RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SLC35B3Q9H1N7 401 aa12.89□□□□□ -0.35
PNKP-225ENST00000636214 GSKIPQ9P0R6 139 aa12.89□□□□□ -0.35
PNKP-225ENST00000636214 RNF24Q9Y225 148 aa12.89□□□□□ -0.35
PNKP-225ENST00000636214 DUSP14O95147 198 aaKnown RBP12.88□□□□□ -0.35
PNKP-225ENST00000636214 AMBPP02760 352 aa12.88□□□□□ -0.35
PNKP-225ENST00000636214 LINC00869P0C866 280 aa12.88□□□□□ -0.35
PNKP-225ENST00000636214 DLK1P80370 383 aa12.88□□□□□ -0.35
PNKP-225ENST00000636214 ZNF846Q147U1 533 aa12.88□□□□□ -0.35
PNKP-225ENST00000636214 ZNF709Q8N972 641 aa12.88□□□□□ -0.35
PNKP-225ENST00000636214 SLC25A39Q9BZJ4 359 aaPredicted RBP12.88□□□□□ -0.35
PNKP-225ENST00000636214 H3BRN7 92 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 METTL15P1P0C7V9 234 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 IL7P13232 177 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 PRR20EP86478 221 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 PRR20CP86479 221 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 PRR20DP86480 221 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 PRR20BP86481 221 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 PRR20AP86496 221 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 RRN3P1Q2M238 152 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 GSG1LQ6UXU4 331 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 TMEM182Q6ZP80 229 aaPredicted RBP12.87□□□□□ -0.35
PNKP-225ENST00000636214 ZNF738Q8NE65 137 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 LRRC20Q8TCA0 184 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 C20orf173Q96LM9 149 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 SCRT1Q9BWW7 348 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 NPVFQ9HCQ7 196 aa12.87□□□□□ -0.35
PNKP-225ENST00000636214 FRAS1Q86XX4 4008 aa12.86□□□□□ -0.35
PNKP-225ENST00000636214 FNDC10F2Z333 226 aa12.86□□□□□ -0.35
PNKP-225ENST00000636214 L7N2F9 121 aa12.86□□□□□ -0.35
PNKP-225ENST00000636214 TSC22D2O75157 780 aa12.86□□□□□ -0.35
PNKP-225ENST00000636214 P0DMU3 169 aa12.86□□□□□ -0.35
PNKP-225ENST00000636214 FAM231AP0DMU4 169 aa12.86□□□□□ -0.35
PNKP-225ENST00000636214 FAM231CP0DMU5 169 aa12.86□□□□□ -0.35
PNKP-225ENST00000636214 TAS2R30P59541 319 aa12.86□□□□□ -0.35
PNKP-225ENST00000636214 VAMP2P63027 116 aa12.86□□□□□ -0.35
PNKP-225ENST00000636214 ZBTB8BQ8NAP8 495 aaPredicted RBP12.86□□□□□ -0.35
PNKP-225ENST00000636214 SHANK2-AS3Q9BTD1 123 aa12.86□□□□□ -0.35
PNKP-225ENST00000636214 PPP1R14DQ9NXH3 145 aa12.86□□□□□ -0.35
PNKP-225ENST00000636214 LOC102723971A0A1B0GUV8 181 aa12.85□□□□□ -0.35
PNKP-225ENST00000636214 INSP01308 110 aa12.85□□□□□ -0.35
PNKP-225ENST00000636214 BTCP35070 178 aa12.85□□□□□ -0.35
PNKP-225ENST00000636214 TEPPQ6URK8 271 aa12.85□□□□□ -0.35
PNKP-225ENST00000636214 TMEM14EPQ6UXP3 125 aa12.85□□□□□ -0.35
PNKP-225ENST00000636214 MITD1Q8WV92 249 aa12.85□□□□□ -0.35
PNKP-225ENST00000636214 SDHCQ99643 169 aaPredicted RBP12.85□□□□□ -0.35
PNKP-225ENST00000636214 NIPSNAP3BQ9BS92 247 aa12.85□□□□□ -0.35
PNKP-225ENST00000636214 C20orf85Q9H1P6 137 aa12.85□□□□□ -0.35
PNKP-225ENST00000636214 NDUFA13Q9P0J0 144 aa12.85□□□□□ -0.35
PNKP-225ENST00000636214 VPS13DQ5THJ4 4388 aa12.84□□□□□ -0.35
PNKP-225ENST00000636214 FAM25EA8MYX2 175 aa12.84□□□□□ -0.35
PNKP-225ENST00000636214 GOSR2O14653 212 aa12.84□□□□□ -0.35
PNKP-225ENST00000636214 LYRM1O43325 122 aa12.84□□□□□ -0.35
PNKP-225ENST00000636214 PLP1P60201 277 aa12.84□□□□□ -0.35
PNKP-225ENST00000636214 FAM222AQ5U5X8 452 aa12.84□□□□□ -0.35
PNKP-225ENST00000636214 ZNF546Q86UE3 836 aa12.84□□□□□ -0.35
PNKP-225ENST00000636214 IGF2BP2-AS1Q96M15 143 aa12.84□□□□□ -0.35
PNKP-225ENST00000636214 ARL6Q9H0F7 186 aa12.84□□□□□ -0.35
PNKP-225ENST00000636214 DKK2Q9UBU2 259 aa12.84□□□□□ -0.35
PNKP-225ENST00000636214 CCNKO75909 580 aa12.83□□□□□ -0.36
PNKP-225ENST00000636214 CNN1P51911 297 aaKnown RBP12.83□□□□□ -0.36
PNKP-225ENST00000636214 SLC38A11Q08AI6 406 aa12.83□□□□□ -0.36
PNKP-225ENST00000636214 PXDC1Q5TGL8 231 aa12.83□□□□□ -0.36
PNKP-225ENST00000636214 RNF182Q8N6D2 247 aa12.83□□□□□ -0.36
PNKP-225ENST00000636214 UHRF2Q96PU4 802 aa12.83□□□□□ -0.36
PNKP-225ENST00000636214 DNAH6Q9C0G6 4158 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 C5orf51A6NDU8 294 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 PMS2P5A8MQ11 134 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 HTN3P15516 51 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 BCAP31P51572 246 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 B2MP61769 119 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 DAD1P61803 113 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 RHOBP62745 196 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 HIST1H1AQ02539 215 aaPredicted RBP12.82□□□□□ -0.36
PNKP-225ENST00000636214 SPINK13Q1W4C9 94 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 IGFL4Q6B9Z1 124 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 UBE2DNLQ8IWF7 75 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 C1orf158Q8N1D5 194 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 FAM210BQ96KR6 192 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 ARV1Q9H2C2 271 aa12.82□□□□□ -0.36
PNKP-225ENST00000636214 RCL1Q9Y2P8 373 aaKnown RBP12.82□□□□□ -0.36
PNKP-225ENST00000636214 YTHDF2Q9Y5A9 579 aaKnown RBP12.82□□□□□ -0.36
PNKP-225ENST00000636214 DNAH10Q8IVF4 4471 aa12.81□□□□□ -0.36
PNKP-225ENST00000636214 M0R2Z0 102 aa12.81□□□□□ -0.36
PNKP-225ENST00000636214 RAB31Q13636 194 aa12.81□□□□□ -0.36
PNKP-225ENST00000636214 POM121L12Q8N7R1 296 aa12.81□□□□□ -0.36
PNKP-225ENST00000636214 OR11H7Q8NGC8 314 aa12.81□□□□□ -0.36
PNKP-225ENST00000636214 GGACTQ9BVM4 153 aa12.81□□□□□ -0.36
PNKP-225ENST00000636214 LSM5Q9Y4Y9 91 aaKnown RBP12.81□□□□□ -0.36
PNKP-225ENST00000636214 TRAV6A0A075B6T7 132 aa12.8□□□□□ -0.36
PNKP-225ENST00000636214 A0A087X0K7 114 aa12.8□□□□□ -0.36
PNKP-225ENST00000636214 TRAV8-2A0A0B4J237 113 aa12.8□□□□□ -0.36
PNKP-225ENST00000636214 A8MTW9 85 aa12.8□□□□□ -0.36
PNKP-225ENST00000636214 BOLA2-SMG1P6H3BVE0 249 aa12.8□□□□□ -0.36
PNKP-225ENST00000636214 K7EPK0 472 aa12.8□□□□□ -0.36
PNKP-225ENST00000636214 CCSO14618 274 aa12.8□□□□□ -0.36
PNKP-225ENST00000636214 COX7A2P2O60397 106 aa12.8□□□□□ -0.36
PNKP-225ENST00000636214 MBPP02686 304 aaPredicted RBP12.8□□□□□ -0.36
PNKP-225ENST00000636214 TCRBP04435 133 aa12.8□□□□□ -0.36
PNKP-225ENST00000636214 PVALBP20472 110 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms