RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	RTL8C	O15255	209 aa		10.45	□□□□□ -0.74
TARDBP-231	ENST00000639599	RPL7	P18124	248 aa	Known RBP	10.45	□□□□□ -0.74
TARDBP-231	ENST00000639599	CNN1	P51911	297 aa	Known RBP	10.45	□□□□□ -0.74
TARDBP-231	ENST00000639599	RHOB	P62745	196 aa		10.45	□□□□□ -0.74
TARDBP-231	ENST00000639599	C1orf134	Q5TEV5	83 aa		10.45	□□□□□ -0.74
TARDBP-231	ENST00000639599	ACOT7L	Q6ZUV0	252 aa		10.45	□□□□□ -0.74
TARDBP-231	ENST00000639599	LRTM2	Q8N967	370 aa		10.45	□□□□□ -0.74
TARDBP-231	ENST00000639599	C20orf173	Q96LM9	149 aa		10.45	□□□□□ -0.74
TARDBP-231	ENST00000639599	SLIRP	Q9GZT3	109 aa	Known RBP	10.45	□□□□□ -0.74
TARDBP-231	ENST00000639599	RNF24	Q9Y225	148 aa		10.45	□□□□□ -0.74
TARDBP-231	ENST00000639599	HIGD1A	Q9Y241	93 aa		10.45	□□□□□ -0.74
TARDBP-231	ENST00000639599	IGKV1OR2-108	A0A075B7D4	117 aa		10.44	□□□□□ -0.74
TARDBP-231	ENST00000639599	LYRM9	A8MSI8	78 aa		10.44	□□□□□ -0.74
TARDBP-231	ENST00000639599		H3BMQ9	156 aa		10.44	□□□□□ -0.74
TARDBP-231	ENST00000639599		M0R2Z0	102 aa		10.44	□□□□□ -0.74
TARDBP-231	ENST00000639599	OR5G3	P0C626	314 aa		10.44	□□□□□ -0.74
TARDBP-231	ENST00000639599	DEFB130B	P0DP73	79 aa		10.44	□□□□□ -0.74
TARDBP-231	ENST00000639599	DEFB130A	P0DP74	79 aa		10.44	□□□□□ -0.74
TARDBP-231	ENST00000639599	GATA2	P23769	480 aa	Predicted RBP	10.44	□□□□□ -0.74
TARDBP-231	ENST00000639599	PPP1R1A	Q13522	171 aa		10.44	□□□□□ -0.74
TARDBP-231	ENST00000639599	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.44	□□□□□ -0.74
TARDBP-231	ENST00000639599	DEDD2	Q8WXF8	326 aa		10.44	□□□□□ -0.74
TARDBP-231	ENST00000639599	HERC2	O95714	4834 aa		10.44	□□□□□ -0.74
TARDBP-231	ENST00000639599		A0A1B0GVY2	172 aa		10.43	□□□□□ -0.74
TARDBP-231	ENST00000639599	ZNF705G	A8MUZ8	300 aa	Predicted RBP	10.43	□□□□□ -0.74
TARDBP-231	ENST00000639599	BOLA2-SMG1P6	H3BVE0	249 aa		10.43	□□□□□ -0.74
TARDBP-231	ENST00000639599	HYPM	O75409	117 aa		10.43	□□□□□ -0.74
TARDBP-231	ENST00000639599	FAM3B	P58499	235 aa	Predicted RBP	10.43	□□□□□ -0.74
TARDBP-231	ENST00000639599	HIST1H1A	Q02539	215 aa	Predicted RBP	10.43	□□□□□ -0.74
TARDBP-231	ENST00000639599	CYP2G1P	Q6ZSU1	146 aa		10.43	□□□□□ -0.74
TARDBP-231	ENST00000639599	TMEM144	Q7Z5S9	345 aa		10.43	□□□□□ -0.74
TARDBP-231	ENST00000639599	OR11H7	Q8NGC8	314 aa		10.43	□□□□□ -0.74
TARDBP-231	ENST00000639599	LINC01587	Q99440	93 aa		10.43	□□□□□ -0.74
TARDBP-231	ENST00000639599	PSENEN	Q9NZ42	101 aa		10.43	□□□□□ -0.74
TARDBP-231	ENST00000639599		F5H768	121 aa		10.42	□□□□□ -0.74
TARDBP-231	ENST00000639599	NUDT3	O95989	172 aa		10.42	□□□□□ -0.74
TARDBP-231	ENST00000639599	LINC00869	P0C866	280 aa		10.42	□□□□□ -0.74
TARDBP-231	ENST00000639599	HTN1	P15515	57 aa		10.42	□□□□□ -0.74
TARDBP-231	ENST00000639599	ANXA7	P20073	488 aa	Known RBP	10.42	□□□□□ -0.74
TARDBP-231	ENST00000639599	IGFL4	Q6B9Z1	124 aa		10.42	□□□□□ -0.74
TARDBP-231	ENST00000639599	BAP18	Q8IXM2	172 aa		10.42	□□□□□ -0.74
TARDBP-231	ENST00000639599	RNF182	Q8N6D2	247 aa		10.42	□□□□□ -0.74
TARDBP-231	ENST00000639599	TRIM63	Q969Q1	353 aa		10.42	□□□□□ -0.74
TARDBP-231	ENST00000639599	SOST	Q9BQB4	213 aa		10.42	□□□□□ -0.74
TARDBP-231	ENST00000639599	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.42	□□□□□ -0.74
TARDBP-231	ENST00000639599	MGAT4C	Q9UBM8	478 aa		10.42	□□□□□ -0.74
TARDBP-231	ENST00000639599		H3BRN7	92 aa		10.41	□□□□□ -0.74
TARDBP-231	ENST00000639599	SSSCA1	O60232	199 aa		10.41	□□□□□ -0.74
TARDBP-231	ENST00000639599	SCGB1D2	O95969	90 aa		10.41	□□□□□ -0.74
TARDBP-231	ENST00000639599	UBE2M	P61081	183 aa	Known RBP	10.41	□□□□□ -0.74
TARDBP-231	ENST00000639599	RRAS2	P62070	204 aa	Predicted RBP	10.41	□□□□□ -0.74
TARDBP-231	ENST00000639599	SELENOT	P62341	195 aa		10.41	□□□□□ -0.74
TARDBP-231	ENST00000639599	TRIQK	Q629K1	86 aa		10.41	□□□□□ -0.74
TARDBP-231	ENST00000639599	TMEM256	Q8N2U0	113 aa		10.41	□□□□□ -0.74
TARDBP-231	ENST00000639599	SHANK2-AS3	Q9BTD1	123 aa		10.41	□□□□□ -0.74
TARDBP-231	ENST00000639599	DNAH10	Q8IVF4	4471 aa		10.4	□□□□□ -0.74
TARDBP-231	ENST00000639599	TRAV12-2	A0A075B6T6	113 aa		10.4	□□□□□ -0.74
TARDBP-231	ENST00000639599	CCL18	P55774	89 aa		10.4	□□□□□ -0.74
TARDBP-231	ENST00000639599	POLR2G	P62487	172 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
TARDBP-231	ENST00000639599	CLINT1	Q14677	625 aa		10.4	□□□□□ -0.74
TARDBP-231	ENST00000639599	SPANXN2	Q5MJ10	180 aa		10.4	□□□□□ -0.74
TARDBP-231	ENST00000639599	AMTN	Q6UX39	209 aa		10.4	□□□□□ -0.74
TARDBP-231	ENST00000639599	HECTD4	Q9Y4D8	3996 aa		10.39	□□□□□ -0.75
TARDBP-231	ENST00000639599		A8MTW9	85 aa		10.39	□□□□□ -0.75
TARDBP-231	ENST00000639599	PRSS46	E5RG02	174 aa		10.39	□□□□□ -0.75
TARDBP-231	ENST00000639599	ATP5G1	P05496	136 aa		10.39	□□□□□ -0.75
TARDBP-231	ENST00000639599	TSPO	P30536	169 aa		10.39	□□□□□ -0.75
TARDBP-231	ENST00000639599	ATP5G3	P48201	142 aa		10.39	□□□□□ -0.75
TARDBP-231	ENST00000639599	C4orf46	Q504U0	113 aa		10.39	□□□□□ -0.75
TARDBP-231	ENST00000639599		Q6ZR54	194 aa		10.39	□□□□□ -0.75
TARDBP-231	ENST00000639599	OR10P1	Q8NGE3	313 aa		10.39	□□□□□ -0.75
TARDBP-231	ENST00000639599	C16orf74	Q96GX8	76 aa		10.39	□□□□□ -0.75
TARDBP-231	ENST00000639599	ARL6	Q9H0F7	186 aa		10.39	□□□□□ -0.75
TARDBP-231	ENST00000639599	C9orf170	A2RU37	121 aa		10.38	□□□□□ -0.75
TARDBP-231	ENST00000639599	NAP1L6	A6NFF2	107 aa		10.38	□□□□□ -0.75
TARDBP-231	ENST00000639599	ADAP1	O75689	374 aa		10.38	□□□□□ -0.75
TARDBP-231	ENST00000639599	TAS2R60	P59551	318 aa		10.38	□□□□□ -0.75
TARDBP-231	ENST00000639599	DLK1	P80370	383 aa		10.38	□□□□□ -0.75
TARDBP-231	ENST00000639599	TMEM182	Q6ZP80	229 aa	Predicted RBP	10.38	□□□□□ -0.75
TARDBP-231	ENST00000639599	OR8A1	Q8NGG7	326 aa		10.38	□□□□□ -0.75
TARDBP-231	ENST00000639599	NPVF	Q9HCQ7	196 aa		10.38	□□□□□ -0.75
TARDBP-231	ENST00000639599		V9GYH0	126 aa		10.38	□□□□□ -0.75
TARDBP-231	ENST00000639599	DNAH6	Q9C0G6	4158 aa		10.37	□□□□□ -0.75
TARDBP-231	ENST00000639599	TRAV8-2	A0A0B4J237	113 aa		10.37	□□□□□ -0.75
TARDBP-231	ENST00000639599	CENPX	A8MT69	81 aa		10.37	□□□□□ -0.75
TARDBP-231	ENST00000639599	GOSR2	O14653	212 aa		10.37	□□□□□ -0.75
TARDBP-231	ENST00000639599	METTL15P1	P0C7V9	234 aa		10.37	□□□□□ -0.75
TARDBP-231	ENST00000639599	CXCL3	P19876	107 aa		10.37	□□□□□ -0.75
TARDBP-231	ENST00000639599	PSG3	Q16557	428 aa		10.37	□□□□□ -0.75
TARDBP-231	ENST00000639599	TEPP	Q6URK8	271 aa		10.37	□□□□□ -0.75
TARDBP-231	ENST00000639599	ZNF546	Q86UE3	836 aa		10.37	□□□□□ -0.75
TARDBP-231	ENST00000639599	CCDC28A	Q8IWP9	274 aa		10.37	□□□□□ -0.75
TARDBP-231	ENST00000639599	OR10J6P	Q8NGY7	276 aa		10.37	□□□□□ -0.75
TARDBP-231	ENST00000639599	UHRF2	Q96PU4	802 aa		10.37	□□□□□ -0.75
TARDBP-231	ENST00000639599	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.37	□□□□□ -0.75
TARDBP-231	ENST00000639599	VPS13D	Q5THJ4	4388 aa		10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599		A0A087X0K7	114 aa		10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599	CBY3	A6NI87	242 aa		10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599	CRX	O43186	299 aa	Predicted RBP	10.36	□□□□□ -0.75
TARDBP-231	ENST00000639599	COX7A2P2	O60397	106 aa		10.36	□□□□□ -0.75

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