RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 GP9P14770 177 aa11.16□□□□□ -0.62
CACNA1A-228ENST00000636610 MC5RP33032 325 aa11.16□□□□□ -0.62
CACNA1A-228ENST00000636610 C7orf69Q9H7B7 122 aa11.16□□□□□ -0.62
CACNA1A-228ENST00000636610 RASL11BQ9BPW5 248 aa11.16□□□□□ -0.62
CACNA1A-228ENST00000636610 PPIAL4CA0A0B4J2A2 164 aa11.15□□□□□ -0.62
CACNA1A-228ENST00000636610 PPIAL4GP0DN37 164 aa11.15□□□□□ -0.62
CACNA1A-228ENST00000636610 BTF3P20290 206 aaKnown RBP11.15□□□□□ -0.62
CACNA1A-228ENST00000636610 MYCNOSP40205 109 aa11.15□□□□□ -0.62
CACNA1A-228ENST00000636610 ATP5IP56385 69 aaPredicted RBP11.15□□□□□ -0.62
CACNA1A-228ENST00000636610 C5orf17Q8NAS9 161 aa11.15□□□□□ -0.62
CACNA1A-228ENST00000636610 SLC25A39Q9BZJ4 359 aaPredicted RBP11.15□□□□□ -0.62
CACNA1A-228ENST00000636610 TIMM23O14925 209 aa11.15□□□□□ -0.62
CACNA1A-228ENST00000636610 TSPOP30536 169 aa11.15□□□□□ -0.62
CACNA1A-228ENST00000636610 CA7P43166 264 aa11.15□□□□□ -0.62
CACNA1A-228ENST00000636610 LGALS7P47929 136 aa11.15□□□□□ -0.62
CACNA1A-228ENST00000636610 A8MWL6 223 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 NDUFB8O95169 186 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 FCGR2BP31994 310 aaPredicted RBP11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 LOC389332A0A1B0GUA5 103 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 C2orf70A6NJV1 201 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 VSTM5A8MXK1 200 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 BUB1B-PAK6H3BSN5 160 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 IL4P05112 153 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 FAM231DQ6ZW35 169 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 OR4C46A6NHA9 309 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 TEX22C9J3V5 150 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 ARMS2P0C7Q2 107 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 IGLC1P0CG04 106 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 C3orf36Q3SXR2 165 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 COX19Q49B96 90 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 C8orf46Q8TAG6 207 aa11.14□□□□□ -0.63
CACNA1A-228ENST00000636610 IGHV1-24A0A0C4DH33 117 aa11.13□□□□□ -0.63
CACNA1A-228ENST00000636610 SERTM2A0A1B0GWG4 89 aa11.13□□□□□ -0.63
CACNA1A-228ENST00000636610 FOXC1Q12948 553 aa11.13□□□□□ -0.63
CACNA1A-228ENST00000636610 TMEM116Q8NCL8 245 aa11.13□□□□□ -0.63
CACNA1A-228ENST00000636610 OR4A5Q8NH83 315 aa11.13□□□□□ -0.63
CACNA1A-228ENST00000636610 F11RQ9Y624 299 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-228ENST00000636610 HTR1DP28221 377 aa11.13□□□□□ -0.63
CACNA1A-228ENST00000636610 ZNF596Q8TC21 504 aa11.13□□□□□ -0.63
CACNA1A-228ENST00000636610 MLST8Q9BVC4 326 aa11.13□□□□□ -0.63
CACNA1A-228ENST00000636610 TNFRSF13BO14836 293 aaPredicted RBP11.12□□□□□ -0.63
CACNA1A-228ENST00000636610 LEPROTL1O95214 131 aa11.12□□□□□ -0.63
CACNA1A-228ENST00000636610 IGKV1-17P01599 117 aa11.12□□□□□ -0.63
CACNA1A-228ENST00000636610 TMEM30BQ3MIR4 351 aa11.12□□□□□ -0.63
CACNA1A-228ENST00000636610 ZC2HC1AQ96GY0 325 aa11.12□□□□□ -0.63
CACNA1A-228ENST00000636610 TRGV9Q99603 122 aa11.12□□□□□ -0.63
CACNA1A-228ENST00000636610 LTAP01374 205 aa11.12□□□□□ -0.63
CACNA1A-228ENST00000636610 CRYGCP07315 174 aa11.12□□□□□ -0.63
CACNA1A-228ENST00000636610 MUC15Q8N387 334 aa11.12□□□□□ -0.63
CACNA1A-228ENST00000636610 STXBP6Q8NFX7 210 aa11.12□□□□□ -0.63
CACNA1A-228ENST00000636610 TMEM70Q9BUB7 260 aa11.12□□□□□ -0.63
CACNA1A-228ENST00000636610 TMUB1Q9BVT8 246 aa11.12□□□□□ -0.63
CACNA1A-228ENST00000636610 A0A1B0GXF2 115 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 NCBP2LA6PVI3 153 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 TOMM40O96008 361 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 Q86TA4 180 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 KLHDC1Q8N7A1 406 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 C8orf49Q96NF6 230 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 MRPL27Q9P0M9 148 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 VPS13CQ709C8 3753 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 TRAV9-2A0A087WT02 112 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 IGLV1-47P01700 117 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 CD3EP07766 207 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 LINC00311Q8N616 119 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 TEX45Q8NA69 505 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 WIPF2Q8TF74 440 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 RBM14Q96PK6 669 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 IGHV3OR16-13A0A075B7E8 117 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 IGHV3-74A0A0B4J1X5 117 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 FAM106CPP0CH98 169 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 FAM106AQ4KMX7 169 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 RBPMS2Q6ZRY4 209 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 ASCL5Q7RTU5 278 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 OR8B3Q8NGG8 313 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 FMC1Q96HJ9 113 aa11.11□□□□□ -0.63
CACNA1A-228ENST00000636610 LINC00614P0C842 121 aa11.1□□□□□ -0.63
CACNA1A-228ENST00000636610 PTTG1IPP53801 180 aa11.1□□□□□ -0.63
CACNA1A-228ENST00000636610 CDSNQ15517 529 aa11.1□□□□□ -0.63
CACNA1A-228ENST00000636610 MPV17L2Q567V2 206 aa11.1□□□□□ -0.63
CACNA1A-228ENST00000636610 KLF12Q9Y4X4 402 aa11.1□□□□□ -0.63
CACNA1A-228ENST00000636610 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.1□□□□□ -0.63
CACNA1A-228ENST00000636610 APOBEC3AP31941 199 aaPredicted RBP11.1□□□□□ -0.63
CACNA1A-228ENST00000636610 TCF15Q12870 199 aa11.1□□□□□ -0.63
CACNA1A-228ENST00000636610 WFDC3Q8IUB2 231 aa11.1□□□□□ -0.63
CACNA1A-228ENST00000636610 ZNF785A8K8V0 405 aa11.09□□□□□ -0.63
CACNA1A-228ENST00000636610 PRSS22Q9GZN4 317 aa11.09□□□□□ -0.63
CACNA1A-228ENST00000636610 ZFP30Q9Y2G7 519 aa11.09□□□□□ -0.63
CACNA1A-228ENST00000636610 C19orf71A6NCJ1 209 aa11.09□□□□□ -0.63
CACNA1A-228ENST00000636610 INS-IGF2F8WCM5 200 aa11.09□□□□□ -0.63
CACNA1A-228ENST00000636610 I3L2K1 104 aa11.09□□□□□ -0.63
CACNA1A-228ENST00000636610 IGLV2-11P01706 119 aa11.09□□□□□ -0.63
CACNA1A-228ENST00000636610 FOXE3Q13461 319 aa11.09□□□□□ -0.63
CACNA1A-228ENST00000636610 Q8TAT8 98 aa11.09□□□□□ -0.63
CACNA1A-228ENST00000636610 CHRDL1Q9BU40 450 aa11.09□□□□□ -0.63
CACNA1A-228ENST00000636610 CCL25O15444 150 aa11.09□□□□□ -0.63
CACNA1A-228ENST00000636610 FAM120AOSQ5T036 256 aa11.09□□□□□ -0.63
CACNA1A-228ENST00000636610 NGBQ9NPG2 151 aa11.09□□□□□ -0.63
CACNA1A-228ENST00000636610 HIVEP3Q5T1R4 2406 aa11.08□□□□□ -0.64
CACNA1A-228ENST00000636610 LOC102724200A0A096LPH7 203 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms