 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 M0R2Z0 102 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 HYPMO75409 117 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 PRM2P04554 102 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 OR5G3P0C626 314 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 P0DMU3 169 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 FAM231AP0DMU4 169 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 FAM231CP0DMU5 169 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 SPINK13Q1W4C9 94 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 RRN3P1Q2M238 152 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 IAH1Q2TAA2 248 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-211ENST00000641009 TMEM14EPQ6UXP3 125 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 POM121L12Q8N7R1 296 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 OR11H7Q8NGC8 314 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 IGF2BP2-AS1Q96M15 143 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 TMEM208Q9BTX3 173 aa9.91□□□□□ -0.82
LINC00339-211ENST00000641009 TEX48A0A1B0GUV7 120 aa9.9□□□□□ -0.83
LINC00339-211ENST00000641009 IL7P13232 177 aa9.9□□□□□ -0.83
LINC00339-211ENST00000641009 HTN3P15516 51 aa9.9□□□□□ -0.83
LINC00339-211ENST00000641009 PLP1P60201 277 aa9.9□□□□□ -0.83
LINC00339-211ENST00000641009 DLK1P80370 383 aa9.9□□□□□ -0.83
LINC00339-211ENST00000641009 SLC38A11Q08AI6 406 aa9.9□□□□□ -0.83
LINC00339-211ENST00000641009 ZBTB8BQ8NAP8 495 aaPredicted RBP9.9□□□□□ -0.83
LINC00339-211ENST00000641009 ZNF738Q8NE65 137 aa9.9□□□□□ -0.83
LINC00339-211ENST00000641009 PTTG2Q9NZH5 202 aa9.9□□□□□ -0.83
LINC00339-211ENST00000641009 GSKIPQ9P0R6 139 aa9.9□□□□□ -0.83
LINC00339-211ENST00000641009 RCL1Q9Y2P8 373 aaKnown RBP9.9□□□□□ -0.83
LINC00339-211ENST00000641009 M0R2N4 97 aa9.89□□□□□ -0.83
LINC00339-211ENST00000641009 CRXO43186 299 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-211ENST00000641009 DUSP14O95147 198 aaKnown RBP9.89□□□□□ -0.83
LINC00339-211ENST00000641009 PRB4P10163 310 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-211ENST00000641009 RPL7P18124 248 aaKnown RBP9.89□□□□□ -0.83
LINC00339-211ENST00000641009 SELENOTP62341 195 aa9.89□□□□□ -0.83
LINC00339-211ENST00000641009 PATE2Q6UY27 113 aa9.89□□□□□ -0.83
LINC00339-211ENST00000641009 OR10P1Q8NGE3 313 aa9.89□□□□□ -0.83
LINC00339-211ENST00000641009 MITD1Q8WV92 249 aa9.89□□□□□ -0.83
LINC00339-211ENST00000641009 ARL6Q9H0F7 186 aa9.89□□□□□ -0.83
LINC00339-211ENST00000641009 NPVFQ9HCQ7 196 aa9.89□□□□□ -0.83
LINC00339-211ENST00000641009 KIAA1109Q2LD37 5005 aa9.88□□□□□ -0.83
LINC00339-211ENST00000641009 ZNF705GA8MUZ8 300 aaPredicted RBP9.88□□□□□ -0.83
LINC00339-211ENST00000641009 FNDC10F2Z333 226 aa9.88□□□□□ -0.83
LINC00339-211ENST00000641009 TSC22D2O75157 780 aa9.88□□□□□ -0.83
LINC00339-211ENST00000641009 ARL16Q0P5N6 197 aa9.88□□□□□ -0.83
LINC00339-211ENST00000641009 TEPPQ6URK8 271 aa9.88□□□□□ -0.83
LINC00339-211ENST00000641009 BAP18Q8IXM2 172 aa9.88□□□□□ -0.83
LINC00339-211ENST00000641009 MGAT4CQ9UBM8 478 aa9.88□□□□□ -0.83
LINC00339-211ENST00000641009 TRAV12-2A0A075B6T6 113 aa9.87□□□□□ -0.83
LINC00339-211ENST00000641009 CCSO14618 274 aa9.87□□□□□ -0.83
LINC00339-211ENST00000641009 INSP01308 110 aa9.87□□□□□ -0.83
LINC00339-211ENST00000641009 MBPP02686 304 aaPredicted RBP9.87□□□□□ -0.83
LINC00339-211ENST00000641009 TAS2R30P59541 319 aa9.87□□□□□ -0.83
LINC00339-211ENST00000641009 DAD1P61803 113 aa9.87□□□□□ -0.83
LINC00339-211ENST00000641009 OXA1LQ15070 435 aa9.87□□□□□ -0.83
LINC00339-211ENST00000641009 FAM210BQ96KR6 192 aa9.87□□□□□ -0.83
LINC00339-211ENST00000641009 C20orf85Q9H1P6 137 aa9.87□□□□□ -0.83
LINC00339-211ENST00000641009 ARV1Q9H2C2 271 aa9.87□□□□□ -0.83
LINC00339-211ENST00000641009 A0A087X0K7 114 aa9.86□□□□□ -0.83
LINC00339-211ENST00000641009 C7orf66A4D0T2 115 aa9.86□□□□□ -0.83
LINC00339-211ENST00000641009 K7EPK0 472 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms