RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 RNF24Q9Y225 148 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 IGLC1P0CG04 106 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 BSPH1Q075Z2 132 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 C16orf54Q6UWD8 224 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 C17orf77Q96MU5 243 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 SIGLEC9Q9Y336 463 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 F11RQ9Y624 299 aaKnown RBP8.67□□□□□ -1.02
SNIP1-204ENST00000638725 A0A1B0GUT8 65 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 TEX22C9J3V5 150 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 HLA-DRB1P01911 266 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 CRYGBP07316 175 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 COTL1Q14019 142 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 LINC01545Q5VT33 79 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 C12orf54Q6X4T0 127 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 PRSS33Q8NF86 280 aa8.67□□□□□ -1.02
SNIP1-204ENST00000638725 PKDREJQ9NTG1 2253 aa8.66□□□□□ -1.02
SNIP1-204ENST00000638725 K7EM74 188 aa8.66□□□□□ -1.02
SNIP1-204ENST00000638725 SNAI2O43623 268 aa8.66□□□□□ -1.02
SNIP1-204ENST00000638725 NCR2O95944 276 aa8.66□□□□□ -1.02
SNIP1-204ENST00000638725 RBP4P02753 201 aa8.66□□□□□ -1.02
SNIP1-204ENST00000638725 HOXB4P17483 251 aaPredicted RBP8.66□□□□□ -1.02
SNIP1-204ENST00000638725 MS4A6AQ9H2W1 248 aa8.66□□□□□ -1.02
SNIP1-204ENST00000638725 AP5S1Q9NUS5 200 aa8.66□□□□□ -1.02
SNIP1-204ENST00000638725 ARF6P62330 175 aa8.66□□□□□ -1.02
SNIP1-204ENST00000638725 AMMECR1LQ6DCA0 310 aa8.66□□□□□ -1.02
SNIP1-204ENST00000638725 TPPP3Q9BW30 176 aa8.66□□□□□ -1.02
SNIP1-204ENST00000638725 TMEM133Q9H2Q1 129 aa8.66□□□□□ -1.02
SNIP1-204ENST00000638725 FBXL15Q9H469 300 aa8.66□□□□□ -1.02
SNIP1-204ENST00000638725 TMEM14CQ9P0S9 112 aa8.66□□□□□ -1.02
SNIP1-204ENST00000638725 HIST1H1AQ02539 215 aaPredicted RBP8.65□□□□□ -1.02
SNIP1-204ENST00000638725 PIP4P1Q86T03 277 aa8.65□□□□□ -1.02
SNIP1-204ENST00000638725 PPP1R27Q86WC6 154 aa8.65□□□□□ -1.02
SNIP1-204ENST00000638725 RASL11BQ9BPW5 248 aa8.65□□□□□ -1.02
SNIP1-204ENST00000638725 ZNF747Q9BV97 191 aa8.65□□□□□ -1.02
SNIP1-204ENST00000638725 FAM106CPP0CH98 169 aa8.65□□□□□ -1.03
SNIP1-204ENST00000638725 RIGQ13278 110 aa8.65□□□□□ -1.03
SNIP1-204ENST00000638725 FAM106AQ4KMX7 169 aa8.65□□□□□ -1.03
SNIP1-204ENST00000638725 LDLRAD2Q5SZI1 272 aa8.65□□□□□ -1.03
SNIP1-204ENST00000638725 Q6ZS92 163 aa8.65□□□□□ -1.03
SNIP1-204ENST00000638725 MALRD1Q5VYJ5 2156 aa8.65□□□□□ -1.03
SNIP1-204ENST00000638725 C16orf97H3BN30 126 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 I3L2K1 104 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 KLK10O43240 276 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 IGKV1-17P01599 117 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 THBDP07204 575 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 GPR183P32249 361 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 PAX2Q02962 417 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 SAPCD1Q5SSQ6 148 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 C2orf91Q6ZV80 131 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 FA2HQ7L5A8 372 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 FAM57AQ8TBR7 257 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 NGBQ9NPG2 151 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 INSIG2Q9Y5U4 225 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 TRBV19A0A075B6N1 114 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 TRAV8-6A0A0B4J262 113 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 IGHV1-3A0A0C4DH29 117 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 COX8AP10176 69 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 CRIP1P50238 77 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 PSG9Q00887 426 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 LOXL1Q08397 574 aaPredicted RBP8.64□□□□□ -1.03
SNIP1-204ENST00000638725 IGFL3Q6UXB1 125 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 ASCL5Q7RTU5 278 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 PRSS3P2Q8NHM4 247 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 CST9LQ9H4G1 147 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 PSG8Q9UQ74 426 aa8.64□□□□□ -1.03
SNIP1-204ENST00000638725 A0A0G2JNJ9 132 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 CD5LO43866 347 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 RBPJQ06330 500 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 Q9UFV3 132 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 LAMA5O15230 3695 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 M0R3E3 92 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 SIGLEC15Q6ZMC9 328 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 TMEM75Q8N9X5 138 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 OR10AG1Q8NH19 301 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 RNASE6Q93091 150 aaKnown RBP8.63□□□□□ -1.03
SNIP1-204ENST00000638725 C8orf49Q96NF6 230 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 SCNM1Q9BWG6 230 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 KAAG1Q9UBP8 84 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 SH3BGRL2Q9UJC5 107 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 DMXL2Q8TDJ6 3036 aa8.63□□□□□ -1.03
SNIP1-204ENST00000638725 A0A096LNJ9 63 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 TRBV6-1A0A0K0K1D8 114 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 LOC389332A0A1B0GUA5 103 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 IGLV1-47P01700 117 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 IFI27P40305 119 aaPredicted RBP8.62□□□□□ -1.03
SNIP1-204ENST00000638725 CSN1S1P47710 185 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 BPIFA4PQ86YQ2 179 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 GATD1Q8NB37 220 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 OR8A1Q8NGG7 326 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 SHANK2-AS3Q9BTD1 123 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 DYNLRB1Q9NP97 96 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 CEP250Q9BV73 2442 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 H3BRN7 92 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 COX7A1P24310 79 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 PLGLAQ15195 96 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 PSG3Q16557 428 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 PIP4P2Q8N4L2 257 aa8.62□□□□□ -1.03
SNIP1-204ENST00000638725 TMSB15BA0A087X1C1 80 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 SERTM2A0A1B0GWG4 89 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 TMEM213A2RRL7 107 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms